Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009583 Carpinus fangiana HOM05D000867 ORTHO05D000864 2.5e-72 275.8 186 100.0
MD03G1003000 Malus domestica HOM05D000867 ORTHO05D000864 6.6e-09 65.1 66 50.0
DCAR_024462 Daucus carota HOM05D000867 ORTHO05D000864 8.6e-09 64.7 74 47.3
PSO339G4665 Papaver somniferum HOM05D000867 ORTHO05D000864 1.5e-08 63.9 66 48.5
PSO384G2965 Papaver somniferum HOM05D000867 ORTHO05D000864 1.5e-08 63.9 66 48.5
SEGI_24099 Sequoiadendron giganteum HOM05D000867 ORTHO05D000864 2.5e-08 63.2 66 50.0
SEGI_41456 Sequoiadendron giganteum HOM05D000867 ORTHO05D000864 2.5e-08 63.2 66 50.0
SEGI_08101 Sequoiadendron giganteum HOM05D000867 ORTHO05D000864 4.3e-08 62.4 65 49.2
Eucgr.B03594 Eucalyptus grandis HOM05D000867 ORTHO05D000864 5.6e-08 62.0 66 47.0
Potri.003G222300 Populus trichocarpa HOM05D000867 ORTHO05D000864 5.6e-08 62.0 66 51.5
ClCG03G014580 Citrullus lanatus HOM05D000867 ORTHO05D000864 9.5e-08 61.2 70 42.9
Lj1A522T65 Lonicera japonica HOM05D000867 ORTHO05D000864 9.5e-08 61.2 66 48.5
Lj1C521T5 Lonicera japonica HOM05D000867 ORTHO05D000864 9.5e-08 61.2 66 48.5
MELO3C015570.2 Cucumis melo HOM05D000867 ORTHO05D000864 1.2e-07 60.8 70 42.9
Dinv13480 Davidia involucrata HOM05D000867 ORTHO05D000864 1.2e-07 60.8 66 50.0
MBI11_g31290_MAGBIO Magnolia biondii HOM05D000867 ORTHO05D000864 1.2e-07 60.8 70 40.0
Aqoxy1G00491 Aquilegia oxysepala HOM05D000867 ORTHO05D000864 1.6e-07 60.5 66 45.5
MD11G1002800 Malus domestica HOM05D000867 ORTHO05D000864 1.6e-07 60.5 66 47.0
Nn2g15873 Nelumbo nucifera HOM05D000867 ORTHO05D000864 1.6e-07 60.5 66 47.0
Sed0024521 Sechium edule HOM05D000867 ORTHO05D000864 1.6e-07 60.5 70 40.0
Manes.03G086900 Manihot esculenta HOM05D000867 ORTHO05D000864 2.1e-07 60.1 66 48.5
Sabra03G0165300 Salix brachista HOM05D000867 ORTHO05D000864 2.1e-07 60.1 66 50.0
SEGI_36318 Sequoiadendron giganteum HOM05D000867 ORTHO05D000864 2.1e-07 60.1 66 47.0
CSS0034067 Camellia sinensis var. sinensis HOM05D000867 ORTHO05D000864 3.6e-07 59.3 74 45.9
CSS0038682 Camellia sinensis var. sinensis HOM05D000867 ORTHO05D000864 3.6e-07 59.3 74 45.9
Ciclev10017802m.g Citrus clementina HOM05D000867 ORTHO05D000864 3.6e-07 59.3 70 42.9
Glyma.15G053100 Glycine max HOM05D000867 ORTHO05D000864 3.6e-07 59.3 69 46.4
Sabra01G0001900 Salix brachista HOM05D000867 ORTHO05D000864 3.6e-07 59.3 66 48.5
Sed0015516 Sechium edule HOM05D000867 ORTHO05D000864 3.6e-07 59.3 70 42.9
VMungo0251G0704 Vigna mungo HOM05D000867 ORTHO05D000864 3.6e-07 59.3 66 45.5
Glyma.08G073100 Glycine max HOM05D000867 ORTHO05D000864 4.7e-07 58.9 66 45.5
