Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g07950 Coffea canephora HOM05D004329 ORTHO05D005516 3.7e-244 847.8 441 100.0
Dinv23217 Davidia involucrata HOM05D004329 ORTHO05D005516 9.2e-203 710.3 440 82.3
Actinidia08906 Actinidia chinensis HOM05D000877 ORTHO05D001509 1.6e-202 709.5 442 81.9
vmacro19178 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 1.9e-200 702.6 442 81.7
Hma1.2p1_0493F.1_g164990 Hydrangea macrophylla HOM05D004329 ORTHO05D005516 3.3e-200 701.8 441 81.0
CSS0022050 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 9.6e-200 700.3 442 81.9
Rhsim08G0196600 Rhododendron simsii HOM05D004329 ORTHO05D005516 4.7e-199 698.0 442 81.9
Duzib205G0720 Durio zibethinus HOM05D004329 ORTHO05D005516 2.4e-198 695.7 442 79.2
Lj5A87T69 Lonicera japonica HOM05D004329 ORTHO05D005516 5.3e-198 694.5 430 82.1
Oeu012844.2 Olea europaea HOM05D004329 ORTHO05D005516 5.3e-198 694.5 442 80.8
CAN.G1210.1 Capsicum annuum HOM05D004329 ORTHO05D005516 9.0e-198 693.7 439 80.4
Actinidia18306 Actinidia chinensis HOM05D004329 ORTHO05D005516 3.4e-197 691.8 442 79.9
Nitab4.5_0007718g0050 Nicotiana tabacum HOM05D004329 ORTHO05D005516 9.9e-197 690.3 440 80.9
Sopen02g013850 Solanum pennellii HOM05D004329 ORTHO05D005516 2.2e-196 689.1 440 80.5
Actinidia36840 Actinidia chinensis HOM05D004329 ORTHO05D005516 2.9e-196 688.7 442 79.6
MSTRG.22850 Avicennia marina HOM05D004329 ORTHO05D005516 3.8e-196 688.3 442 80.1
Solyc02g062810.4 Solanum lycopersicum HOM05D004329 ORTHO05D005516 3.8e-196 688.3 440 80.5
Sopen03g024820 Solanum pennellii HOM05D004329 ORTHO05D005516 1.1e-195 686.8 440 80.2
Thecc.03G139600 Theobroma cacao HOM05D004329 ORTHO05D005516 1.1e-195 686.8 442 78.7
vmacro06162 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 7.1e-195 684.1 442 80.1
PGSC0003DMG400015501 Solanum tuberosum HOM05D004329 ORTHO05D005516 1.2e-194 683.3 440 79.5
Solyc03g093970.3 Solanum lycopersicum HOM05D004329 ORTHO05D005516 2.7e-194 682.2 440 79.8
CANSAT80G0883 Cannabis sativa HOM05D004329 ORTHO05D005516 4.6e-194 681.4 442 78.5
Ciclev10031005m.g Citrus clementina HOM05D004329 ORTHO05D005516 3.0e-193 678.7 442 78.1
QL10p000650 Quercus lobata HOM05D004329 ORTHO05D005516 3.0e-193 678.7 440 79.5
Cfa018712 Carpinus fangiana HOM05D004329 ORTHO05D005516 3.9e-193 678.3 442 79.4
DCAR_016350 Daucus carota HOM05D004329 ORTHO05D005516 2.5e-192 675.6 440 78.9
CANSAT80G0741 Cannabis sativa HOM05D004329 ORTHO05D005516 3.3e-192 675.2 443 78.1
Atru.chr6.1908 Acer truncatum HOM05D004329 ORTHO05D005516 1.3e-191 673.3 442 78.1
Peaxi162Scf00935g00018 Petunia axillaris HOM05D004329 ORTHO05D005516 6.2e-191 671.0 440 78.2
