Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 3.0e-144 515.4 306 100.0
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 1.4e-125 453.4 359 77.4
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 7.8e-108 394.4 303 76.6
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 1.9e-101 373.2 305 73.4
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 8.4e-94 347.8 240 81.7
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 1.2e-89 334.0 240 79.6
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 6.9e-88 328.2 243 81.5
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.9e-85 320.1 262 67.9
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 3.2e-85 319.3 265 69.8
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 2.1e-84 316.6 244 72.1
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 3.0e-83 312.8 272 66.5
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 3.3e-82 309.3 238 81.1
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 9.6e-82 307.8 263 71.1
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 2.4e-80 303.1 259 66.4
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 5.3e-80 302.0 276 67.8
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 6.9e-80 301.6 289 58.1
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 9.0e-80 301.2 173 96.0
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 3.8e-78 295.8 296 65.5
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 6.4e-78 295.0 219 73.1
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 7.1e-77 291.6 306 63.4
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.2e-76 290.8 297 63.6
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 2.1e-76 290.0 241 71.8
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 2.1e-76 290.0 301 62.8
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 2.1e-76 290.0 223 74.0
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 3.5e-76 289.3 248 75.0
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 7.9e-76 288.1 275 70.5
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 1.0e-75 287.7 232 69.4
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 1.3e-75 287.3 248 69.4
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 3.9e-75 285.8 289 54.3
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 5.1e-75 285.4 249 69.5
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 5.1e-75 285.4 263 64.3
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 6.7e-75 285.0 240 77.1
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.5e-74 283.9 258 66.3
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 5.6e-74 282.0 303 63.0
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 2.1e-73 280.0 245 69.4
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 3.7e-73 279.3 233 68.2
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.4e-72 277.3 250 64.8
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 2.4e-72 276.6 272 69.9
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 4.0e-72 275.8 242 64.0
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 5.3e-72 275.4 305 62.3
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 6.9e-72 275.0 248 64.5
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 9.0e-72 274.6 266 61.7
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 9.0e-72 274.6 266 61.7
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 9.0e-72 274.6 266 61.7
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 9.0e-72 274.6 300 57.3
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 1.5e-71 273.9 266 62.4
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 4.5e-71 272.3 266 62.0
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 7.6e-71 271.6 232 67.2
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 6.4e-70 268.5 295 61.0
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 1.4e-69 267.3 306 55.6
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 2.5e-69 266.5 241 65.6
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 3.2e-69 266.2 303 59.4
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 4.2e-69 265.8 239 72.8
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 7.1e-69 265.0 228 71.1
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 2.1e-68 263.5 248 58.1
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 6.0e-68 261.9 253 61.7
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 6.0e-68 261.9 248 65.7
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 7.9e-68 261.5 252 60.7
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 1.0e-67 261.2 253 61.7
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 3.0e-67 259.6 303 60.7
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 3.9e-67 259.2 295 59.0
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 6.7e-67 258.5 286 64.7
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 1.5e-66 257.3 240 67.9
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 1.5e-66 257.3 240 67.9
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 1.9e-66 256.9 238 68.5
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 2.5e-66 256.5 259 66.8
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 7.4e-66 255.0 286 60.5
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 7.4e-66 255.0 314 60.2
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 1.6e-65 253.8 169 78.1
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 1.6e-65 253.8 222 73.9
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 8.2e-65 251.5 192 63.5
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 1.4e-64 250.8 248 61.3
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.8e-64 250.4 282 56.7
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 5.3e-64 248.8 295 60.7
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 5.3e-64 248.8 236 66.5
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.5e-63 247.3 227 64.8
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 5.8e-63 245.4 248 60.1
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 7.6e-63 245.0 240 70.0
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 1.7e-62 243.8 259 59.8
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 6.5e-62 241.9 238 67.2
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 8.4e-62 241.5 237 68.4
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 1.6e-60 237.3 239 64.0
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 1.0e-59 234.6 310 56.8
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 1.0e-59 234.6 190 70.0
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 1.5e-58 230.7 241 56.4
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 1.3e-57 227.6 161 77.6
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 2.2e-57 226.9 304 51.0
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 8.2e-57 224.9 263 66.9
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 6.9e-56 221.9 290 57.6
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 7.7e-55 218.4 231 66.2
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 2.2e-54 216.9 225 68.9
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 2.2e-54 216.9 225 68.9
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 5.0e-54 215.7 228 62.3
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 6.5e-54 215.3 308 42.5
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 3.9e-51 206.1 255 53.3
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 5.1e-51 205.7 167 67.1
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 1.5e-50 204.1 230 61.7
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 4.8e-49 199.1 198 69.7
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 6.3e-49 198.7 308 44.5
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 1.1e-48 198.0 218 58.3
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 6.9e-48 195.3 167 59.9
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 3.8e-46 189.5 198 56.6
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 2.7e-44 183.3 225 58.2
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.5e-39 167.5 116 67.2
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 2.2e-38 163.7 289 50.2
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 6.5e-38 162.2 232 53.9
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 4.2e-37 159.5 129 73.6
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 2.1e-36 157.1 144 54.2
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 1.4e-32 144.4 111 73.0
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 2.6e-31 140.2 233 42.9
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 7.2e-29 132.1 276 39.9
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 8.0e-28 128.6 175 44.0
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 6.3e-25 119.0 103 79.6
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.4e-19 101.3 215 39.5
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 6.8e-19 99.0 116 59.5
QL08p032503 Quercus lobata HOM05D006314 ORTHO05D030082 7.7e-15 85.5 105 54.3
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 6.6e-14 82.4 43 83.7
QL08p032427 Quercus lobata HOM05D006314 ORTHO05D030082 1.9e-13 80.9 96 55.2
QL05p075461 Quercus lobata HOM05D006314 ORTHO05D030082 2.0e-10 70.9 42 76.2
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 2.6e-10 70.5 100 38.0
MD10G1314000 Malus domestica HOM05D006314 ORTHO05D007970 3.5e-07 60.1 39 69.2
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 7.8e-07 58.9 155 29.0
FvH4_3g02750 Fragaria vesca HOM05D006314 ORTHO05D007970 3.9e-06 56.6 43 67.4


User provided reference genes

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