Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009139 Carpinus fangiana HOM05D004873 ORTHO05D006122 0.0e+00 1436.0 972 100.0
Haze_12170 Corylus avellana HOM05D004873 ORTHO05D006122 0.0e+00 1256.1 992 87.4
CiPaw.05G150500 Carya illinoinensis HOM05D004873 ORTHO05D006122 6.0e-263 911.4 1002 70.8
QL03p061438 Quercus lobata HOM05D004873 ORTHO05D006122 1.5e-226 790.4 791 71.7
Ciclev10030647m.g Citrus clementina HOM05D004873 ORTHO05D006122 1.2e-213 747.7 927 62.9
Atru.chr11.2013 Acer truncatum HOM05D004873 ORTHO05D006122 2.8e-212 743.0 994 59.2
TWI18G0605 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 1.4e-206 724.2 934 62.0
ClCG05G025280 Citrullus lanatus HOM05D004873 ORTHO05D006122 1.4e-203 714.1 1081 57.1
Duzib248G0479 Durio zibethinus HOM05D004873 ORTHO05D006122 4.5e-202 709.1 941 61.2
RcHm_v2.0_Chr4g0443951 Rosa chinensis HOM05D004873 ORTHO05D006122 5.9e-202 708.8 911 59.3
Nn4g22808 Nelumbo nucifera HOM05D004873 ORTHO05D006122 1.1e-200 704.5 973 59.0
Potri.008G147100 Populus trichocarpa HOM05D004873 ORTHO05D006122 1.1e-200 704.5 817 63.8
Duzib251G0436 Durio zibethinus HOM05D004873 ORTHO05D006122 3.3e-200 703.0 908 57.4
CSS0025142 Camellia sinensis var. sinensis HOM05D004873 ORTHO05D006122 1.6e-199 700.7 932 62.8
GSVIVG01020233001 Vitis vinifera HOM05D004873 ORTHO05D006122 2.8e-199 699.9 866 61.9
TAR622G0484 Trochodendron aralioides HOM05D004873 ORTHO05D006122 1.2e-197 694.5 993 59.5
TWI75G0297 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 2.6e-197 693.3 931 61.0
Manes.13G031000 Manihot esculenta HOM05D004873 ORTHO05D006122 3.4e-197 693.0 776 67.9
TWI36G0907 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 2.9e-196 689.9 910 62.0
MELO3C012001.2 Cucumis melo HOM05D004873 ORTHO05D006122 1.8e-195 687.2 1037 57.6
Hma1.2p1_0160F.1_g070740 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 1.8e-195 687.2 943 57.4
Dinv24864 Davidia involucrata HOM05D004873 ORTHO05D006122 2.9e-193 679.9 801 63.7
Sabra10G0067000 Salix brachista HOM05D004873 ORTHO05D006122 2.8e-191 673.3 953 58.1
Sed0006362 Sechium edule HOM05D004873 ORTHO05D006122 6.8e-190 668.7 790 65.4
Prupe.1G254700 Prunus persica HOM05D004873 ORTHO05D006122 8.9e-190 668.3 749 71.0
arahy.Tifrunner.gnm1.ann1.SJZ9IC Arachis hypogaea HOM05D004873 ORTHO05D006122 5.4e-187 659.1 969 58.2
CANSAT01G1467 Cannabis sativa HOM05D004873 ORTHO05D006122 1.2e-186 657.9 961 56.6
arahy.Tifrunner.gnm1.ann1.QGK7DH Arachis hypogaea HOM05D004873 ORTHO05D006122 3.5e-186 656.4 992 57.4
COL.COLO4_36971 Corchorus olitorius HOM05D004873 ORTHO05D006122 1.7e-185 654.1 893 52.0
Potri.010G094700 Populus trichocarpa HOM05D004873 ORTHO05D006122 1.7e-185 654.1 903 61.7
MBI15_g36943_MAGBIO Magnolia biondii HOM05D004873 ORTHO05D006122 3.0e-185 653.3 938 59.2
TAR374G0217 Trochodendron aralioides HOM05D004873 ORTHO05D006122 1.6e-183 647.5 969 57.7
Dinv15307 Davidia involucrata HOM05D004873 ORTHO05D006122 2.8e-183 646.7 750 70.0
Eucgr.B03347 Eucalyptus grandis HOM05D004873 ORTHO05D006122 1.8e-182 644.0 941 58.1
FvH4_4g34571 Fragaria vesca HOM05D004873 ORTHO05D006122 4.0e-182 642.9 946 56.1
FAN22G1569 Fragaria x ananassa HOM05D004873 ORTHO05D006122 5.8e-181 639.0 946 56.1
MD16G1091700 Malus domestica HOM05D004873 ORTHO05D006122 7.5e-181 638.6 733 68.3