CiPaw.09G139600 Carya illinoinensis HOM05D004329 ORTHO05D005516 1.4e-190 669.8 442 78.1
Gohir.D07G051400 Gossypium hirsutum HOM05D004329 ORTHO05D005516 1.4e-190 669.8 440 76.6
Potri.012G106200 Populus trichocarpa HOM05D004329 ORTHO05D005516 1.4e-190 669.8 442 77.4
TAR374G0799 Trochodendron aralioides HOM05D004329 ORTHO05D005516 4.0e-190 668.3 442 76.9
Migut.I00617 Erythranthe guttata HOM05D004329 ORTHO05D005516 5.3e-190 667.9 442 78.1
Haze_07104 Corylus avellana HOM05D004329 ORTHO05D005516 9.0e-190 667.2 466 75.5
Potri.015G105600 Populus trichocarpa HOM05D004329 ORTHO05D005516 3.4e-189 665.2 442 76.2
Prupe.5G142700 Prunus persica HOM05D004329 ORTHO05D005516 7.6e-189 664.1 440 76.8
TWI39G0623 Tripterygium wilfordii HOM05D004329 ORTHO05D005516 7.6e-189 664.1 440 76.6
Gohir.A07G047200 Gossypium hirsutum HOM05D004329 ORTHO05D005516 2.2e-188 662.5 446 75.6
Gorai.001G054500 Gossypium raimondii HOM05D004329 ORTHO05D005516 2.9e-188 662.1 454 74.2
Sabra15G0125900 Salix brachista HOM05D004329 ORTHO05D005516 3.8e-188 661.8 442 76.2
SGA_v2.0_scaffold74G24730 Striga asiatica HOM05D004329 ORTHO05D005516 8.4e-188 660.6 442 77.6
THA.LOC104823903 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 7.1e-187 657.5 442 75.8
Lsat_1_v5_gn_4_84600 Lactuca sativa HOM05D004329 ORTHO05D005516 7.9e-186 654.1 444 76.8
MD14G1148000 Malus domestica HOM05D004329 ORTHO05D005516 5.1e-185 651.4 441 76.6
MBI13_g15007_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 6.7e-185 651.0 442 74.9
Thhalv10003854m.g Eutrema salsugineum HOM05D004329 ORTHO05D005516 1.1e-184 650.2 435 74.9
Eucgr.F03808 Eucalyptus grandis HOM05D004329 ORTHO05D005516 5.6e-184 647.9 442 74.9
PGR083G0006 Punica granatum HOM05D004329 ORTHO05D005516 5.6e-184 647.9 442 75.1
ECA232G2772 Erigeron canadensis HOM05D004329 ORTHO05D005516 7.4e-184 647.5 440 75.0
THA.LOC104819422 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 1.6e-183 646.4 442 74.0
MD06G1131700 Malus domestica HOM05D004329 ORTHO05D005516 4.8e-183 644.8 441 75.5
GSVIVG01008641001 Vitis vinifera HOM05D004329 ORTHO05D005516 8.1e-183 644.0 442 76.5
Aa31LG11G1550 Aethionema arabicum HOM05D004329 ORTHO05D005516 1.1e-182 643.7 440 73.2
BcaB02g09609 Brassica carinata HOM05D004329 ORTHO05D005516 1.8e-182 642.9 440 73.9
A06p28670 Brassica napus HOM05D004329 ORTHO05D005516 2.4e-182 642.5 440 73.4
BraA06t25807Z Brassica rapa HOM05D004329 ORTHO05D005516 2.4e-182 642.5 440 73.4
Dinv13728 Davidia involucrata HOM05D004329 ORTHO05D005516 2.4e-182 642.5 399 83.2
EL10Ac7g17942 Beta vulgaris HOM05D004329 ORTHO05D005516 3.1e-182 642.1 442 74.7
Medtr8g100110 Medicago truncatula HOM05D004329 ORTHO05D005516 3.1e-182 642.1 443 74.0
