Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g01710 Coffea canephora HOM05D004758 ORTHO05D006063 2.2e-88 329.3 223 100.0
Nn1g00147 Nelumbo nucifera HOM05D004758 ORTHO05D006063 2.6e-60 236.1 215 81.4
TAR375G0794 Trochodendron aralioides HOM05D004758 ORTHO05D006063 1.1e-58 230.7 215 67.9
DCAR_014578 Daucus carota HOM05D004758 ORTHO05D006063 3.2e-58 229.2 216 63.0
Migut.F00084 Erythranthe guttata HOM05D004758 ORTHO05D006063 9.2e-58 227.6 215 76.3
GSVIVG01024351001 Vitis vinifera HOM05D004758 ORTHO05D006063 2.3e-56 223.0 212 79.7
Cfa016059 Carpinus fangiana HOM05D004758 ORTHO05D006063 3.0e-56 222.6 211 73.9
ECA236G2519 Erigeron canadensis HOM05D004758 ORTHO05D006063 3.3e-55 219.2 215 67.4
Cpa.g.sc43.121 Carica papaya HOM05D004758 ORTHO05D006063 1.6e-54 216.9 216 64.8
Gohir.A13G156800 Gossypium hirsutum HOM05D004758 ORTHO05D006063 3.6e-54 215.7 215 63.3
Oeu038086.1 Olea europaea HOM05D004758 ORTHO05D006063 6.2e-54 214.9 217 77.0
Actinidia08754 Actinidia chinensis HOM05D004758 ORTHO05D006063 1.8e-53 213.4 215 66.0
TWI09G0087 Tripterygium wilfordii HOM05D004758 ORTHO05D006063 3.1e-53 212.6 215 65.6
CiPaw.05G215200 Carya illinoinensis HOM05D004758 ORTHO05D006063 1.2e-52 210.7 214 75.7
Aqoxy5G01707 Aquilegia oxysepala HOM05D004758 ORTHO05D006063 2.6e-52 209.5 217 74.7
Haze_00389 Corylus avellana HOM05D004758 ORTHO05D006063 3.4e-52 209.1 211 73.0
Sabra13G0073200 Salix brachista HOM05D004758 ORTHO05D006063 5.8e-52 208.4 216 63.9
Manes.09G127900 Manihot esculenta HOM05D004758 ORTHO05D006063 7.5e-52 208.0 215 60.5
Aqoxy3G02274 Aquilegia oxysepala HOM05D004758 ORTHO05D006063 9.8e-52 207.6 217 73.7
Aa31LG11G12880 Aethionema arabicum HOM05D004758 ORTHO05D006063 1.7e-51 206.8 221 61.1
THA.LOC104827198 Tarenaya hassleriana HOM05D004758 ORTHO05D006063 1.7e-51 206.8 219 62.6
Hma1.2p1_0419F.1_g149420 Hydrangea macrophylla HOM05D004758 ORTHO05D006063 2.2e-51 206.5 215 73.0
QL09p022998 Quercus lobata HOM05D004758 ORTHO05D006063 3.7e-51 205.7 215 73.0
Ah.05g168380 Amaranthus hybridus HOM05D004758 ORTHO05D006063 4.9e-51 205.3 218 69.3
Nitab4.5_0000108g0370 Nicotiana tabacum HOM05D004758 ORTHO05D006063 4.9e-51 205.3 163 73.0
Thhalv10012644m.g Eutrema salsugineum HOM05D004758 ORTHO05D006063 1.4e-50 203.8 216 62.0
COL.COLO4_37813 Corchorus olitorius HOM05D004758 ORTHO05D006063 1.9e-50 203.4 214 62.6
AL6G27760 Arabidopsis lyrata HOM05D004758 ORTHO05D006063 4.1e-50 202.2 216 61.6
BcaC03g18515 Brassica carinata HOM05D004758 ORTHO05D006063 4.1e-50 202.2 216 60.6
BolC2t06772H Brassica oleracea HOM05D004758 ORTHO05D006063 4.1e-50 202.2 216 60.6
