Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 0.0e+00 1180.2 602 100.0
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 1.3e-276 956.1 607 79.2
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 2.1e-274 948.7 607 78.7
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 1.7e-271 939.1 607 78.3
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 9.2e-270 933.3 607 78.1
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 9.2e-270 933.3 606 77.7
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 1.6e-269 932.6 607 77.3
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.1e-267 926.4 599 78.0
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 2.1e-266 922.2 604 76.2
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 8.0e-266 920.2 621 75.8
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 4.0e-265 917.9 604 75.3
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 1.3e-263 912.9 602 77.6
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 3.2e-262 908.3 602 76.6
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 4.1e-262 907.9 602 74.9
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 5.4e-262 907.5 606 75.7
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 2.0e-261 905.6 608 74.0
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 6.0e-261 904.0 599 75.0
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 1.5e-259 899.4 606 75.6
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 1.9e-259 899.0 605 74.9
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 2.5e-259 898.7 610 75.6
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 7.3e-259 897.1 634 73.3
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 7.3e-259 897.1 604 75.2
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 6.2e-258 894.0 639 72.1
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 3.2e-254 881.7 606 74.4
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 7.1e-254 880.6 600 74.7
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 2.7e-253 878.6 603 72.5
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 3.5e-253 878.2 606 74.1
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 1.7e-252 875.9 606 73.8
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 1.1e-251 873.2 603 74.3
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 1.2e-250 869.8 604 73.7
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 1.2e-250 869.8 586 75.3
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 3.6e-250 868.2 601 74.2
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 2.6e-248 862.1 602 73.3
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 9.9e-248 860.1 543 80.1
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 6.4e-247 857.4 602 70.6
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 6.0e-245 850.9 607 71.3
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 6.0e-245 850.9 602 71.1
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 1.1e-243 846.7 617 69.0
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 5.6e-243 844.3 602 69.6
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 1.2e-242 843.2 598 70.4
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 4.0e-241 838.2 615 69.8
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 2.0e-240 835.9 602 70.9
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 3.4e-240 835.1 600 69.7
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 2.9e-239 832.0 607 69.7
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 2.9e-239 832.0 603 69.2
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 6.4e-239 830.9 606 70.6
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 6.4e-239 830.9 609 68.6
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 7.1e-238 827.4 606 67.7
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 1.6e-237 826.2 601 67.7
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 1.6e-237 826.2 607 68.9
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 2.1e-237 825.9 602 68.1
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 2.7e-237 825.5 599 68.3
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 4.6e-237 824.7 599 68.9
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 6.0e-237 824.3 597 68.7
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 6.0e-237 824.3 600 69.0
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 1.0e-236 823.5 603 68.7
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 6.6e-236 820.8 600 68.2
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 8.7e-236 820.5 600 68.3
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 1.1e-235 820.1 581 70.6
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 3.3e-235 818.5 593 69.5
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 4.3e-235 818.1 600 68.0
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 4.3e-235 818.1 602 68.1
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 9.6e-235 817.0 600 67.8
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 1.3e-234 816.6 600 68.0
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 2.8e-234 815.5 600 68.3
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 3.6e-234 815.1 600 66.7
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 3.6e-234 815.1 600 67.8
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 3.6e-234 815.1 600 68.2
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 6.2e-234 814.3 603 67.8
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 4.0e-233 811.6 571 70.4
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 2.0e-232 809.3 603 67.3
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 7.6e-232 807.4 604 69.4
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 9.9e-232 807.0 604 68.4
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 9.3e-230 800.4 609 67.0
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 1.0e-228 797.0 600 67.0
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 3.0e-228 795.4 609 66.5
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 1.1e-227 793.5 602 66.6
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 1.1e-227 793.5 624 65.2
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 1.3e-226 790.0 603 65.7
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 3.6e-226 788.5 619 64.9
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 6.2e-226 787.7 601 66.2
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 6.9e-225 784.3 609 66.3
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 6.9e-225 784.3 606 66.0
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 1.2e-224 783.5 606 65.8
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 7.6e-224 780.8 559 69.1