BraA02t09122Z Brassica rapa HOM05D004329 ORTHO05D005516 5.3e-182 641.3 441 73.2
Sc22g0003470 Simmondsia chinensis HOM05D004329 ORTHO05D005516 5.3e-182 641.3 440 73.4
TPR.G12807 Trifolium pratense HOM05D004329 ORTHO05D005516 6.9e-182 641.0 443 74.3
HanXRQChr09g0273891 Helianthus annuus HOM05D004329 ORTHO05D005516 9.0e-182 640.6 442 75.1
Nn4g22142 Nelumbo nucifera HOM05D004329 ORTHO05D005516 1.5e-181 639.8 438 74.4
Sp2g25150 Schrenkiella parvula HOM05D004329 ORTHO05D005516 2.6e-181 639.0 440 73.2
Phvul.002G282000 Phaseolus vulgaris HOM05D004329 ORTHO05D005516 9.9e-181 637.1 443 73.8
Hund02504 Selenicereus undatus HOM05D004329 ORTHO05D005516 9.9e-181 637.1 442 74.4
BcaC01g02451 Brassica carinata HOM05D004329 ORTHO05D005516 2.2e-180 636.0 440 72.7
C03p65130 Brassica napus HOM05D004329 ORTHO05D005516 2.2e-180 636.0 440 72.7
BolC2t12235H Brassica oleracea HOM05D004329 ORTHO05D005516 2.2e-180 636.0 436 73.6
BolC3t18767H Brassica oleracea HOM05D004329 ORTHO05D005516 2.2e-180 636.0 440 72.7
COL.COLO4_37247 Corchorus olitorius HOM05D004329 ORTHO05D005516 3.8e-180 635.2 461 72.2
CsaV3_1G043340 Cucumis sativus L. HOM05D004329 ORTHO05D005516 4.9e-180 634.8 440 74.3
Lalb_Chr07g0183781 Lupinus albus HOM05D004329 ORTHO05D005516 4.9e-180 634.8 443 74.0
VMungo0251G1423 Vigna mungo HOM05D004329 ORTHO05D005516 4.9e-180 634.8 443 73.8
Manes.06G126200 Manihot esculenta HOM05D004329 ORTHO05D005516 6.4e-180 634.4 442 73.1
Psat7g039240 Pisum sativum HOM05D004329 ORTHO05D005516 6.4e-180 634.4 443 73.8
RcHm_v2.0_Chr7g0188791 Rosa chinensis HOM05D004329 ORTHO05D005516 6.4e-180 634.4 442 74.7
Aqoxy4G00231 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 8.4e-180 634.0 442 73.5
ClCG03G012650 Citrullus lanatus HOM05D004329 ORTHO05D005516 1.9e-179 632.9 440 74.1
FAN18G1836 Fragaria x ananassa HOM05D004329 ORTHO05D005516 9.3e-179 630.6 442 74.9
Lj4g0026438 Lotus japonicus HOM05D004329 ORTHO05D005516 9.3e-179 630.6 443 72.9
FAN13G1968 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.6e-178 629.8 455 73.2
MELO3C015126.2 Cucumis melo HOM05D004329 ORTHO05D005516 2.7e-178 629.0 440 73.9
AUR62009528 Chenopodium quinoa HOM05D004329 ORTHO05D005516 3.5e-178 628.6 432 74.5
Glyma.05G200600 Glycine max HOM05D004329 ORTHO05D005516 4.6e-178 628.2 443 72.9
Sed0013101 Sechium edule HOM05D004329 ORTHO05D005516 4.6e-178 628.2 440 74.1
Ca_16811_v3 Cicer arietinum L. HOM05D004329 ORTHO05D005516 6.0e-178 627.9 443 73.4
AL8G38730 Arabidopsis lyrata HOM05D004329 ORTHO05D005516 1.3e-177 626.7 440 72.0
Carub.0005s0295 Capsella rubella HOM05D004329 ORTHO05D005516 1.3e-177 626.7 440 72.0
Carub.0008s2266 Capsella rubella HOM05D004329 ORTHO05D005516 1.3e-177 626.7 430 73.0
