Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025956 Carpinus fangiana HOM05D000216 ORTHO05D003518 0.0e+00 1102.8 554 100.0
arahy.Tifrunner.gnm1.ann1.77R9Y6 Arachis hypogaea HOM05D000216 ORTHO05D003638 2.0e-24 118.2 219 32.9
arahy.Tifrunner.gnm1.ann1.KPH33C Arachis hypogaea HOM05D000216 ORTHO05D003638 2.5e-24 117.9 219 32.9
Hund18044 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund27559 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund27611 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund27653 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund27865 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund27918 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund28152 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund28276 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund28388 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund28560 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund28651 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund28794 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund29351 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund29885 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund30206 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund30310 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund30432 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund30437 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
Hund30661 Selenicereus undatus HOM05D000216 ORTHO05D003518 2.5e-24 117.9 211 33.6
Hund30710 Selenicereus undatus HOM05D000216 ORTHO05D003518 2.5e-24 117.9 211 33.6
Hund30852 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-24 117.9 211 33.6
arahy.Tifrunner.gnm1.ann1.49E3RC Arachis hypogaea HOM05D000216 ORTHO05D003638 3.3e-24 117.5 219 32.9
Hund27995 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.3e-24 117.1 228 32.9
Hund29741 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.3e-24 117.1 228 32.9
AL2G20950 Arabidopsis lyrata HOM05D000216 ORTHO05D003518 7.4e-24 116.3 209 34.9
ATCG00160 Arabidopsis thaliana HOM05D000216 ORTHO05D003518 7.4e-24 116.3 220 34.1
Hund03957 Selenicereus undatus HOM05D000216 ORTHO05D003638 7.4e-24 116.3 211 33.6
DCAR_032473 Daucus carota HOM05D000216 ORTHO05D003518 9.7e-24 115.9 220 33.6
Atru.chr13.1804 Acer truncatum HOM05D000216 ORTHO05D003518 1.3e-23 115.5 219 34.2
Atru.chr13.1817 Acer truncatum HOM05D000216 ORTHO05D003518 1.3e-23 115.5 219 34.2
BcaC05g28802 Brassica carinata HOM05D000216 ORTHO05D003518 1.3e-23 115.5 220 33.6
BNapus_Darmor_BZH_scaffold_253p00050 Brassica napus HOM05D000216 ORTHO05D003518 1.3e-23 115.5 220 33.6
BolSC37t60769H Brassica oleracea HOM05D000216 ORTHO05D003518 1.3e-23 115.5 220 33.6
BolSC45t60936H Brassica oleracea HOM05D000216 ORTHO05D003518 1.3e-23 115.5 220 33.6
BraSC58t46404Z Brassica rapa HOM05D000216 ORTHO05D003518 1.3e-23 115.5 220 33.6
BraSC59t46514Z Brassica rapa HOM05D000216 ORTHO05D003518 1.3e-23 115.5 220 33.6
CARHR281910 Cardamine hirsuta HOM05D000216 ORTHO05D003518 1.3e-23 115.5 220 33.6
Hund29068 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-23 115.5 204 34.3
Sed0025851 Sechium edule HOM05D000216 ORTHO05D003518 1.7e-23 115.2 220 33.6
QL93p1261_0001 Quercus lobata HOM05D000216 ORTHO05D003518 2.2e-23 114.8 218 33.9
CiPaw.12G030900 Carya illinoinensis HOM05D000216 ORTHO05D003518 3.7e-23 114.0 222 33.3
LjContig00318g0019073 Lotus japonicus HOM05D000216 ORTHO05D003518 3.7e-23 114.0 224 33.0
RcHm_v2.0_CPg0502421 Rosa chinensis HOM05D000216 ORTHO05D003518 4.8e-23 113.6 224 33.0
unitig_91.g26495 Utricularia gibba HOM05D000216 ORTHO05D003518 6.3e-23 113.2 219 33.8
CsaV3_UNG207820 Cucumis sativus L. HOM05D000216 ORTHO05D003518 8.2e-23 112.8 256 30.9
Pp3c7_4970 Physcomitrium patens HOM05D000216 ORTHO05D003518 8.2e-23 112.8 224 30.8
