Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g03090 Coffea canephora HOM05D002281 ORTHO05D006774 0.0e+00 1150.6 594 100.0
Nitab4.5_0006530g0020 Nicotiana tabacum HOM05D002281 ORTHO05D006774 5.0e-252 874.4 545 81.3
Nitab4.5_0001498g0040 Nicotiana tabacum HOM05D002281 ORTHO05D006774 1.6e-250 869.4 545 80.7
Sopen04g021370 Solanum pennellii HOM05D002281 ORTHO05D006774 2.0e-248 862.4 566 77.6
MSTRG.27429 Avicennia marina HOM05D002281 ORTHO05D006774 7.5e-248 860.5 509 83.3
Solyc04g050540.4 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.3e-247 859.8 566 77.2
Oeu001246.1 Olea europaea HOM05D002281 ORTHO05D006774 3.7e-247 858.2 494 84.6
GSVIVG01026351001 Vitis vinifera HOM05D002281 ORTHO05D006774 1.2e-245 853.2 565 76.8
CAN.G131.14 Capsicum annuum HOM05D002281 ORTHO05D006774 2.9e-244 848.6 564 75.7
Actinidia06827 Actinidia chinensis HOM05D002281 ORTHO05D006774 5.5e-243 844.3 563 77.3
Lj2C48G13 Lonicera japonica HOM05D002281 ORTHO05D006774 6.1e-242 840.9 563 76.6
SGA_v2.0_scaffold62G21474 Striga asiatica HOM05D002281 ORTHO05D006774 3.0e-241 838.6 553 76.3
PGR142G3453 Punica granatum HOM05D002281 ORTHO05D006774 5.2e-241 837.8 498 82.3
CSS0040843 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 2.6e-240 835.5 564 76.6
Migut.F02048 Erythranthe guttata HOM05D002281 ORTHO05D006774 1.4e-238 829.7 568 74.1
Eucgr.B02168 Eucalyptus grandis HOM05D002281 ORTHO05D006774 4.1e-238 828.2 500 81.2
CiPaw.07G076800 Carya illinoinensis HOM05D002281 ORTHO05D006774 1.2e-237 826.6 497 81.7
TAR365G0274 Trochodendron aralioides HOM05D002281 ORTHO05D006774 4.5e-237 824.7 494 81.2
Nn3g19861 Nelumbo nucifera HOM05D002281 ORTHO05D006774 2.2e-236 822.4 494 82.0
Manes.09G145600 Manihot esculenta HOM05D002281 ORTHO05D006774 5.0e-236 821.2 499 81.0
RcHm_v2.0_Chr3g0448921 Rosa chinensis HOM05D002281 ORTHO05D006774 1.1e-235 820.1 492 80.7
AUR62006996 Chenopodium quinoa HOM05D002281 ORTHO05D006774 2.5e-235 818.9 547 77.0
COL.COLO4_38180 Corchorus olitorius HOM05D002281 ORTHO05D006774 5.5e-235 817.8 506 79.2
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 9.4e-235 817.0 492 80.7
Thecc.05G264900 Theobroma cacao HOM05D002281 ORTHO05D006774 9.4e-235 817.0 564 74.8
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 1.2e-234 816.6 492 80.5
EL10Ac4g09786 Beta vulgaris HOM05D002281 ORTHO05D006774 1.6e-234 816.2 496 81.2
FvH4_6g01350 Fragaria vesca HOM05D002281 ORTHO05D006774 1.6e-234 816.2 492 80.7
Gohir.A13G103100 Gossypium hirsutum HOM05D002281 ORTHO05D006774 2.1e-234 815.8 540 74.8
Ciclev10023441m.g Citrus clementina HOM05D002281 ORTHO05D006774 3.6e-234 815.1 497 79.7
Gorai.013G119100 Gossypium raimondii HOM05D002281 ORTHO05D006774 3.6e-234 815.1 494 80.4
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 4.7e-234 814.7 492 80.5