Glyma.08G179300 Glycine max HOM05D000867 ORTHO05D000864 4.7e-07 58.9 74 43.2
Potri.001G002600 Populus trichocarpa HOM05D000867 ORTHO05D000864 4.7e-07 58.9 66 48.5
Prupe.6G002600 Prunus persica HOM05D000867 ORTHO05D000864 4.7e-07 58.9 66 47.0
CBR_g39057 Chara braunii HOM05D000867 ORTHO05D000864 6.2e-07 58.5 66 48.5
CsaV3_1G041600 Cucumis sativus L. HOM05D000867 ORTHO05D000864 6.2e-07 58.5 70 42.9
Duzib248G0024 Durio zibethinus HOM05D000867 ORTHO05D000864 6.2e-07 58.5 74 43.2
Nn7g35842 Nelumbo nucifera HOM05D000867 ORTHO05D000864 6.2e-07 58.5 66 43.9
QL12p036586 Quercus lobata HOM05D000867 ORTHO05D000864 6.2e-07 58.5 74 44.6
Phvul.006G206800 Phaseolus vulgaris HOM05D000867 ORTHO05D000864 8.0e-07 58.2 66 47.0
RcHm_v2.0_Chr5g0083871 Rosa chinensis HOM05D000867 ORTHO05D000864 8.0e-07 58.2 66 45.5
SHI28722 Sapria himalayana HOM05D000867 ORTHO05D000864 8.0e-07 58.2 80 38.8
AagrBONN_evm.TU.Sc2ySwM_344.4536 Anthoceros agrestis HOM05D000867 ORTHO05D000864 1.1e-06 57.8 66 43.9
arahy.Tifrunner.gnm1.ann1.774JYD Arachis hypogaea HOM05D000867 ORTHO05D000864 1.1e-06 57.8 74 41.9
arahy.Tifrunner.gnm1.ann1.MRV38C Arachis hypogaea HOM05D000867 ORTHO05D000864 1.1e-06 57.8 74 41.9
CANSAT11G0572 Cannabis sativa HOM05D000867 ORTHO05D000864 1.1e-06 57.8 61 47.5
Haze_10687 Corylus avellana HOM05D000867 ORTHO05D000864 1.1e-06 57.8 74 40.5
Oeu036420.1 Olea europaea HOM05D000867 ORTHO05D000864 1.1e-06 57.8 66 45.5
Phvul.002G208100 Phaseolus vulgaris HOM05D000867 ORTHO05D000864 1.1e-06 57.8 66 43.9
Rhsim13G0233400 Rhododendron simsii HOM05D000867 ORTHO05D000864 1.1e-06 57.8 70 45.7
Sc23g0000190 Simmondsia chinensis HOM05D000867 ORTHO05D000864 1.1e-06 57.8 66 40.9
vmacro04263 Vaccinium macrocarpon HOM05D000867 ORTHO05D000864 1.1e-06 57.8 66 48.5
vmacro23201 Vaccinium macrocarpon HOM05D000867 ORTHO05D000864 1.1e-06 57.8 66 48.5
GSVIVG01025489001 Vitis vinifera HOM05D000867 ORTHO05D000864 1.1e-06 57.8 65 47.7
DCAR_008726 Daucus carota HOM05D000867 ORTHO05D000864 1.4e-06 57.4 74 37.8
Dinv06028 Davidia involucrata HOM05D000867 ORTHO05D000864 1.4e-06 57.4 66 47.0
QL01p010635 Quercus lobata HOM05D000867 ORTHO05D000864 1.4e-06 57.4 65 47.7
CARHR120210 Cardamine hirsuta HOM05D000867 ORTHO05D000864 1.8e-06 57.0 68 44.1
Peaxi162Scf00036g00222 Petunia axillaris HOM05D000867 ORTHO05D000864 1.8e-06 57.0 66 43.9
TAR628G1001 Trochodendron aralioides HOM05D000867 ORTHO05D000864 1.8e-06 57.0 66 43.9
CDE06G0208 Ceratophyllum demersum HOM05D000867 ORTHO05D000864 2.3e-06 56.6 74 37.8
FAN16G2022 Fragaria x ananassa HOM05D005410 ORTHO05D007394 2.3e-06 56.6 66 45.5