PGR111G0003 Punica granatum HOM05D000216 ORTHO05D003518 8.2e-23 112.8 215 32.6
arahy.Tifrunner.gnm1.ann1.D2ZWCD Arachis hypogaea HOM05D000216 ORTHO05D003518 1.1e-22 112.5 228 32.9
Lalb_Chr01g0008431 Lupinus albus HOM05D000216 ORTHO05D003518 1.4e-22 112.1 230 32.6
Lalb_Chr09g0335351 Lupinus albus HOM05D000216 ORTHO05D003518 1.4e-22 112.1 230 32.6
arahy.Tifrunner.gnm1.ann1.S81HDC Arachis hypogaea HOM05D000216 ORTHO05D003518 1.8e-22 111.7 228 32.9
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 3.1e-22 110.9 215 32.6
Migut.D01338 Erythranthe guttata HOM05D000216 ORTHO05D003518 4.1e-22 110.5 225 33.3
Psat6g219440 Pisum sativum HOM05D000216 ORTHO05D003518 4.1e-22 110.5 227 31.7
Sed0001731 Sechium edule HOM05D000216 ORTHO05D003518 4.1e-22 110.5 220 32.3
Medtr0002s0530 Medicago truncatula HOM05D000216 ORTHO05D003638 5.3e-22 110.2 212 31.1
PSO548G0007 Papaver somniferum HOM05D000216 ORTHO05D003518 5.3e-22 110.2 224 31.7
HanXRQChr00c0601g0576521 Helianthus annuus HOM05D000216 ORTHO05D003518 9.1e-22 109.4 224 32.1
HanXRQChr08g0210191 Helianthus annuus HOM05D000216 ORTHO05D003518 9.1e-22 109.4 224 32.1
HanXRQChr11g0326621 Helianthus annuus HOM05D000216 ORTHO05D003518 9.1e-22 109.4 224 32.1
HanXRQCPg0579811 Helianthus annuus HOM05D000216 ORTHO05D003518 9.1e-22 109.4 224 32.1
MSTRG.22048 Avicennia marina HOM05D000216 ORTHO05D003518 1.2e-21 109.0 225 32.0
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.2e-21 109.0 206 33.0
EL10As12g24015 Beta vulgaris HOM05D000216 ORTHO05D003638 1.5e-21 108.6 212 33.5
Medtr4g051110 Medicago truncatula HOM05D000216 ORTHO05D003518 1.5e-21 108.6 224 33.0
Zm00001eb226420 Zea mays HOM05D000216 ORTHO05D003518 1.5e-21 108.6 219 32.0
CSS0038652 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D003518 2.0e-21 108.2 227 32.2
LjContig00489g0007578 Lotus japonicus HOM05D000216 ORTHO05D003518 2.0e-21 108.2 227 31.7
CAN.G612.2 Capsicum annuum HOM05D000216 ORTHO05D003518 1.0e-20 105.9 227 31.3
Ah.10g027610 Amaranthus hybridus HOM05D000216 ORTHO05D003518 1.3e-20 105.5 225 32.9
Ah.10g027790 Amaranthus hybridus HOM05D000216 ORTHO05D003518 1.3e-20 105.5 225 32.9
AUR62021207 Chenopodium quinoa HOM05D000216 ORTHO05D003518 1.3e-20 105.5 223 32.3
Potri.013G139670 Populus trichocarpa HOM05D000216 ORTHO05D003518 1.3e-20 105.5 218 32.6
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 1.3e-20 105.5 218 32.6
SEGI_26801 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.3e-20 105.5 199 35.2
Solyc00g500134.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.9e-20 104.4 215 30.7
Solyc00g500204.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.9e-20 104.4 215 30.7
Solyc00g500291.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.9e-20 104.4 215 30.7
Solyc00g500320.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.9e-20 104.4 215 30.7
Ah.10g028510 Amaranthus hybridus HOM05D000216 ORTHO05D003518 8.5e-20 102.8 212 32.5
arahy.Tifrunner.gnm1.ann1.RU7F0N Arachis hypogaea HOM05D000216 ORTHO05D003518 1.4e-19 102.1 219 30.6
AUR62030169 Chenopodium quinoa HOM05D000216 ORTHO05D003518 1.4e-19 102.1 223 30.9
Solyc00g500051.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.9e-19 101.7 203 32.0
AUR62030121 Chenopodium quinoa HOM05D000216 ORTHO05D003518 2.5e-19 101.3 230 30.4
HanXRQChr10g0282511 Helianthus annuus HOM05D000216 ORTHO05D003518 1.6e-18 98.6 204 31.9
Hund28178 Selenicereus undatus HOM05D000216 ORTHO05D003638 7.9e-18 96.3 211 30.3
MELO3C000623.2 Cucumis melo HOM05D000216 ORTHO05D003518 1.3e-15 89.0 220 29.5
Potri.019G028700 Populus trichocarpa HOM05D000216 ORTHO05D003518 2.8e-15 87.8 197 32.0
HanXRQChr13g0415481 Helianthus annuus HOM05D000216 ORTHO05D003518 3.7e-15 87.4 225 29.3
MELO3C001352.2 Cucumis melo HOM05D000216 ORTHO05D003518 6.3e-15 86.7 209 29.2
Aa31csc39G170 Aethionema arabicum HOM05D000216 ORTHO05D003518 8.2e-15 86.3 220 29.1
