Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa001627 Carpinus fangiana HOM05D006443 ORTHO05D007797 3.4e-194 681.4 328 100.0
Pp3c15_20640 Physcomitrium patens HOM05D006443 ORTHO05D007797 2.2e-23 114.0 210 33.3
SMO196G0120 Selaginella moellendorffii HOM05D006443 ORTHO05D007797 1.4e-22 111.3 197 35.0
Lsat_1_v5_gn_4_56020 Lactuca sativa HOM05D006443 ORTHO05D007797 4.1e-22 109.8 177 36.7
Mapoly0036s0054 Marchantia polymorpha HOM05D006443 ORTHO05D007797 7.0e-22 109.0 176 38.6
Psat5g096400 Pisum sativum HOM05D006443 ORTHO05D007797 7.0e-22 109.0 219 34.7
HanXRQChr08g0207841 Helianthus annuus HOM05D006443 ORTHO05D007797 9.2e-22 108.6 177 36.2
AUR62005622 Chenopodium quinoa HOM05D006443 ORTHO05D007797 1.2e-21 108.2 218 34.4
Glyma.18G006200 Glycine max HOM05D006443 ORTHO05D007797 2.7e-21 107.1 204 34.8
arahy.Tifrunner.gnm1.ann1.DXN1WG Arachis hypogaea HOM05D006443 ORTHO05D007797 4.5e-21 106.3 207 34.8
arahy.Tifrunner.gnm1.ann1.P16M7J Arachis hypogaea HOM05D006443 ORTHO05D007797 4.5e-21 106.3 204 34.3
Medtr3g085290 Medicago truncatula HOM05D006443 ORTHO05D007797 4.5e-21 106.3 204 34.8
Glyma.11G250800 Glycine max HOM05D006443 ORTHO05D007797 7.8e-21 105.5 204 35.3
Prupe.1G225500 Prunus persica HOM05D006443 ORTHO05D007797 7.8e-21 105.5 177 36.2
Hund06091 Selenicereus undatus HOM05D006443 ORTHO05D007797 1.0e-20 105.1 180 38.3
Gorai.012G175900 Gossypium raimondii HOM05D006443 ORTHO05D007797 1.3e-20 104.8 177 35.6
Ciclev10031911m.g Citrus clementina HOM05D006443 ORTHO05D007797 1.7e-20 104.4 177 35.6
Eucgr.H04637 Eucalyptus grandis HOM05D006443 ORTHO05D007797 1.7e-20 104.4 179 35.8
COL.COLO4_20406 Corchorus olitorius HOM05D006443 ORTHO05D007797 2.3e-20 104.0 177 37.9
PSO017G6191 Papaver somniferum HOM05D006443 ORTHO05D007797 2.3e-20 104.0 177 35.6
Gohir.D04G182900 Gossypium hirsutum HOM05D006443 ORTHO05D007797 2.9e-20 103.6 176 35.8
Zm00001eb169540 Zea mays HOM05D006443 ORTHO05D007797 2.9e-20 103.6 177 36.2
AagrBONN_evm.TU.Sc2ySwM_228.5822 Anthoceros agrestis HOM05D006443 ORTHO05D007797 3.8e-20 103.2 179 36.3
Migut.K00736 Erythranthe guttata HOM05D006443 ORTHO05D007797 3.8e-20 103.2 177 34.5
TPR.G17786 Trifolium pratense HOM05D006443 ORTHO05D007797 3.8e-20 103.2 204 33.8
Ca_16457_v3 Cicer arietinum L. HOM05D006443 ORTHO05D007797 5.0e-20 102.8 228 33.3
Aa31LG1G3790 Aethionema arabicum HOM05D006443 ORTHO05D007797 6.6e-20 102.4 177 34.5
Gohir.A04G139700 Gossypium hirsutum HOM05D006443 ORTHO05D007797 6.6e-20 102.4 177 35.6
Nn4g22309 Nelumbo nucifera HOM05D006443 ORTHO05D007797 6.6e-20 102.4 179 35.8
