Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 3.4e-175 618.2 318 100.0
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 2.7e-143 512.3 346 80.9
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 1.1e-120 437.2 300 77.0
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 2.2e-105 386.3 311 66.2
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 2.4e-104 382.9 311 64.0
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 2.3e-102 376.3 311 64.0
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 1.4e-99 367.1 311 64.0
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 1.6e-95 353.6 309 62.1
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 5.1e-94 348.6 302 62.6
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 3.7e-92 342.4 314 60.5
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 6.2e-92 341.7 312 58.0
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 1.8e-91 340.1 311 60.1
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 4.0e-91 339.0 312 57.4
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 9.0e-91 337.8 312 56.4
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 2.6e-90 336.3 300 61.0
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.4e-90 335.9 319 58.9
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 4.5e-90 335.5 311 58.5
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.7e-89 333.6 320 58.8
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 4.2e-88 328.9 300 58.7
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 1.6e-87 327.0 301 59.1
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 2.1e-87 326.6 302 59.3
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 2.7e-87 326.2 298 61.7
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 1.3e-86 323.9 312 59.0
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.3e-86 323.9 312 59.0
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 2.1e-84 316.6 301 57.8
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.8e-84 316.2 321 57.3
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 6.2e-84 315.1 308 57.1
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.1e-83 314.3 316 57.0
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.8e-83 313.5 301 57.1
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 2.6e-82 309.7 312 53.2
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 1.0e-81 307.8 302 55.0
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 3.8e-81 305.8 302 55.3
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.9e-80 303.5 299 54.5
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 2.5e-80 303.1 302 55.0
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 6.0e-79 298.5 316 51.9
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 3.0e-78 296.2 301 51.5
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 5.1e-78 295.4 313 51.4
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 1.9e-77 293.5 325 49.8
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 1.6e-76 290.4 301 54.2
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 2.8e-76 289.7 314 51.9
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 1.4e-75 287.3 313 52.4
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 2.4e-75 286.6 304 52.6
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 9.0e-75 284.6 310 54.2
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.5e-74 283.9 275 54.9
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 2.0e-74 283.5 299 52.2
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 2.2e-73 280.0 251 58.6
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 2.9e-73 279.6 312 49.0
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 1.2e-71 274.2 301 51.5
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 6.1e-71 271.9 302 50.0
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 5.1e-70 268.9 304 50.0
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 2.0e-69 266.9 302 48.7
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 2.5e-69 266.5 318 48.1
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 2.5e-69 266.5 251 54.2
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 1.7e-68 263.8 321 48.6
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 3.7e-68 262.7 299 49.8
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 1.4e-67 260.8 315 48.6
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 3.1e-67 259.6 300 48.0
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.5e-66 257.3 303 46.2
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 5.9e-66 255.4 313 45.7
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 1.0e-65 254.6 305 49.8
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.7e-65 253.8 299 45.8
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 2.2e-65 253.4 329 47.7
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 8.5e-65 251.5 322 47.8
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 1.9e-64 250.4 312 46.5
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 3.2e-64 249.6 310 49.0
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 5.5e-64 248.8 301 45.5
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 9.4e-64 248.1 309 47.6
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 1.2e-63 247.7 309 47.9
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 3.6e-63 246.1 275 49.5
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 1.8e-62 243.8 303 46.5
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 3.9e-62 242.7 304 48.4
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 6.7e-62 241.9 301 46.5
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 7.4e-61 238.4 300 46.0
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 7.4e-61 238.4 310 46.5
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 4.8e-60 235.7 302 47.0
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 6.3e-60 235.3 311 44.4
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 8.2e-60 235.0 301 45.5
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 2.4e-59 233.4 304 44.7
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 9.1e-59 231.5 303 46.2
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 1.2e-58 231.1 301 45.2
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 2.6e-58 229.9 299 44.1
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 3.5e-58 229.6 301 45.2
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 4.5e-58 229.2 302 45.7
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 4.5e-58 229.2 303 45.5
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 4.5e-58 229.2 303 45.2
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.0e-57 228.0 309 44.0
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 2.2e-57 226.9 303 45.5
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 8.5e-57 224.9 309 43.7
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 5.2e-54 215.7 301 42.5
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 1.5e-53 214.2 334 40.7
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 6.3e-52 208.8 300 40.7
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 9.1e-51 204.9 300 39.7
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 1.5e-48 197.6 237 51.1
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 4.2e-48 196.1 300 43.3
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.4e-46 191.0 305 42.0
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 1.2e-34 151.4 164 48.2
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 7.7e-34 148.7 135 53.3
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 3.8e-33 146.4 311 35.0
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 1.5e-32 144.4 302 33.4
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 4.7e-31 139.4 135 51.1
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 2.2e-28 130.6 268 35.1
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 3.7e-28 129.8 138 55.1
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 5.0e-25 119.4 139 48.2
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 5.4e-19 99.4 91 60.4
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 7.3e-16 89.0 133 38.3
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.2e-15 88.2 143 32.9
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.2e-15 88.2 143 32.9
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 6.2e-15 85.9 227 29.1
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 1.6e-10 71.2 250 26.4
Actinidia07619 Actinidia chinensis HOM05D006143 ORTHO05D007587 6.0e-10 69.3 114 39.5
CSS0047646 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D001638 5.1e-09 66.2 63 63.5
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 1.1e-08 65.1 144 34.7
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 2.5e-08 63.9 79 40.5
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 7.3e-08 62.4 240 28.3
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 1.1e-06 58.5 92 32.6


User provided reference genes

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