Prupe.6G354700 Prunus persica HOM05D002281 ORTHO05D006774 4.7e-234 814.7 494 81.0
Gohir.D13G106200 Gossypium hirsutum HOM05D002281 ORTHO05D006774 6.1e-234 814.3 494 80.4
AUR62000641 Chenopodium quinoa HOM05D002281 ORTHO05D006774 8.0e-234 813.9 547 75.9
Sed0014107 Sechium edule HOM05D002281 ORTHO05D006774 8.0e-234 813.9 495 79.8
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.4e-233 813.1 492 80.5
Cfa006305 Carpinus fangiana HOM05D002281 ORTHO05D006774 2.3e-233 812.4 500 80.6
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 2.3e-233 812.4 492 80.3
PSO063G1810 Papaver somniferum HOM05D002281 ORTHO05D006774 2.3e-233 812.4 495 80.4
THA.LOC104820754 Tarenaya hassleriana HOM05D002281 ORTHO05D006774 5.2e-233 811.2 568 75.2
CANSAT54G2391 Cannabis sativa HOM05D002281 ORTHO05D006774 8.8e-233 810.4 494 80.4
Potri.019G025100 Populus trichocarpa HOM05D002281 ORTHO05D006774 1.2e-232 810.1 564 72.5
Aqoxy2G03815 Aquilegia oxysepala HOM05D002281 ORTHO05D006774 2.0e-232 809.3 494 80.2
Thhalv10020015m.g Eutrema salsugineum HOM05D002281 ORTHO05D006774 4.4e-232 808.1 567 73.9
Sp3g03170 Schrenkiella parvula HOM05D002281 ORTHO05D006774 5.7e-232 807.7 567 73.2
A01p40910 Brassica napus HOM05D002281 ORTHO05D006774 9.8e-232 807.0 508 76.8
BNapus_Darmor_BZH_scaffold_78p00800 Brassica napus HOM05D002281 ORTHO05D006774 9.8e-232 807.0 508 76.8
BraA01t04526Z Brassica rapa HOM05D002281 ORTHO05D006774 2.2e-231 805.8 508 76.6
MELO3C010108.2 Cucumis melo HOM05D002281 ORTHO05D006774 1.1e-230 803.5 566 71.6
CsaV3_1G044940 Cucumis sativus L. HOM05D002281 ORTHO05D006774 1.1e-230 803.5 495 79.4
PSO017G1794 Papaver somniferum HOM05D002281 ORTHO05D006774 1.8e-230 802.7 494 79.4
CARHR078410 Cardamine hirsuta HOM05D002281 ORTHO05D006774 7.0e-230 800.8 567 71.3
Lalb_Chr21g0311311 Lupinus albus HOM05D002281 ORTHO05D006774 7.0e-230 800.8 495 80.0
TWI60G1049 Tripterygium wilfordii HOM05D002281 ORTHO05D006774 1.6e-229 799.7 495 80.0
BcaC09g47811 Brassica carinata HOM05D002281 ORTHO05D006774 2.0e-229 799.3 508 76.0
Carub.0003s0347 Capsella rubella HOM05D002281 ORTHO05D006774 2.0e-229 799.3 567 73.0
Sabra19G0034700 Salix brachista HOM05D002281 ORTHO05D006774 2.0e-229 799.3 543 75.1
AL3G14240 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 2.7e-229 798.9 508 76.8
AT3G04260 Arabidopsis thaliana HOM05D002281 ORTHO05D006774 5.9e-229 797.7 567 71.1
Aa31LG5G14740 Aethionema arabicum HOM05D002281 ORTHO05D006774 1.0e-228 797.0 508 76.4
Atru.chr2.1137 Acer truncatum HOM05D002281 ORTHO05D006774 1.7e-228 796.2 494 78.3
Peaxi162Scf00071g00258 Petunia axillaris HOM05D002281 ORTHO05D006774 8.6e-228 793.9 564 74.3
Medtr1g079525 Medicago truncatula HOM05D002281 ORTHO05D006774 1.1e-227 793.5 492 79.7
Ca_09982_v3 Cicer arietinum L. HOM05D002281 ORTHO05D006774 3.3e-227 792.0 495 79.0