Gohir.A05G307932 Gossypium hirsutum HOM05D000216 ORTHO05D003518 1.4e-14 85.5 176 33.0
Hund29488 Selenicereus undatus HOM05D000216 ORTHO05D003518 1.4e-14 85.5 192 32.3
Sed0001459 Sechium edule HOM05D000216 ORTHO05D003518 2.4e-14 84.7 206 30.6
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 5.3e-14 83.6 221 29.0
HanXRQChr00c0313g0573451 Helianthus annuus HOM05D000216 ORTHO05D003518 9.1e-14 82.8 224 28.1
arahy.Tifrunner.gnm1.ann1.3KQL5I Arachis hypogaea HOM05D000216 ORTHO05D003518 2.6e-13 81.3 194 30.4
Lj2P1239T112 Lonicera japonica HOM05D000216 ORTHO05D003518 4.5e-13 80.5 188 30.3
SEGI_07796 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 3.8e-12 77.4 158 33.5
SEGI_22490 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 3.8e-12 77.4 158 33.5
SEGI_35543 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 3.8e-12 77.4 158 33.5
SEGI_38828 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 3.8e-12 77.4 158 33.5
SEGI_03518 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 8.5e-12 76.3 153 34.0
SEGI_24812 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 8.5e-12 76.3 153 34.0
SEGI_31181 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 8.5e-12 76.3 153 34.0
Psat4g062520 Pisum sativum HOM05D000216 ORTHO05D003518 2.5e-11 74.7 181 30.4
Medtr7g116690 Medicago truncatula HOM05D000216 ORTHO05D003518 5.5e-11 73.6 211 28.0
Cpa.g.sc25.174 Carica papaya HOM05D001862 ORTHO05D002133 5.2e-09 67.0 194 28.9
Sabra03G0042000 Salix brachista HOM05D001862 ORTHO05D002133 6.7e-09 66.6 194 28.4
SEGI_00070 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 6.7e-09 66.6 142 33.1
COL.COLO4_02626 Corchorus olitorius HOM05D000216 ORTHO05D003518 2.2e-07 61.6 188 26.1
Eucgr.J01354 Eucalyptus grandis HOM05D000216 ORTHO05D003518 2.2e-07 61.6 204 26.0
Nn020s41500 Nelumbo nucifera HOM05D000216 ORTHO05D003518 4.8e-07 60.5 69 44.9
Nn025s41561 Nelumbo nucifera HOM05D000216 ORTHO05D003518 4.8e-07 60.5 69 44.9
Phvul.003G256732 Phaseolus vulgaris HOM05D000216 ORTHO05D003518 6.3e-07 60.1 70 44.3
Hund31037 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.3e-07 60.1 56 48.2
Hund31056 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.3e-07 60.1 56 48.2
HanXRQChr14g0428001 Helianthus annuus HOM05D000216 ORTHO05D003518 8.2e-07 59.7 69 44.9
HanXRQChr14g0428021 Helianthus annuus HOM05D000216 ORTHO05D003518 8.2e-07 59.7 69 44.9
Cpa.g.sc80.72 Carica papaya HOM05D001862 ORTHO05D002133 1.1e-06 59.3 279 25.8
Lsat_1_v5_gn_0_46600 Lactuca sativa HOM05D000216 ORTHO05D003518 1.1e-06 59.3 69 44.9
Lsat_1_v5_gn_0_22681 Lactuca sativa HOM05D000216 ORTHO05D003518 1.4e-06 58.9 69 43.5
BolSC29t60572H Brassica oleracea HOM05D000216 ORTHO05D003518 1.8e-06 58.5 69 43.5
BolSC46t60986H Brassica oleracea HOM05D000216 ORTHO05D003518 1.8e-06 58.5 69 43.5
BolSC49t61199H Brassica oleracea HOM05D000216 ORTHO05D003518 1.8e-06 58.5 69 43.5
BraSC140t45589Z Brassica rapa HOM05D000216 ORTHO05D003518 1.8e-06 58.5 69 43.5
BraSC25t45883Z Brassica rapa HOM05D000216 ORTHO05D003518 1.8e-06 58.5 69 43.5
Lsat_1_v5_gn_1_56581 Lactuca sativa HOM05D000216 ORTHO05D003518 1.8e-06 58.5 70 44.3
Ah.05g176560 Amaranthus hybridus HOM05D000216 ORTHO05D003518 2.4e-06 58.2 56 48.2
Psat0s2961g0040 Pisum sativum HOM05D000216 ORTHO05D003518 2.4e-06 58.2 69 43.5
Psat2g079840 Pisum sativum HOM05D000216 ORTHO05D003518 2.4e-06 58.2 69 43.5
Mapoly0121s0021 Marchantia polymorpha HOM05D000216 ORTHO05D003518 3.1e-06 57.8 56 44.6
Atru.chr1.950 Acer truncatum HOM05D000216 ORTHO05D003518 4.1e-06 57.4 56 46.4
Psat6g018440 Pisum sativum HOM05D000216 ORTHO05D003518 7.0e-06 56.6 88 37.5
Ciclev10026113m.g Citrus clementina HOM05D001862 ORTHO05D002133 9.1e-06 56.2 299 25.1
Psat7g033640 Pisum sativum HOM05D000216 ORTHO05D003518 9.1e-06 56.2 69 42.0


User provided reference genes

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