Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024106 Carpinus fangiana HOM05D006551 ORTHO05D008546 1.7e-232 808.9 397 100.0
Pp3c2_11520 Physcomitrium patens HOM05D006551 ORTHO05D008546 3.5e-52 209.9 314 42.0
TPR.G17557 Trifolium pratense HOM05D006551 ORTHO05D008546 5.7e-18 96.3 119 43.7
Psat1g172360 Pisum sativum HOM05D006551 ORTHO05D008546 2.2e-17 94.4 118 42.4
Phvul.006G137611 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 8.2e-17 92.4 118 42.4
arahy.Tifrunner.gnm1.ann1.TFI8LM Arachis hypogaea HOM05D006551 ORTHO05D008546 3.1e-16 90.5 118 40.7
BraA09t41161Z Brassica rapa HOM05D006551 ORTHO05D008546 3.1e-16 90.5 132 42.4
Hund08692 Selenicereus undatus HOM05D006551 ORTHO05D008546 3.1e-16 90.5 133 39.1
arahy.Tifrunner.gnm1.ann1.HFV92P Arachis hypogaea HOM05D006551 ORTHO05D008546 4.1e-16 90.1 117 41.0
Lalb_Chr20g0119561 Lupinus albus HOM05D006551 ORTHO05D008546 4.1e-16 90.1 117 41.0
Phvul.006G137400 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 5.3e-16 89.7 118 40.7
Medtr2g027110 Medicago truncatula HOM05D006551 ORTHO05D008546 9.1e-16 89.0 126 39.7
HanXRQChr05g0129031 Helianthus annuus HOM05D006551 ORTHO05D008546 1.2e-15 88.6 115 40.9
Lj6g0027493 Lotus japonicus HOM05D006551 ORTHO05D008546 1.5e-15 88.2 118 39.8
Lsat_1_v5_gn_7_12961 Lactuca sativa HOM05D006551 ORTHO05D008546 2.0e-15 87.8 121 40.5
SpUn1059_0010 Schrenkiella parvula HOM05D006551 ORTHO05D008546 2.0e-15 87.8 119 42.0
THA.LOC104815473 Tarenaya hassleriana HOM05D006551 ORTHO05D008546 2.6e-15 87.4 118 39.0
ATR0751G145 Amborella trichopoda HOM05D006551 ORTHO05D008546 4.5e-15 86.7 139 38.1
ECA248G0604 Erigeron canadensis HOM05D006551 ORTHO05D008546 4.5e-15 86.7 122 38.5
Eucgr.L00150 Eucalyptus grandis HOM05D006551 ORTHO05D008546 4.5e-15 86.7 119 40.3
CiPaw.10G082200 Carya illinoinensis HOM05D006551 ORTHO05D008546 5.9e-15 86.3 131 37.4
Ca_00765_v3 Cicer arietinum L. HOM05D006551 ORTHO05D008546 5.9e-15 86.3 117 40.2
Sabra06G0003800 Salix brachista HOM05D006551 ORTHO05D008546 5.9e-15 86.3 128 35.9
VMungo0540G0952 Vigna mungo HOM05D006551 ORTHO05D008546 5.9e-15 86.3 119 42.0
AT2G22260 Arabidopsis thaliana HOM05D006551 ORTHO05D008546 7.7e-15 85.9 119 39.5
PGR042G3561 Punica granatum HOM05D006551 ORTHO05D008546 7.7e-15 85.9 117 39.3
Carub.0004s0140 Capsella rubella HOM05D006551 ORTHO05D008546 1.0e-14 85.5 119 38.7
vmacro03605 Vaccinium macrocarpon HOM05D006551 ORTHO05D008546 1.0e-14 85.5 125 36.8
Aa31LG2G12400 Aethionema arabicum HOM05D006551 ORTHO05D008546 1.7e-14 84.7 118 40.7
Ah.14g087400 Amaranthus hybridus HOM05D006551 ORTHO05D008546 1.7e-14 84.7 149 35.6
BcaC07g41084 Brassica carinata HOM05D006551 ORTHO05D008546 1.7e-14 84.7 121 41.3
BcaC07g41085 Brassica carinata HOM05D006551 ORTHO05D008546 1.7e-14 84.7 121 41.3
C08p40880 Brassica napus HOM05D006551 ORTHO05D008546 1.7e-14 84.7 121 41.3