ATR0787G153 Amborella trichopoda HOM05D002281 ORTHO05D006774 9.5e-227 790.4 498 78.3
Psat6g141840 Pisum sativum HOM05D002281 ORTHO05D006774 3.0e-225 785.4 495 78.6
TPR.G31600 Trifolium pratense HOM05D002281 ORTHO05D006774 8.9e-225 783.9 494 78.1
VMungo0720G2591 Vigna mungo HOM05D002281 ORTHO05D006774 3.4e-224 781.9 495 78.2
arahy.Tifrunner.gnm1.ann1.BY82ZN Arachis hypogaea HOM05D002281 ORTHO05D006774 2.2e-223 779.2 498 77.3
Phvul.L002432 Phaseolus vulgaris HOM05D002281 ORTHO05D006774 9.2e-222 773.9 495 78.0
Glyma.20G221100 Glycine max HOM05D002281 ORTHO05D006774 1.2e-221 773.5 495 77.4
Glyma.10G168600 Glycine max HOM05D002281 ORTHO05D006774 3.5e-221 771.9 495 77.0
unitig_899.g14420 Utricularia gibba HOM05D002281 ORTHO05D006774 1.7e-220 769.6 509 77.6
MD04G1234900 Malus domestica HOM05D002281 ORTHO05D006774 6.6e-220 767.7 494 76.9
BcaNung04817 Brassica carinata HOM05D002281 ORTHO05D006774 3.7e-215 751.9 504 73.4
DCAR_027530 Daucus carota HOM05D002281 ORTHO05D006774 2.7e-213 745.7 496 74.8
Lj5g0010111 Lotus japonicus HOM05D002281 ORTHO05D006774 4.6e-213 745.0 495 74.9
HanXRQChr14g0434631 Helianthus annuus HOM05D002281 ORTHO05D006774 1.3e-212 743.4 495 72.9
Lsat_1_v5_gn_2_16580 Lactuca sativa HOM05D002281 ORTHO05D006774 1.7e-212 743.0 495 73.3
Dinv05783 Davidia involucrata HOM05D002281 ORTHO05D006774 2.5e-211 739.2 498 76.3
Zm00001eb046590 Zea mays HOM05D002281 ORTHO05D006774 7.3e-211 737.6 496 72.2
Os10g0462800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D006774 1.5e-208 729.9 496 71.8
ECA238G3638 Erigeron canadensis HOM05D002281 ORTHO05D006774 1.0e-204 717.2 483 72.3
Hund07166 Selenicereus undatus HOM05D002281 ORTHO05D006774 5.1e-204 714.9 494 73.5
HPP92_025553 Vanilla planifolia HOM05D002281 ORTHO05D006774 1.3e-196 690.3 498 70.1
arahy.Tifrunner.gnm1.ann1.76MSW2 Arachis hypogaea HOM05D002281 ORTHO05D006774 4.6e-189 665.2 498 69.1
SEGI_16679 Sequoiadendron giganteum HOM05D002281 ORTHO05D006774 6.7e-172 608.2 496 62.7
AagrBONN_evm.TU.Sc2ySwM_368.3437 Anthoceros agrestis HOM05D002281 ORTHO05D006774 1.8e-148 530.4 507 54.4
Mapoly0031s0123 Marchantia polymorpha HOM05D002281 ORTHO05D006774 2.2e-143 513.5 498 52.4
Sc16g0010030 Simmondsia chinensis HOM05D002281 ORTHO05D006774 8.2e-130 468.4 288 80.9
Sabra19G0037700 Salix brachista HOM05D002281 ORTHO05D006774 1.0e-127 461.5 280 79.3
Hma1.2p1_0123F.1_g058100 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 1.3e-127 461.1 280 81.4
Hma1.2p1_0123F.1_g058110 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 1.3e-127 461.1 280 81.4
SMO367G1266 Selaginella moellendorffii HOM05D002281 ORTHO05D006774 1.1e-126 458.0 503 48.1
Pp3c1_8170 Physcomitrium patens HOM05D002281 ORTHO05D006774 4.5e-112 409.5 501 44.5
vmacro19969 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 9.5e-102 375.2 306 70.6