Potri.003G171900 Populus trichocarpa HOM05D006443 ORTHO05D007797 6.6e-20 102.4 177 36.2
MSTRG.502 Avicennia marina HOM05D006443 ORTHO05D007797 8.6e-20 102.1 177 33.3
Phvul.001G262100 Phaseolus vulgaris HOM05D006443 ORTHO05D007797 8.6e-20 102.1 198 34.8
FAN07G1264 Fragaria x ananassa HOM05D006443 ORTHO05D007797 1.1e-19 101.7 221 32.1
Lj6g0022486 Lotus japonicus HOM05D006443 ORTHO05D007797 1.1e-19 101.7 204 34.3
Sc14g0009070 Simmondsia chinensis HOM05D006443 ORTHO05D007797 1.1e-19 101.7 177 35.0
VMungo1383G0397 Vigna mungo HOM05D006443 ORTHO05D007797 1.1e-19 101.7 198 35.4
Cc11_g16930 Coffea canephora HOM05D006443 ORTHO05D007797 1.5e-19 101.3 177 35.6
Peaxi162Scf00359g00713 Petunia axillaris HOM05D006443 ORTHO05D007797 1.5e-19 101.3 184 35.3
Duzib248G1079 Durio zibethinus HOM05D006443 ORTHO05D007797 1.9e-19 100.9 177 35.0
PSO478G2155 Papaver somniferum HOM05D006443 ORTHO05D007797 1.9e-19 100.9 177 35.0
MELO3C011863.2 Cucumis melo HOM05D006443 ORTHO05D007797 2.5e-19 100.5 177 33.3
FAN22G2300 Fragaria x ananassa HOM05D006443 ORTHO05D007797 2.5e-19 100.5 221 32.1
CANSAT01G1158 Cannabis sativa HOM05D006443 ORTHO05D007797 3.3e-19 100.1 177 35.0
Thhalv10008060m.g Eutrema salsugineum HOM05D006443 ORTHO05D007797 3.3e-19 100.1 177 34.5
FAN17G1989 Fragaria x ananassa HOM05D006443 ORTHO05D007797 3.3e-19 100.1 221 32.1
MBI11_g05329_MAGBIO Magnolia biondii HOM05D006443 ORTHO05D007797 3.3e-19 100.1 175 33.7
RcHm_v2.0_Chr4g0430211 Rosa chinensis HOM05D006443 ORTHO05D007797 3.3e-19 100.1 177 35.0
THA.LOC104807130 Tarenaya hassleriana HOM05D006443 ORTHO05D007797 3.3e-19 100.1 177 34.5
Cpa.g.sc43.60 Carica papaya HOM05D006443 ORTHO05D007797 4.3e-19 99.8 177 35.0
Nitab4.5_0008905g0010 Nicotiana tabacum HOM05D006443 ORTHO05D007797 4.3e-19 99.8 251 29.9
SEGI_28427 Sequoiadendron giganteum HOM05D006443 ORTHO05D007797 4.3e-19 99.8 176 34.7
ATR0561G191 Amborella trichopoda HOM05D006443 ORTHO05D007797 5.6e-19 99.4 176 33.0
CsaV3_5G030250 Cucumis sativus L. HOM05D006443 ORTHO05D007797 5.6e-19 99.4 177 33.3
Actinidia30647 Actinidia chinensis HOM05D006443 ORTHO05D007797 7.3e-19 99.0 183 35.0
Lalb_Chr11g0075761 Lupinus albus HOM05D006443 ORTHO05D007797 7.3e-19 99.0 177 35.6
PGR119G0512 Punica granatum HOM05D006443 ORTHO05D007797 7.3e-19 99.0 177 34.5
Sp1g10410 Schrenkiella parvula HOM05D006443 ORTHO05D007797 7.3e-19 99.0 177 34.5
Thecc.02G208000 Theobroma cacao HOM05D006443 ORTHO05D007797 7.3e-19 99.0 177 35.0
Aqoxy5G03367 Aquilegia oxysepala HOM05D006443 ORTHO05D007797 9.5e-19 98.6 177 34.5
FvH4_4g23730 Fragaria vesca HOM05D006443 ORTHO05D007797 9.5e-19 98.6 177 34.5