TPR.G13590 Trifolium pratense HOM05D004873 ORTHO05D006122 1.9e-179 634.0 920 56.8
Lj6A805G39 Lonicera japonica HOM05D004873 ORTHO05D006122 7.1e-179 632.1 990 55.7
FAN12G3868 Fragaria x ananassa HOM05D004873 ORTHO05D006122 3.5e-178 629.8 949 56.0
Peaxi162Scf00338g00218 Petunia axillaris HOM05D004873 ORTHO05D006122 1.3e-177 627.9 934 54.7
CsaV3_5G031610 Cucumis sativus L. HOM05D004873 ORTHO05D006122 3.3e-176 623.2 779 65.3
Aqoxy3G02990_Aqoxy3G02991 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 4.3e-176 622.9 935 56.7
Actinidia01706 Actinidia chinensis HOM05D004873 ORTHO05D006122 1.2e-175 621.3 958 56.1
Glyma.01G031400 Glycine max HOM05D004873 ORTHO05D006122 8.1e-175 618.6 948 55.7
Lalb_Chr16g0392411 Lupinus albus HOM05D004873 ORTHO05D006122 1.1e-174 618.2 748 64.0
MD13G1091200 Malus domestica HOM05D004873 ORTHO05D006122 1.8e-174 617.5 750 64.9
FAN07G2437 Fragaria x ananassa HOM05D004873 ORTHO05D006122 2.9e-172 610.1 783 61.7
Ca_04600_v3 Cicer arietinum L. HOM05D004873 ORTHO05D006122 1.0e-169 601.7 948 51.1
FAN17G2310 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.7e-169 600.9 931 55.5
Medtr5g034430 Medicago truncatula HOM05D004873 ORTHO05D006122 3.0e-169 600.1 943 52.1
vmacro01183 Vaccinium macrocarpon HOM05D004873 ORTHO05D006122 1.5e-168 597.8 904 58.1
CAN.G376.10 Capsicum annuum HOM05D004873 ORTHO05D006122 5.6e-168 595.9 880 56.1
Gorai.005G183000 Gossypium raimondii HOM05D004873 ORTHO05D006122 5.6e-168 595.9 809 57.8
Oeu055452.2 Olea europaea HOM05D004873 ORTHO05D006122 7.3e-168 595.5 984 48.9
Gohir.D02G163000 Gossypium hirsutum HOM05D004873 ORTHO05D006122 1.2e-167 594.7 809 57.6
Rhsim12G0047400 Rhododendron simsii HOM05D004873 ORTHO05D006122 1.6e-167 594.3 996 54.2
Hma1.2p1_0867F.1_g230230 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 5.8e-165 585.9 845 55.1
Sopen05g001620 Solanum pennellii HOM05D004873 ORTHO05D006122 2.9e-164 583.6 939 53.4
VMungo1215G2983 Vigna mungo HOM05D004873 ORTHO05D006122 6.4e-164 582.4 903 54.9
Psat2g106600 Pisum sativum HOM05D004873 ORTHO05D006122 1.1e-163 581.6 752 60.8
Lalb_Chr05g0228131 Lupinus albus HOM05D004873 ORTHO05D006122 9.3e-163 578.6 749 63.8
PGSC0003DMG400030977 Solanum tuberosum HOM05D004873 ORTHO05D006122 1.2e-162 578.2 942 52.9
PSO063G1237 Papaver somniferum HOM05D004873 ORTHO05D006122 1.0e-161 575.1 978 54.7
Nitab4.5_0000113g0270 Nicotiana tabacum HOM05D004873 ORTHO05D006122 7.3e-160 568.9 939 46.2
Sc11g0001220 Simmondsia chinensis HOM05D004873 ORTHO05D006122 7.3e-160 568.9 759 60.7
HPP92_019184 Vanilla planifolia HOM05D004873 ORTHO05D006122 3.4e-157 560.1 946 51.0
Gohir.A03G140300 Gossypium hirsutum HOM05D004873 ORTHO05D006122 5.8e-157 559.3 730 60.1
Cc11_g14610 Coffea canephora HOM05D004873 ORTHO05D006122 4.9e-156 556.2 973 51.5
Phvul.002G071900 Phaseolus vulgaris HOM05D004873 ORTHO05D006122 1.1e-155 555.1 790 58.4
Thecc.02G248000 Theobroma cacao HOM05D004873 ORTHO05D006122 1.1e-155 555.1 716 63.0
Glyma.02G034300 Glycine max HOM05D004873 ORTHO05D006122 1.4e-155 554.7 748 60.7
Cpa.g.sc69.19 Carica papaya HOM05D004873 ORTHO05D006122 3.5e-154 550.1 906 50.0
DCAR_026543 Daucus carota HOM05D004873 ORTHO05D006122 7.9e-154 548.9 943 49.9
ECA199G0004 Erigeron canadensis HOM05D004873 ORTHO05D006122 1.7e-153 547.7 952 53.7