CDE02G1511 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 7.0e-97 359.0 201 83.6
Cpa.g.sc51.34 Carica papaya HOM05D002281 ORTHO05D006774 2.7e-96 357.1 221 78.7
Actinidia39975 Actinidia chinensis HOM05D002281 ORTHO05D006774 3.2e-89 333.6 199 82.9
Hma1.2p1_0123F.1_g058090 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 9.2e-89 332.0 192 84.9
CBR_g7996 Chara braunii HOM05D002281 ORTHO05D006774 1.3e-87 328.2 498 36.9
Ah.13g065840 Amaranthus hybridus HOM05D002281 ORTHO05D006774 6.2e-85 319.3 195 80.5
Haze_04483 Corylus avellana HOM05D002281 ORTHO05D006774 4.0e-84 316.6 194 79.9
ClCG03G011350 Citrullus lanatus HOM05D002281 ORTHO05D006774 2.6e-83 313.9 193 78.2
Rhsim05G0169000 Rhododendron simsii HOM05D002281 ORTHO05D006774 5.2e-76 289.7 158 88.0
ClCG03G011380 Citrullus lanatus HOM05D002281 ORTHO05D006774 1.1e-70 271.9 155 83.9
QL03p033056 Quercus lobata HOM05D002281 ORTHO05D006774 2.9e-66 257.3 144 84.7
CDE02G2074 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 1.8e-63 248.1 132 87.1
Haze_04484 Corylus avellana HOM05D002281 ORTHO05D006774 4.0e-60 236.9 176 70.5
Hma1.2p1_0463F.1_g158160 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 7.4e-54 216.1 129 79.8
ClCG03G011370 Citrullus lanatus HOM05D002281 ORTHO05D006774 4.9e-50 203.4 111 87.4
vmacro19968 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 3.5e-48 197.2 103 87.4
vmacro19967 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 6.3e-45 186.4 100 85.0
Cpa.g.sc51.35 Carica papaya HOM05D002281 ORTHO05D006774 3.4e-35 154.1 81 87.7
RcHm_v2.0_Chr1g0330901 Rosa chinensis HOM05D002281 ORTHO05D006774 1.6e-19 102.1 53 90.6
Solyc01g015200.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 3.0e-15 87.8 79 50.6
Os10g0460900 Oryza sativa ssp. japonica HOM05D006403 ORTHO05D008130 6.7e-15 86.7 72 59.7
Os10g0461100 Oryza sativa ssp. japonica HOM05D002933 ORTHO05D007742 6.7e-15 86.7 72 59.7
CDE08G0752 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 8.8e-15 86.3 64 68.8
Solyc01g013970.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.5e-14 85.5 72 54.2
Actinidia39976 Actinidia chinensis HOM05D002281 ORTHO05D006774 2.8e-13 81.3 46 84.8
Cre12.g497350 Chlamydomonas reinhardtii HOM05D002281 ORTHO05D006774 5.5e-09 67.0 242 24.4
CSS0012562 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 2.1e-08 65.1 132 44.7
Zm00001eb328630 Zea mays HOM05D000001 ORTHO05D000003 2.3e-07 61.6 226 27.9
MELO3C009563.2 Cucumis melo HOM05D006596 ORTHO05D008497 4.4e-06 57.4 177 24.9
Sp2g21900 Schrenkiella parvula HOM05D003689 ORTHO05D003950 4.4e-06 57.4 161 27.3
Glyma.14G039600 Glycine max HOM05D004783 ORTHO05D005581 5.7e-06 57.0 224 21.4
Carub.0006s2350 Capsella rubella HOM05D003689 ORTHO05D003950 7.5e-06 56.6 161 26.7


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