Potri.013G079600 Populus trichocarpa HOM05D004758 ORTHO05D006063 5.4e-50 201.8 216 64.8
AT5G16750 Arabidopsis thaliana HOM05D004758 ORTHO05D006063 7.1e-50 201.4 216 61.6
HanXRQChr04g0115571 Helianthus annuus HOM05D004758 ORTHO05D006063 9.2e-50 201.1 218 62.8
Sp6g27370 Schrenkiella parvula HOM05D004758 ORTHO05D006063 9.2e-50 201.1 216 60.6
ATR0829G002 Amborella trichopoda HOM05D004758 ORTHO05D006063 1.2e-49 200.7 215 60.0
Atru.chr10.1076 Acer truncatum HOM05D004758 ORTHO05D006063 2.7e-49 199.5 215 70.7
Carub.0006s1497 Capsella rubella HOM05D004758 ORTHO05D006063 2.7e-49 199.5 216 60.6
vmacro06528 Vaccinium macrocarpon HOM05D004758 ORTHO05D006063 2.7e-49 199.5 212 64.6
Dinv29141 Davidia involucrata HOM05D004758 ORTHO05D006063 4.6e-49 198.7 215 74.4
Sc02g0003740 Simmondsia chinensis HOM05D004758 ORTHO05D006063 6.0e-49 198.4 215 60.9
SalBow4G2121 Salvia bowleyana HOM05D004758 ORTHO05D006063 7.8e-49 198.0 210 74.3
SalBow4G2875 Salvia bowleyana HOM05D004758 ORTHO05D006063 7.8e-49 198.0 210 74.3
AUR62026609 Chenopodium quinoa HOM05D004758 ORTHO05D006063 1.0e-48 197.6 211 52.6
CsaV3_1G037130 Cucumis sativus L. HOM05D004758 ORTHO05D006063 1.3e-48 197.2 215 61.4
Hund26668 Selenicereus undatus HOM05D004758 ORTHO05D006063 1.3e-48 197.2 216 63.0
CARHR196430 Cardamine hirsuta HOM05D004758 ORTHO05D006063 3.0e-48 196.1 216 60.2
AUR62034925 Chenopodium quinoa HOM05D004758 ORTHO05D006063 3.9e-48 195.7 215 61.9
ClCG09G017100 Citrullus lanatus HOM05D004758 ORTHO05D006063 3.9e-48 195.7 216 60.6
MELO3C002835.2 Cucumis melo HOM05D004758 ORTHO05D006063 5.1e-48 195.3 211 62.1
Sed0006906 Sechium edule HOM05D004758 ORTHO05D006063 6.6e-48 194.9 216 61.1
HPP92_020800 Vanilla planifolia HOM05D004758 ORTHO05D006063 8.6e-48 194.5 168 67.9
A02p03760 Brassica napus HOM05D004758 ORTHO05D006063 1.5e-47 193.7 216 58.8
BraA02t05341Z Brassica rapa HOM05D004758 ORTHO05D006063 1.5e-47 193.7 216 58.8
C02p08570 Brassica napus HOM05D004758 ORTHO05D006063 1.9e-47 193.4 216 59.3
Lsat_1_v5_gn_7_26400 Lactuca sativa HOM05D004758 ORTHO05D006063 7.3e-47 191.4 170 68.2
Psat4g058120 Pisum sativum HOM05D004758 ORTHO05D006063 2.1e-46 189.9 217 60.8
EL10Ac1g01635 Beta vulgaris HOM05D004758 ORTHO05D006063 8.1e-46 188.0 170 59.4
CAN.G1131.26 Capsicum annuum HOM05D004758 ORTHO05D006063 2.3e-45 186.4 216 73.1
Gorai.013G183600 Gossypium raimondii HOM05D004758 ORTHO05D006063 5.2e-45 185.3 215 59.1
MSTRG.26923 Avicennia marina HOM05D004758 ORTHO05D006063 1.2e-44 184.1 209 75.1