AUR62005371 Chenopodium quinoa HOM05D004873 ORTHO05D006122 3.3e-152 543.5 880 49.8
Lj2g0008447 Lotus japonicus HOM05D004873 ORTHO05D006122 9.6e-152 542.0 790 57.2
SGA_v2.0_scaffold165G38251 Striga asiatica HOM05D004873 ORTHO05D006122 9.6e-152 542.0 946 48.4
DCAR_024143 Daucus carota HOM05D004873 ORTHO05D006122 1.6e-151 541.2 935 49.1
PSO832G2005 Papaver somniferum HOM05D004873 ORTHO05D006122 4.2e-147 526.6 986 49.2
PGR102G2017 Punica granatum HOM05D004873 ORTHO05D006122 7.1e-147 525.8 928 52.8
Lsat_1_v5_gn_4_6981 Lactuca sativa HOM05D004873 ORTHO05D006122 1.0e-145 521.9 960 50.6
AL2G16455 Arabidopsis lyrata HOM05D004873 ORTHO05D006122 6.2e-143 512.7 909 52.7
MSTRG.7893 Avicennia marina HOM05D004873 ORTHO05D006122 3.1e-142 510.4 758 53.6
ATR0691G293 Amborella trichopoda HOM05D004873 ORTHO05D006122 5.3e-142 509.6 962 49.8
Migut.L01408 Erythranthe guttata HOM05D004873 ORTHO05D006122 1.5e-141 508.1 940 49.7
THA.LOC104819547 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 4.5e-141 506.5 904 54.2
Carub.0002s0504 Capsella rubella HOM05D004873 ORTHO05D006122 1.0e-140 505.4 912 51.1
EL10Ac6g13668 Beta vulgaris HOM05D004873 ORTHO05D006122 2.2e-140 504.2 982 53.0
CARHR052750 Cardamine hirsuta HOM05D004873 ORTHO05D006122 1.1e-139 501.9 805 54.4
AUR62014033 Chenopodium quinoa HOM05D004873 ORTHO05D006122 1.6e-138 498.0 988 46.9
THA.LOC104819514 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 3.0e-137 493.8 955 52.0
Lalb_Chr05g0216921 Lupinus albus HOM05D004873 ORTHO05D006122 1.6e-135 488.0 708 50.0
C01p36930 Brassica napus HOM05D004873 ORTHO05D006122 1.4e-134 485.0 941 48.8
HPP92_019185 Vanilla planifolia HOM05D004873 ORTHO05D006122 4.1e-134 483.4 946 47.6
BcaC06g31808 Brassica carinata HOM05D004873 ORTHO05D006122 3.4e-133 480.3 910 50.3
AT1G60200 Arabidopsis thaliana HOM05D004873 ORTHO05D006122 4.2e-131 473.4 762 57.3
BcaC02g10690 Brassica carinata HOM05D004873 ORTHO05D006122 2.1e-130 471.1 971 45.5
BraA01t02979Z Brassica rapa HOM05D004873 ORTHO05D006122 4.6e-130 469.9 912 48.8
BolC1t03651H Brassica oleracea HOM05D004873 ORTHO05D006122 1.0e-129 468.8 948 49.5
HanXRQChr12g0383471 Helianthus annuus HOM05D004873 ORTHO05D006122 1.8e-129 468.0 902 51.3
Aa31LG2G10110 Aethionema arabicum HOM05D004873 ORTHO05D006122 2.3e-129 467.6 995 48.8
A01p29150 Brassica napus HOM05D004873 ORTHO05D006122 3.0e-129 467.2 912 48.7
Thhalv10023242m.g Eutrema salsugineum HOM05D004873 ORTHO05D006122 3.0e-129 467.2 930 51.1
BcaC09g49418 Brassica carinata HOM05D004873 ORTHO05D006122 9.7e-128 462.2 938 48.9
C04p26690 Brassica napus HOM05D004873 ORTHO05D006122 1.3e-127 461.8 961 45.6
BolC4t24137H Brassica oleracea HOM05D004873 ORTHO05D006122 1.3e-127 461.8 961 45.6
Sp2g04470 Schrenkiella parvula HOM05D004873 ORTHO05D006122 4.8e-127 459.9 941 50.3
TAR629G1177 Trochodendron aralioides HOM05D004873 ORTHO05D006122 1.1e-126 458.8 901 44.2
Hund05991 Selenicereus undatus HOM05D004873 ORTHO05D006122 4.1e-126 456.8 749 58.7
SEGI_30430 Sequoiadendron giganteum HOM05D004873 ORTHO05D006122 1.6e-122 444.9 787 52.7
BcaB04g20256 Brassica carinata HOM05D004873 ORTHO05D006122 1.1e-118 432.2 894 48.4
unitig_27.g25195 Utricularia gibba HOM05D004873 ORTHO05D006122 1.8e-118 431.4 978 44.1
Ah.03g132650 Amaranthus hybridus HOM05D004873 ORTHO05D006122 7.0e-110 402.9 919 47.6