FvH4_5g09400 Fragaria vesca HOM05D004329 ORTHO05D005516 2.3e-177 625.9 440 74.5
Sabra12G0078600 Salix brachista HOM05D004329 ORTHO05D005516 1.1e-176 623.6 523 65.0
AT5G61970 Arabidopsis thaliana HOM05D004329 ORTHO05D005516 2.1e-175 619.4 440 71.6
Sed0023904 Sechium edule HOM05D004329 ORTHO05D005516 4.8e-175 618.2 441 73.7
ATR1096G004 Amborella trichopoda HOM05D004329 ORTHO05D005516 3.2e-171 605.5 442 69.0
BcaB07g29807 Brassica carinata HOM05D004329 ORTHO05D005516 3.2e-171 605.5 464 68.5
FAN08G1859 Fragaria x ananassa HOM05D004329 ORTHO05D005516 2.7e-170 602.4 443 73.1
unitig_32.g11043 Utricularia gibba HOM05D004329 ORTHO05D005516 2.7e-170 602.4 442 69.2
Cpa.g.sc13.162 Carica papaya HOM05D004329 ORTHO05D005516 1.5e-168 596.7 474 67.9
arahy.Tifrunner.gnm1.ann1.IBL9WM Arachis hypogaea HOM05D004329 ORTHO05D005516 1.9e-168 596.3 439 70.4
arahy.Tifrunner.gnm1.ann1.HJ5J7F Arachis hypogaea HOM05D004329 ORTHO05D005516 4.3e-168 595.1 436 70.9
SGA_v2.0_scaffold40G15626 Striga asiatica HOM05D004329 ORTHO05D005516 4.3e-168 595.1 459 69.5
FAN04G0329 Fragaria x ananassa HOM05D004329 ORTHO05D005516 9.7e-168 594.0 438 73.3
SalBow1G7365 Salvia bowleyana HOM05D004329 ORTHO05D005516 2.8e-167 592.4 458 69.7
PSO478G2811 Papaver somniferum HOM05D004329 ORTHO05D005516 3.4e-165 585.5 440 68.2
PSO017G7154 Papaver somniferum HOM05D004329 ORTHO05D005516 2.2e-164 582.8 440 67.5
Glyma.08G008000 Glycine max HOM05D004329 ORTHO05D005516 3.8e-164 582.0 403 74.2
PSO081G0143 Papaver somniferum HOM05D004329 ORTHO05D005516 1.0e-161 573.9 440 66.8
CDE04G3457 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 5.5e-155 551.6 441 65.1
AUR62041693 Chenopodium quinoa HOM05D004329 ORTHO05D005516 2.6e-152 542.7 432 66.4
Os08g0323000 Oryza sativa ssp. japonica HOM05D004329 ORTHO05D005516 1.3e-151 540.4 436 63.8
Cc00_g30130 Coffea canephora HOM05D004329 ORTHO05D005516 5.0e-148 528.5 281 98.9
SEGI_15405 Sequoiadendron giganteum HOM05D004329 ORTHO05D005516 6.5e-148 528.1 446 61.7
MBI13_g43178_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 8.5e-148 527.7 442 63.6
Zm00001eb327290 Zea mays HOM05D004329 ORTHO05D005516 1.1e-144 517.3 440 61.4
Manes.14G045200 Manihot esculenta HOM05D004329 ORTHO05D005516 3.7e-143 512.3 318 80.2
A02p41850 Brassica napus HOM05D004329 ORTHO05D005516 4.5e-141 505.4 367 71.1
CARHR275760 Cardamine hirsuta HOM05D004329 ORTHO05D005516 3.2e-139 499.2 318 77.4
HPP92_028710 Vanilla planifolia HOM05D004329 ORTHO05D005516 2.0e-128 463.4 405 59.8
Nitab4.5_0017885g0010 Nicotiana tabacum HOM05D004329 ORTHO05D005516 3.4e-128 462.6 332 74.1
C02p61780 Brassica napus HOM05D004329 ORTHO05D005516 1.4e-121 440.7 269 80.3