Medtr4g105700 Medicago truncatula HOM05D004758 ORTHO05D006063 1.5e-44 183.7 217 60.4
Solyc03g097160.4 Solanum lycopersicum HOM05D004758 ORTHO05D006063 2.0e-44 183.3 215 72.6
MBI04_g20348_MAGBIO Magnolia biondii HOM05D004758 ORTHO05D006063 2.6e-44 183.0 170 58.2
SGA_v2.0_scaffold18G08524 Striga asiatica HOM05D004758 ORTHO05D006063 4.4e-44 182.2 167 72.5
Ca_21920_v3 Cicer arietinum L. HOM05D004758 ORTHO05D006063 5.8e-44 181.8 217 59.4
Gohir.D13G161600 Gossypium hirsutum HOM05D004758 ORTHO05D006063 5.8e-44 181.8 215 58.6
CDE06G0148 Ceratophyllum demersum HOM05D004758 ORTHO05D006063 2.9e-43 179.5 217 69.1
SEGI_30407 Sequoiadendron giganteum HOM05D004758 ORTHO05D006063 4.9e-43 178.7 218 56.0
Thecc.05G217400 Theobroma cacao HOM05D004758 ORTHO05D006063 8.4e-43 177.9 213 58.2
Glyma.17G089100 Glycine max HOM05D004758 ORTHO05D006063 1.1e-42 177.6 214 57.9
BolC9t58865H Brassica oleracea HOM05D004758 ORTHO05D006063 1.9e-42 176.8 216 56.0
BcaC04g18853 Brassica carinata HOM05D004758 ORTHO05D006063 2.4e-42 176.4 216 56.0
BraA10t44306Z Brassica rapa HOM05D004758 ORTHO05D006063 2.4e-42 176.4 216 56.0
Lalb_Chr13g0297791 Lupinus albus HOM05D004758 ORTHO05D006063 2.4e-42 176.4 218 58.3
MD01G1069700 Malus domestica HOM05D004758 ORTHO05D000275 3.2e-42 176.0 119 71.4
Eucgr.K00076 Eucalyptus grandis HOM05D004758 ORTHO05D006063 4.1e-42 175.6 220 67.7
A10p22470 Brassica napus HOM05D004758 ORTHO05D006063 5.4e-42 175.3 216 55.6
C09p60320 Brassica napus HOM05D004758 ORTHO05D006063 7.1e-42 174.9 216 56.0
unitig_748.g6995 Utricularia gibba HOM05D004758 ORTHO05D006063 1.2e-41 174.1 103 79.6
VMungo1215G2684 Vigna mungo HOM05D004758 ORTHO05D006063 1.6e-41 173.7 217 56.2
Aa31LG11G12810 Aethionema arabicum HOM05D004758 ORTHO05D006063 3.5e-41 172.6 217 47.5
Lj3C885T17 Lonicera japonica HOM05D004758 ORTHO05D006063 3.5e-41 172.6 162 73.5
Lalb_Chr12g0201611 Lupinus albus HOM05D004758 ORTHO05D006063 4.6e-41 172.2 215 59.1
Prupe.2G326400 Prunus persica HOM05D004758 ORTHO05D006063 6.6e-40 168.3 211 68.7
CANSAT21G1832 Cannabis sativa HOM05D004758 ORTHO05D006063 1.9e-39 166.8 111 69.4
COL.COLO4_14499 Corchorus olitorius HOM05D004758 ORTHO05D006063 1.9e-39 166.8 121 66.9
Glyma.05G038000 Glycine max HOM05D004758 ORTHO05D006063 1.9e-39 166.8 214 56.1
MD07G1309100 Malus domestica HOM05D004758 ORTHO05D006063 9.6e-39 164.5 211 68.2
Peaxi162Scf00516g00672 Petunia axillaris HOM05D004758 ORTHO05D006063 9.6e-39 164.5 170 70.6
Lj4g0021664 Lotus japonicus HOM05D004758 ORTHO05D006063 3.6e-38 162.5 221 54.3
MD01G1236400 Malus domestica HOM05D004758 ORTHO05D006063 4.7e-38 162.2 108 72.2