BolC8t51654H Brassica oleracea HOM05D006551 ORTHO05D008546 1.7e-14 84.7 121 41.3
Glyma.09G014800 Glycine max HOM05D006551 ORTHO05D008546 1.7e-14 84.7 119 41.2
Prupe.4G003400 Prunus persica HOM05D006551 ORTHO05D008546 1.7e-14 84.7 136 36.8
RcHm_v2.0_Chr5g0000451 Rosa chinensis HOM05D006551 ORTHO05D008546 1.7e-14 84.7 144 34.0
Ciclev10016440m.g Citrus clementina HOM05D006551 ORTHO05D008546 2.2e-14 84.3 121 38.0
FvH4_3g00300 Fragaria vesca HOM05D006551 ORTHO05D008546 2.2e-14 84.3 136 36.0
Lj1C1247T0 Lonicera japonica HOM05D006551 ORTHO05D008546 2.2e-14 84.3 121 40.5
Cfa000032 Carpinus fangiana HOM05D006551 ORTHO05D008546 2.9e-14 84.0 123 36.6
AL4G11740 Arabidopsis lyrata HOM05D006551 ORTHO05D008546 3.8e-14 83.6 119 37.0
MSTRG.7126 Avicennia marina HOM05D006551 ORTHO05D008546 3.8e-14 83.6 129 37.2
Migut.M01446 Erythranthe guttata HOM05D006551 ORTHO05D008546 3.8e-14 83.6 131 38.9
Eucgr.E03850 Eucalyptus grandis HOM05D006551 ORTHO05D008546 3.8e-14 83.6 116 41.4
MD10G1339500 Malus domestica HOM05D006551 ORTHO05D008546 3.8e-14 83.6 139 35.3
A09p57680 Brassica napus HOM05D006551 ORTHO05D008546 5.0e-14 83.2 121 40.5
Haze_07021 Corylus avellana HOM05D006551 ORTHO05D008546 5.0e-14 83.2 120 37.5
Manes.09G083300 Manihot esculenta HOM05D006551 ORTHO05D008546 5.0e-14 83.2 121 39.7
Potri.006G004500 Populus trichocarpa HOM05D006551 ORTHO05D008546 5.0e-14 83.2 144 36.1
CAN.G1263.6 Capsicum annuum HOM05D006551 ORTHO05D008546 6.5e-14 82.8 119 42.9
Duzib160G0007 Durio zibethinus HOM05D006551 ORTHO05D008546 6.5e-14 82.8 140 35.0
Dinv15335 Davidia involucrata HOM05D006551 ORTHO05D008546 8.5e-14 82.4 122 36.1
AUR62012856 Chenopodium quinoa HOM05D006551 ORTHO05D008546 1.1e-13 82.0 132 39.4
AUR62021809 Chenopodium quinoa HOM05D006551 ORTHO05D008546 1.1e-13 82.0 140 37.9
COL.COLO4_31943 Corchorus olitorius HOM05D000879 ORTHO05D002864 1.5e-13 81.6 128 35.9
QL05p067740 Quercus lobata HOM05D006551 ORTHO05D008546 1.5e-13 81.6 122 37.7
PSO210G0886 Papaver somniferum HOM05D006551 ORTHO05D008546 1.9e-13 81.3 141 35.5
PSO210G1263 Papaver somniferum HOM05D006551 ORTHO05D008546 1.9e-13 81.3 147 35.4
CSS0008489 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 3.2e-13 80.5 119 38.7
CSS0047745 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 3.2e-13 80.5 119 38.7
Peaxi162Scf00811g00222 Petunia axillaris HOM05D006551 ORTHO05D008546 3.2e-13 80.5 101 40.6
Sopen04g007100 Solanum pennellii HOM05D006551 ORTHO05D008546 4.2e-13 80.1 119 41.2
PGSC0003DMG400015008 Solanum tuberosum HOM05D006551 ORTHO05D008546 4.2e-13 80.1 119 41.2
TWI38G1730 Tripterygium wilfordii HOM05D006551 ORTHO05D008546 4.2e-13 80.1 121 38.0
MELO3C008006.2 Cucumis melo HOM05D006551 ORTHO05D008546 5.5e-13 79.7 129 38.0
Gohir.A10G007900 Gossypium hirsutum HOM05D006551 ORTHO05D008546 5.5e-13 79.7 119 37.8
Sc17g0008010 Simmondsia chinensis HOM05D006551 ORTHO05D008546 5.5e-13 79.7 118 39.8