AUR62044173 Chenopodium quinoa HOM05D004329 ORTHO05D005516 1.8e-118 430.3 393 60.3
FAN18G2676 Fragaria x ananassa HOM05D004329 ORTHO05D005516 3.4e-112 409.5 342 66.1
AagrBONN_evm.TU.Sc2ySwM_228.1186 Anthoceros agrestis HOM05D004329 ORTHO05D005516 2.2e-111 406.8 449 49.4
Pp3c15_22190 Physcomitrium patens HOM05D004329 ORTHO05D005516 2.2e-111 406.8 447 49.2
Mapoly0153s0017 Marchantia polymorpha HOM05D004329 ORTHO05D005516 2.8e-106 389.8 440 46.8
Aqoxy5G01090 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 7.5e-104 381.7 437 49.9
CDE07G1247 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 5.6e-91 339.0 273 64.8
TAR622G0210 Trochodendron aralioides HOM05D004329 ORTHO05D005516 1.8e-89 334.0 318 58.8
CBR_g20988 Chara braunii HOM05D004329 ORTHO05D005516 2.5e-83 313.5 472 41.1
SMO356G0738 Selaginella moellendorffii HOM05D004329 ORTHO05D005516 5.3e-81 305.8 445 40.2
Ah.11g046840 Amaranthus hybridus HOM05D004329 ORTHO05D005516 2.1e-77 293.9 175 82.3
Nitab4.5_0009429g0030 Nicotiana tabacum HOM05D004329 ORTHO05D005516 1.8e-60 237.7 126 92.1
CSS0034501 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 5.0e-47 193.0 102 93.1
CSS0009974 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 2.5e-46 190.7 107 87.9
Cre06.g267100 Chlamydomonas reinhardtii HOM05D004329 ORTHO05D005516 6.5e-39 166.0 530 29.1
CDE07G0688 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 2.3e-36 157.5 88 84.1
MCO15G338 Micromonas commoda HOM05D004329 ORTHO05D005516 1.1e-33 148.7 422 29.1
AagrBONN_evm.TU.Sc2ySwM_228.1281 Anthoceros agrestis HOM05D004329 ORTHO05D005516 8.5e-31 139.0 120 55.8
AagrBONN_evm.TU.Sc2ySwM_228.1280 Anthoceros agrestis HOM05D004329 ORTHO05D005516 8.8e-28 129.0 186 41.9
C02p61790 Brassica napus HOM05D004329 ORTHO05D005516 5.0e-23 113.2 98 61.2
CARHR275770 Cardamine hirsuta HOM05D004329 ORTHO05D005516 7.2e-22 109.4 99 56.6
Haze_22596 Corylus avellana HOM05D004329 ORTHO05D010424 1.8e-17 94.7 78 62.8
Lsat_1_v5_gn_2_122301 Lactuca sativa HOM05D009063 ORTHO05D011082 5.4e-17 93.2 219 36.1
Lsat_1_v5_gn_5_81961 Lactuca sativa HOM05D004329 ORTHO05D005516 1.2e-16 92.0 49 87.8
Lsat_1_v5_gn_8_114301 Lactuca sativa HOM05D004329 ORTHO05D005516 7.7e-16 89.4 48 87.5
CSS0048280 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 1.3e-15 88.6 95 54.7
CAN.G865.5 Capsicum annuum HOM05D004329 ORTHO05D005516 3.2e-14 84.0 67 58.2
Zm00001eb081410 Zea mays HOM05D004902 ORTHO05D006603 1.6e-13 81.6 71 52.1
Zm00001eb202340 Zea mays HOM05D004329 ORTHO05D005516 3.0e-12 77.4 71 49.3
PRCOL_00003443 Prasinoderma coloniale HOM05D004329 ORTHO05D005516 9.8e-11 72.4 472 22.9


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