Sabra03G0125800 Salix brachista HOM05D006443 ORTHO05D007797 9.5e-19 98.6 177 35.0
TAR629G0791 Trochodendron aralioides HOM05D006443 ORTHO05D007797 9.5e-19 98.6 182 35.7
CBR_g32330 Chara braunii HOM05D006443 ORTHO05D007797 1.2e-18 98.2 186 34.4
Hma1.2p1_0065F.1_g035440 Hydrangea macrophylla HOM05D006443 ORTHO05D007797 1.2e-18 98.2 194 32.5
Solyc04g045590.3 Solanum lycopersicum HOM05D006443 ORTHO05D007797 1.6e-18 97.8 260 28.8
Sopen04g017520 Solanum pennellii HOM05D006443 ORTHO05D007797 1.6e-18 97.8 260 28.8
AL1G22970 Arabidopsis lyrata HOM05D006443 ORTHO05D007797 2.1e-18 97.4 177 33.3
BcaB08g37422 Brassica carinata HOM05D006443 ORTHO05D007797 2.1e-18 97.4 177 34.5
Carub.0001s1145 Capsella rubella HOM05D006443 ORTHO05D007797 2.1e-18 97.4 177 33.3
CAN.G237.4 Capsicum annuum HOM05D006443 ORTHO05D007797 2.1e-18 97.4 177 32.2
BraA09t41778Z Brassica rapa HOM05D006443 ORTHO05D007797 2.8e-18 97.1 177 33.9
Haze_12422 Corylus avellana HOM05D006443 ORTHO05D007797 2.8e-18 97.1 177 35.0
GSVIVG01010487001 Vitis vinifera HOM05D006443 ORTHO05D007797 2.8e-18 97.1 177 35.0
A09p64340 Brassica napus HOM05D004937 ORTHO05D007797 3.6e-18 96.7 177 33.3
C08p47970 Brassica napus HOM05D006443 ORTHO05D007797 3.6e-18 96.7 177 33.9
BolC8t52335H Brassica oleracea HOM05D006443 ORTHO05D007797 3.6e-18 96.7 177 33.9
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 3.6e-18 96.7 154 37.7
MD13G1119500 Malus domestica HOM05D006443 ORTHO05D007797 4.7e-18 96.3 177 35.0
AT1G11780 Arabidopsis thaliana HOM05D006443 ORTHO05D007797 6.1e-18 95.9 177 32.8
BcaC07g41759 Brassica carinata HOM05D006443 ORTHO05D007797 6.1e-18 95.9 177 33.9
Cfa009372 Carpinus fangiana HOM05D006443 ORTHO05D007797 6.1e-18 95.9 177 34.5
CiPaw.05G109500 Carya illinoinensis HOM05D006443 ORTHO05D007797 8.0e-18 95.5 177 33.9
Oeu058924.1 Olea europaea HOM05D006443 ORTHO05D007797 8.0e-18 95.5 175 34.3
CSS0008831 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 1.0e-17 95.1 177 35.6
CSS0026603 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 1.0e-17 95.1 177 35.6
CARHR012120 Cardamine hirsuta HOM05D006443 ORTHO05D007797 1.4e-17 94.7 177 33.9
QL03p052624 Quercus lobata HOM05D006443 ORTHO05D007797 1.4e-17 94.7 177 34.5
SGA_v2.0_scaffold9G04677 Striga asiatica HOM05D006443 ORTHO05D007797 1.4e-17 94.7 192 32.3
Atru.chr11.2327 Acer truncatum HOM05D006443 ORTHO05D007797 1.8e-17 94.4 177 33.9
TWI36G0197 Tripterygium wilfordii HOM05D006443 ORTHO05D007797 1.8e-17 94.4 177 33.9
CDE05G3615 Ceratophyllum demersum HOM05D006443 ORTHO05D007797 2.0e-16 90.9 177 32.8