HPP92_018202 Vanilla planifolia HOM05D006551 ORTHO05D008546 5.5e-13 79.7 129 36.4
Aqoxy1G04265 Aquilegia oxysepala HOM05D006551 ORTHO05D008546 7.2e-13 79.3 140 34.3
Atru.chr1.1073 Acer truncatum HOM05D006551 ORTHO05D008546 9.4e-13 79.0 131 34.4
Thecc.06G241400 Theobroma cacao HOM05D006551 ORTHO05D008546 9.4e-13 79.0 120 37.5
Gorai.011G008500 Gossypium raimondii HOM05D006551 ORTHO05D008546 1.2e-12 78.6 119 37.8
unitig_37.g12177 Utricularia gibba HOM05D006551 ORTHO05D008546 1.2e-12 78.6 286 29.0
Cc09_g00290 Coffea canephora HOM05D006551 ORTHO05D008546 2.1e-12 77.8 113 37.2
SHI31451 Sapria himalayana HOM05D006551 ORTHO05D008546 2.7e-12 77.4 103 37.9
Zm00001eb380830 Zea mays HOM05D006551 ORTHO05D008546 2.7e-12 77.4 132 34.8
EL10Ac8g20269 Beta vulgaris HOM05D006551 ORTHO05D008546 3.6e-12 77.0 139 37.4
DCAR_002245 Daucus carota HOM05D006551 ORTHO05D008546 3.6e-12 77.0 121 38.0
Nitab4.5_0006294g0080 Nicotiana tabacum HOM05D006551 ORTHO05D008546 3.6e-12 77.0 103 41.7
SalBow8G1397 Salvia bowleyana HOM05D006551 ORTHO05D008546 4.7e-12 76.6 143 35.0
SalBow8G2449 Salvia bowleyana HOM05D006551 ORTHO05D008546 4.7e-12 76.6 143 35.0
CARHR113490 Cardamine hirsuta HOM05D006551 ORTHO05D008546 6.1e-12 76.3 113 37.2
Gohir.D10G007800 Gossypium hirsutum HOM05D006551 ORTHO05D008546 8.0e-12 75.9 119 37.0
TAR629G1611 Trochodendron aralioides HOM05D006551 ORTHO05D008546 2.3e-11 74.3 121 35.5
Nitab4.5_0000147g0330 Nicotiana tabacum HOM05D006551 ORTHO05D008546 3.0e-11 73.9 103 40.8
SGA_v2.0_scaffold7G03692 Striga asiatica HOM05D006551 ORTHO05D008546 3.0e-11 73.9 105 41.0
Hma1.2p1_1175F.1_g264070 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 4.0e-11 73.6 121 33.9
Sed0011139 Sechium edule HOM05D006551 ORTHO05D008546 5.2e-11 73.2 133 34.6
ClCG01G021210 Citrullus lanatus HOM05D006551 ORTHO05D008546 8.8e-11 72.4 133 33.8
CsaV3_6G048230 Cucumis sativus L. HOM05D006551 ORTHO05D008546 2.0e-10 71.2 133 34.6
SEGI_23146 Sequoiadendron giganteum HOM05D006551 ORTHO05D008546 1.7e-09 68.2 187 27.8
MCO03G167 Micromonas commoda HOM05D006551 ORTHO05D043702 4.8e-09 66.6 145 28.3
Glyma.15G120500 Glycine max HOM05D006551 ORTHO05D008546 4.1e-08 63.5 103 35.0
AagrBONN_evm.TU.Sc2ySwM_369.541 Anthoceros agrestis HOM05D006551 ORTHO05D008546 7.0e-08 62.8 152 27.0
CBR_g3891 Chara braunii HOM05D006551 ORTHO05D008546 7.0e-08 62.8 55 49.1
BcaB08g35054 Brassica carinata HOM05D006551 ORTHO05D008546 9.1e-08 62.4 264 27.7
Cpa.g.sc27.224 Carica papaya HOM05D006551 ORTHO05D008546 2.6e-07 60.8 113 31.9
Peaxi162Scf00827g00057 Petunia axillaris HOM05D006551 ORTHO05D008546 5.9e-07 59.7 90 34.4
AagrBONN_evm.TU.Sc2ySwM_362.1805 Anthoceros agrestis HOM05D006551 ORTHO05D008546 7.7e-07 59.3 75 41.3
Oeu025969.1 Olea europaea HOM05D006551 ORTHO05D008546 2.2e-06 57.8 86 39.5


User provided reference genes

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