RcHm_v2.0_Chr1g0384241 Rosa chinensis HOM05D004758 ORTHO05D006063 4.7e-38 162.2 212 54.7
Phvul.003G200800 Phaseolus vulgaris HOM05D004758 ORTHO05D006063 1.4e-37 160.6 217 54.4
arahy.Tifrunner.gnm1.ann1.MVA0XP Arachis hypogaea HOM05D004758 ORTHO05D006063 6.9e-37 158.3 217 55.3
Zm00001eb072270 Zea mays HOM05D004758 ORTHO05D006063 3.8e-35 152.5 224 64.3
Nitab4.5_0004530g0070 Nicotiana tabacum HOM05D004758 ORTHO05D006063 4.9e-35 152.1 162 68.5
Sopen03g027900 Solanum pennellii HOM05D004758 ORTHO05D006063 4.9e-35 152.1 215 67.4
Zm00001eb429930 Zea mays HOM05D004758 ORTHO05D006063 4.9e-35 152.1 225 64.0
arahy.Tifrunner.gnm1.ann1.64XA74 Arachis hypogaea HOM05D004758 ORTHO05D006063 1.4e-34 150.6 166 63.9
Os04g0592700 Oryza sativa ssp. japonica HOM05D004758 ORTHO05D006063 3.2e-34 149.4 233 61.4
TPR.G37444 Trifolium pratense HOM05D004758 ORTHO05D006063 3.2e-34 149.4 217 55.3
BcaNung04954 Brassica carinata HOM05D004758 ORTHO05D006063 1.0e-32 144.4 97 70.1
Nitab4.5_0000021g0710 Nicotiana tabacum HOM05D004758 ORTHO05D006063 1.0e-32 144.4 162 67.3
CSS0042937 Camellia sinensis var. sinensis HOM05D004758 ORTHO05D006063 8.7e-32 141.4 156 64.7
SHI02547 Sapria himalayana HOM05D004758 ORTHO05D006063 2.5e-31 139.8 110 60.0
AUR62013586 Chenopodium quinoa HOM05D004758 ORTHO05D006063 1.1e-29 134.4 86 77.9
PSO063G1271 Papaver somniferum HOM05D004758 ORTHO05D006063 1.2e-28 131.0 216 61.1
CBR_g29896 Chara braunii HOM05D004758 ORTHO05D006063 4.9e-27 125.6 213 50.2
Pp3c19_12460 Physcomitrium patens HOM05D004758 ORTHO05D006063 2.4e-26 123.2 217 45.2
FvH4_7g34000 Fragaria vesca HOM05D004758 ORTHO05D006063 2.7e-25 119.8 91 65.9
SMO358G0628 Selaginella moellendorffii HOM05D004758 ORTHO05D006063 3.9e-24 115.9 210 44.3
Ciclev10018804m.g Citrus clementina HOM05D004758 ORTHO05D006063 4.3e-23 112.5 88 63.6
PSO782G4173 Papaver somniferum HOM05D004758 ORTHO05D006063 7.4e-23 111.7 89 66.3
FAN10G3249 Fragaria x ananassa HOM05D004758 ORTHO05D006063 3.6e-22 109.4 211 55.9
FAN01G1935 Fragaria x ananassa HOM05D004758 ORTHO05D006063 4.8e-22 109.0 211 46.4
FAN03G1445 Fragaria x ananassa HOM05D004758 ORTHO05D006063 1.2e-20 104.4 83 63.9
Mapoly0155s0010 Marchantia polymorpha HOM05D004758 ORTHO05D006063 6.4e-19 98.6 217 53.0
Cre07.g344050 Chlamydomonas reinhardtii HOM05D004758 ORTHO05D006063 9.3e-18 94.7 249 32.5
MCO16G091 Micromonas commoda HOM05D004758 ORTHO05D006063 8.4e-11 71.6 163 41.1
AUR62013587 Chenopodium quinoa HOM05D004758 ORTHO05D006063 1.3e-06 57.8 151 30.5


User provided reference genes

Program Settings