Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 6.0e-93 344.4 199 100.0
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 2.2e-66 256.1 198 79.3
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 3.3e-43 179.1 180 58.9
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 4.4e-43 178.7 178 52.8
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 2.2e-42 176.4 173 54.3
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 6.3e-42 174.9 175 56.6
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 1.8e-41 173.3 178 53.9
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 7.0e-41 171.4 183 53.0
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 9.1e-41 171.0 197 51.3
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 1.2e-40 170.6 181 53.0
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 1.2e-40 170.6 189 50.3
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 1.6e-40 170.2 189 50.3
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 3.5e-40 169.1 175 52.6
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 7.7e-40 167.9 170 53.5
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 7.7e-40 167.9 184 48.9
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 7.7e-40 167.9 170 52.9
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 1.0e-39 167.5 192 53.6
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 1.3e-39 167.2 175 54.9
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 1.7e-39 166.8 170 54.1
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 2.2e-39 166.4 188 51.1
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 2.9e-39 166.0 170 53.5
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.9e-39 166.0 170 53.5
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.9e-39 166.0 170 53.5
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 6.5e-39 164.9 176 51.7
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 1.1e-38 164.1 183 50.3
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 1.5e-38 163.7 172 53.5
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 1.5e-38 163.7 183 50.3
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.5e-38 162.9 170 52.9
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 2.5e-38 162.9 183 50.8
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 3.2e-38 162.5 172 53.5
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 3.2e-38 162.5 183 50.3
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 3.2e-38 162.5 170 52.4
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 4.2e-38 162.2 109 71.6
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 4.2e-38 162.2 169 53.3
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 5.5e-38 161.8 184 48.9
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 7.2e-38 161.4 170 51.2
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 9.4e-38 161.0 170 51.8
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 1.2e-37 160.6 178 50.6
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 2.1e-37 159.8 181 50.3
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 3.6e-37 159.1 172 51.7
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 6.1e-37 158.3 175 51.4
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 6.1e-37 158.3 186 48.9
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 6.1e-37 158.3 185 50.3
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 8.0e-37 157.9 172 52.3
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 1.4e-36 157.1 186 48.9
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 1.8e-36 156.8 172 51.7
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 2.3e-36 156.4 183 48.6
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 3.0e-36 156.0 170 47.6
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 4.0e-36 155.6 170 50.6
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 4.0e-36 155.6 170 51.2
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 4.0e-36 155.6 207 45.4
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 5.2e-36 155.2 170 50.6
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 5.2e-36 155.2 172 51.2
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 6.8e-36 154.8 173 49.7
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 8.8e-36 154.5 173 50.3
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 8.8e-36 154.5 184 50.5
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 2.0e-35 153.3 128 60.9
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 2.6e-35 152.9 180 48.9
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 2.6e-35 152.9 172 52.3
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 2.6e-35 152.9 173 49.1
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 3.4e-35 152.5 172 47.7
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 3.4e-35 152.5 172 50.0
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 3.4e-35 152.5 179 46.4
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 4.4e-35 152.1 170 51.8
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 4.4e-35 152.1 170 50.0
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 5.7e-35 151.8 172 49.4
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 5.7e-35 151.8 192 46.4
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 7.5e-35 151.4 181 48.1
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 7.5e-35 151.4 179 48.6
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 7.5e-35 151.4 198 47.0
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 9.8e-35 151.0 177 48.0
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 9.8e-35 151.0 188 44.7
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 1.3e-34 150.6 171 49.1
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 1.7e-34 150.2 110 67.3
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 2.2e-34 149.8 172 49.4
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 2.8e-34 149.4 172 48.8
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 2.8e-34 149.4 174 45.4
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 4.8e-34 148.7 178 47.8
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 6.3e-34 148.3 170 50.0
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 1.8e-33 146.7 181 49.2
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 1.8e-33 146.7 171 47.4
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 4.1e-33 145.6 173 46.8
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 1.6e-32 143.7 174 49.4
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 1.6e-32 143.7 169 47.9
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 2.7e-32 142.9 102 69.6
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 4.5e-32 142.1 171 47.4
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 2.2e-31 139.8 176 43.8
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 2.9e-31 139.4 169 46.2
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 7.2e-30 134.8 108 65.7
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 1.6e-29 133.7 177 45.2
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.8e-28 130.2 102 61.8
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 5.2e-28 128.6 175 45.1
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 4.4e-27 125.6 108 55.6
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 1.2e-24 117.5 86 67.4
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 4.5e-24 115.5 191 40.8
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 7.8e-24 114.8 128 56.2
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.9e-22 110.2 174 40.2
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 2.5e-22 109.8 123 47.2
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 1.6e-21 107.1 82 61.0
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 6.1e-21 105.1 111 45.9
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 5.2e-20 102.1 100 51.0
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 1.8e-17 93.6 83 53.0
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 5.4e-17 92.0 65 67.7
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 7.8e-16 88.2 105 40.0
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 1.0e-15 87.8 79 59.5
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 1.0e-15 87.8 79 59.5
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 1.0e-15 87.8 174 35.1
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 1.3e-15 87.4 64 65.6
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.7e-15 87.0 64 65.6
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 5.6e-14 82.0 83 44.6
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 9.5e-14 81.3 64 59.4
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 2.8e-13 79.7 102 43.1
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 3.6e-13 79.3 56 67.9
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 2.3e-12 76.6 59 61.0
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 2.3e-12 76.6 59 61.0
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 3.1e-12 76.3 107 37.4
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 2.9e-10 69.7 100 38.0
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 3.7e-10 69.3 43 69.8
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 4.9e-10 68.9 98 41.8
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 3.2e-09 66.2 108 39.8


User provided reference genes

Program Settings