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 7.6e-224 780.8 525 75.8
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 3.8e-223 778.5 610 64.3
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 3.8e-223 778.5 601 65.9
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 1.1e-222 776.9 603 65.5
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 2.7e-221 772.3 606 65.0
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 1.1e-219 766.9 605 64.5
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 3.3e-219 765.4 604 63.7
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 4.3e-219 765.0 609 65.5
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 1.3e-218 763.5 596 65.1
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 1.6e-218 763.1 600 65.2
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 3.7e-218 761.9 600 64.5
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 4.0e-217 758.4 597 64.2
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 2.6e-216 755.7 597 64.0
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 1.4e-214 750.0 606 63.5
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 9.3e-214 747.3 550 67.6
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 2.7e-213 745.7 598 66.4
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 6.0e-213 744.6 598 65.4
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 1.1e-211 740.3 609 63.4
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 9.6e-211 737.3 605 63.1
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 1.8e-209 733.0 604 62.9
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 2.6e-208 729.2 588 65.0
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 4.5e-208 728.4 609 63.9
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 5.5e-206 721.5 605 61.5
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 3.5e-205 718.8 605 61.2
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 3.5e-205 718.8 605 61.2
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.5e-203 713.4 605 61.0
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 3.7e-202 708.8 605 60.7
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 1.1e-201 707.2 600 61.3
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 1.2e-200 703.7 603 60.5
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 6.5e-199 698.0 601 61.4
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 4.8e-194 681.8 600 59.0
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 1.8e-193 679.9 596 59.2
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 2.0e-187 659.8 606 60.1
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 1.3e-183 647.1 601 57.6
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 1.2e-173 614.0 596 54.0
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 2.1e-173 613.2 625 52.8
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 4.0e-172 609.0 606 52.8
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 5.7e-171 605.1 470 66.8
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 7.5e-163 578.2 446 66.6
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 2.0e-155 553.5 606 49.5
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 5.9e-152 542.0 397 71.5
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 1.1e-142 511.1 736 42.9
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.1e-129 468.0 330 72.7
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 1.7e-127 460.7 514 50.2
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 1.9e-126 457.2 321 70.7
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 5.4e-121 439.1 458 48.5
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 1.6e-120 437.6 629 40.7
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 2.0e-115 420.6 361 62.9
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 9.9e-115 418.3 614 41.7
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.2e-112 411.4 358 61.5
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 3.9e-87 326.6 270 63.7
Haze_26879 Corylus avellana HOM05D004159 ORTHO05D005858 5.3e-84 316.2 485 39.6
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 4.2e-73 280.0 498 36.9
Psat1g081880 Pisum sativum HOM05D004159 ORTHO05D019349 1.0e-71 275.4 198 69.7
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 4.4e-70 270.0 220 60.0
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 8.2e-69 265.8 187 72.7
Sc03g0007510 Simmondsia chinensis HOM05D004159 ORTHO05D005858 3.3e-62 243.8 165 73.9
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 5.7e-62 243.0 136 83.1
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 2.4e-52 211.1 394 38.8
Gohir.D06G181800 Gossypium hirsutum HOM05D004159 ORTHO05D021100 5.4e-44 183.3 119 73.1
MD10G1043900 Malus domestica HOM05D004159 ORTHO05D036595 1.8e-39 168.3 129 65.1
Hma1.2p1_0078F.1_g040075 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.2e-38 165.6 98 83.7
Hma1.2p1_0078F.1_g040060 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 3.4e-38 164.1 98 82.7
Gorai.013G041700 Gossypium raimondii HOM05D004159 ORTHO05D005858 7.5e-38 162.9 115 68.7
Gohir.D13G037150 Gossypium hirsutum HOM05D004159 ORTHO05D021100 9.8e-38 162.5 115 68.7
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 1.8e-36 158.3 182 53.3
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 1.1e-31 142.5 135 57.0
Actinidia33332 Actinidia chinensis HOM05D004159 ORTHO05D002141 5.8e-30 136.7 80 77.5
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 1.4e-28 132.1 219 41.6
Nitab4.5_0008375g0030 Nicotiana tabacum HOM05D004159 ORTHO05D285123 9.2e-28 129.4 134 57.5
SEGI_01298 Sequoiadendron giganteum HOM05D004159 ORTHO05D021100 4.6e-27 127.1 80 72.5
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 6.0e-27 126.7 184 48.4
RcHm_v2.0_Chr5g0047691 Rosa chinensis HOM05D004159 ORTHO05D036595 1.4e-23 115.5 86 67.4
Actinidia35769 Actinidia chinensis HOM05D004159 ORTHO05D021100 2.6e-22 111.3 121 57.9
MD13G1107200 Malus domestica HOM05D004159 ORTHO05D021100 2.5e-17 94.7 65 67.7
Lj2g0001382 Lotus japonicus HOM05D004159 ORTHO05D235994 6.2e-16 90.1 56 69.6
Medtr6g022550 Medicago truncatula HOM05D004159 ORTHO05D005858 9.9e-14 82.8 82 54.9
Medtr6g022570 Medicago truncatula HOM05D004159 ORTHO05D005858 1.1e-09 69.3 144 36.8
Zm00001eb053920 Zea mays HOM05D004159 ORTHO05D021100 4.3e-09 67.4 41 75.6
TAR636G1761 Trochodendron aralioides HOM05D004159 ORTHO05D415208 5.6e-09 67.0 75 48.0
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 5.6e-09 67.0 62 56.5
Gohir.D10G229800 Gossypium hirsutum HOM05D000561 ORTHO05D000514 1.6e-08 65.5 35 88.6


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