Zm00001eb042420 Zea mays HOM05D004873 ORTHO05D006122 9.4e-107 392.5 790 48.1
Zm00001eb179020 Zea mays HOM05D004873 ORTHO05D006122 7.0e-94 349.7 725 48.7
Pp3c25_3310 Physcomitrium patens HOM05D004873 ORTHO05D006122 1.2e-93 349.0 935 43.2
Mapoly0148s0032 Marchantia polymorpha HOM05D004873 ORTHO05D006122 2.0e-93 348.2 850 45.3
Nitab4.5_0010954g0010 Nicotiana tabacum HOM05D004873 ORTHO05D006122 2.2e-92 344.7 279 66.7
Oeu056734.1 Olea europaea HOM05D004873 ORTHO05D006122 1.9e-91 341.7 706 46.5
Actinidia08168 Actinidia chinensis HOM05D004873 ORTHO05D006122 5.2e-89 333.6 669 52.3
Pp3c16_19090 Physcomitrium patens HOM05D004873 ORTHO05D006122 4.4e-88 330.5 833 44.5
Solyc05g005620.4 Solanum lycopersicum HOM05D004873 ORTHO05D006122 1.2e-85 322.4 326 59.5
C05p51270 Brassica napus HOM05D004873 ORTHO05D006122 1.3e-84 318.9 589 52.1
FvH4_4g34570 Fragaria vesca HOM05D004873 ORTHO05D006122 3.6e-66 257.7 274 57.7
CDE01G0488 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 9.2e-62 243.0 223 60.5
FAN12G0889 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.2e-61 242.7 263 57.0
SMO117G0118 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 1.1e-54 219.5 752 37.9
PSO675G2898 Papaver somniferum HOM05D004873 ORTHO05D006122 1.9e-54 218.8 418 38.8
CDE02G2726 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 8.9e-49 199.9 295 47.8
Os08g0416400 Oryza sativa ssp. japonica HOM05D004873 ORTHO05D006122 1.7e-47 195.7 506 40.3
CDE02G2297 Ceratophyllum demersum HOM05D001801 ORTHO05D001739 6.4e-47 193.7 161 67.7
CDE01G0278 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 7.1e-46 190.3 487 38.8
CBR_g45271 Chara braunii HOM05D000019 ORTHO05D000002 2.5e-43 181.8 267 45.3
SHI27198 Sapria himalayana HOM05D004873 ORTHO05D006122 2.6e-32 145.2 139 61.2
Aqoxy1G03520 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 7.4e-27 127.1 71 87.3
MCO16G428 Micromonas commoda HOM05D004873 ORTHO05D006122 2.6e-24 118.6 95 58.9
Medtr5g034435 Medicago truncatula HOM05D004873 ORTHO05D006122 2.2e-23 115.5 71 81.7
Cre08.g375084 Chlamydomonas reinhardtii HOM05D004873 ORTHO05D006122 4.9e-23 114.4 100 58.0
PRCOL_00005912 Prasinoderma coloniale HOM05D004873 ORTHO05D006122 7.6e-16 90.5 85 49.4
PSO017G6017 Papaver somniferum HOM05D004873 ORTHO05D006122 3.2e-14 85.1 146 37.7
SMO119G0006 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 4.6e-13 81.3 127 44.9
PSO339G1217 Papaver somniferum HOM05D004873 ORTHO05D006122 5.3e-09 67.8 188 31.9
Lsat_1_v5_gn_5_2020 Lactuca sativa HOM05D004873 ORTHO05D026408 7.7e-08 63.9 135 36.3
Actinidia27784 Actinidia chinensis HOM05D004873 ORTHO05D026408 3.8e-07 61.6 179 35.8
FAN22G0459 Fragaria x ananassa HOM05D004873 ORTHO05D006122 3.8e-07 61.6 49 69.4
Lsat_1_v5_gn_6_33360 Lactuca sativa HOM05D004873 ORTHO05D026408 6.5e-07 60.8 186 30.1
ECA247G0578 Erigeron canadensis HOM05D004873 ORTHO05D006122 1.9e-06 59.3 109 40.4
MD16G1091800 Malus domestica HOM05D057391 ORTHO05D036519 2.5e-06 58.9 140 40.0
PSO339G2267 Papaver somniferum HOM05D004266 ORTHO05D005151 2.5e-06 58.9 87 34.5
PSO339G5784 Papaver somniferum HOM05D004266 ORTHO05D005151 2.5e-06 58.9 87 34.5
SMO351G0499 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 9.4e-06 57.0 122 40.2


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