unitig_747.g21126 Utricularia gibba HOM05D006443 ORTHO05D007797 7.5e-16 89.0 134 39.6
Manes.13G011800 Manihot esculenta HOM05D006443 ORTHO05D007797 1.7e-15 87.8 142 38.0
Nitab4.5_0001356g0010 Nicotiana tabacum HOM05D006443 ORTHO05D007797 1.7e-15 87.8 134 37.3
AUR62028926 Chenopodium quinoa HOM05D006443 ORTHO05D007797 4.9e-15 86.3 129 39.5
EL10Ac6g13506 Beta vulgaris HOM05D006443 ORTHO05D007797 1.4e-14 84.7 137 38.7
Os11g0488500 Oryza sativa ssp. japonica HOM05D006443 ORTHO05D007797 1.4e-14 84.7 130 40.0
Rhsim12G0099900 Rhododendron simsii HOM05D006443 ORTHO05D007797 4.1e-14 83.2 134 38.1
Sed0000233 Sechium edule HOM05D006443 ORTHO05D007797 2.7e-13 80.5 130 36.2
Actinidia08069 Actinidia chinensis HOM05D006443 ORTHO05D007797 4.6e-13 79.7 129 38.0
Hma1.2p1_0065F.1_g035450 Hydrangea macrophylla HOM05D006443 ORTHO05D007797 5.9e-13 79.3 129 34.9
PRCOL_00005324 Prasinoderma coloniale HOM05D006443 ORTHO05D007797 1.3e-12 78.2 217 29.0
Cre06.g278198 Chlamydomonas reinhardtii HOM05D006443 ORTHO05D007797 6.6e-12 75.9 234 27.4
ClCG11G013630 Citrullus lanatus HOM05D006443 ORTHO05D007797 6.6e-12 75.9 176 30.1
MCO14G547 Micromonas commoda HOM05D006443 ORTHO05D007797 1.6e-10 71.2 81 45.7
Lj6C827T5 Lonicera japonica HOM05D006443 ORTHO05D007797 2.1e-10 70.9 142 33.1
CSS0017614 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 2.8e-10 70.5 118 38.1
CSS0019305 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 8.0e-10 68.9 120 37.5
DCAR_031204 Daucus carota HOM05D006443 ORTHO05D007797 1.8e-09 67.8 108 37.0
SGA_v2.0_scaffold122G33317 Striga asiatica HOM05D003341 ORTHO05D003603 5.2e-09 66.2 164 30.5
vmacro22021 Vaccinium macrocarpon HOM05D003341 ORTHO05D003603 1.2e-08 65.1 163 31.9
HanXRQChr16g0530111 Helianthus annuus HOM05D003341 ORTHO05D003603 2.0e-08 64.3 185 30.8
Sabra04G0150300 Salix brachista HOM05D003341 ORTHO05D003603 4.4e-08 63.2 164 27.4
PGR004G1582 Punica granatum HOM05D003341 ORTHO05D003603 1.7e-07 61.2 165 28.5
FAN09G0950 Fragaria x ananassa HOM05D003341 ORTHO05D003603 2.9e-07 60.5 163 30.7
FAN14G1485 Fragaria x ananassa HOM05D003341 ORTHO05D003603 2.9e-07 60.5 163 30.7
FvH4_6g35240 Fragaria vesca HOM05D003341 ORTHO05D003603 3.7e-07 60.1 163 30.1
FAN02G2897 Fragaria x ananassa HOM05D003341 ORTHO05D003603 6.4e-07 59.3 163 30.1
Actinidia26012 Actinidia chinensis HOM05D003341 ORTHO05D003603 1.4e-06 58.2 163 27.6
SalBow6G5848 Salvia bowleyana HOM05D003341 ORTHO05D003603 1.4e-06 58.2 163 26.4


User provided reference genes

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