Oeu007959.1 Olea europaea HOM05D000867 ORTHO05D000864 2.3e-06 56.6 74 41.9
AT1G22240 Arabidopsis thaliana HOM05D000867 ORTHO05D000864 3.1e-06 56.2 65 47.7
CiPaw.05G036200 Carya illinoinensis HOM05D000867 ORTHO05D000864 3.1e-06 56.2 74 39.2
CiPaw.13G177800 Carya illinoinensis HOM05D000867 ORTHO05D000864 3.1e-06 56.2 70 44.3
FvH4_3g45790 Fragaria vesca HOM05D000867 ORTHO05D000864 3.1e-06 56.2 66 43.9
FAN11G0543 Fragaria x ananassa HOM05D005410 ORTHO05D007394 3.1e-06 56.2 66 43.9
FAN25G1403 Fragaria x ananassa HOM05D005410 ORTHO05D007394 3.1e-06 56.2 66 43.9
MBI05_g15586_MAGBIO Magnolia biondii HOM05D000867 ORTHO05D000864 3.1e-06 56.2 66 43.9
Sc01g0000370 Simmondsia chinensis HOM05D000867 ORTHO05D000864 3.1e-06 56.2 66 40.9
TAR376G0184 Trochodendron aralioides HOM05D000867 ORTHO05D000864 3.1e-06 56.2 66 42.4
TAR633G0739 Trochodendron aralioides HOM05D000867 ORTHO05D000864 3.1e-06 56.2 66 43.9
Atru.chr3.2101 Acer truncatum HOM05D000867 ORTHO05D000864 4.0e-06 55.8 70 41.4
AL1G35692 Arabidopsis lyrata HOM05D000867 ORTHO05D000864 4.0e-06 55.8 74 43.2
EL10Ac1g01230 Beta vulgaris HOM05D000867 ORTHO05D000864 4.0e-06 55.8 65 43.1
Lalb_Chr15g0090461 Lupinus albus HOM05D000867 ORTHO05D000864 4.0e-06 55.8 66 43.9
TAR369G1023 Trochodendron aralioides HOM05D000867 ORTHO05D000864 4.0e-06 55.8 66 45.5
GSVIVG01033396001 Vitis vinifera HOM05D000867 ORTHO05D000864 4.0e-06 55.8 74 36.5
Atru.chr3.2394 Acer truncatum HOM05D000867 ORTHO05D000864 5.2e-06 55.5 70 40.0
ATR0697G298 Amborella trichopoda HOM05D000867 ORTHO05D000864 5.2e-06 55.5 70 41.4
Cc02_g21610 Coffea canephora HOM05D000867 ORTHO05D000864 5.2e-06 55.5 61 45.9
Dinv24196 Davidia involucrata HOM05D000867 ORTHO05D000864 5.2e-06 55.5 61 47.5
Dinv44766 Davidia involucrata HOM05D000867 ORTHO05D000864 5.2e-06 55.5 69 43.5
Manes.02G153200 Manihot esculenta HOM05D000867 ORTHO05D000864 5.2e-06 55.5 74 39.2
Hund26959 Selenicereus undatus HOM05D000867 ORTHO05D000864 6.8e-06 55.1 82 39.0
MSTRG.16579 Avicennia marina HOM05D000867 ORTHO05D000864 8.9e-06 54.7 58 48.3
Mapoly0036s0144 Marchantia polymorpha HOM05D000867 ORTHO05D000864 8.9e-06 54.7 66 42.4
Nn1g05337 Nelumbo nucifera HOM05D000867 ORTHO05D000864 8.9e-06 54.7 74 40.5
Oeu000242.1 Olea europaea HOM05D000867 ORTHO05D000864 8.9e-06 54.7 61 47.5
THA.LOC104800154 Tarenaya hassleriana HOM05D000867 ORTHO05D000864 8.9e-06 54.7 66 43.9
THA.LOC104811720 Tarenaya hassleriana HOM05D000867 ORTHO05D000864 8.9e-06 54.7 62 43.5
THA.LOC104825188 Tarenaya hassleriana HOM05D000867 ORTHO05D000864 8.9e-06 54.7 66 40.9


User provided reference genes

Program Settings