Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g11660 Coffea canephora HOM05D006724 ORTHO05D008514 3.4e-166 588.2 280 100.0
Dinv14945 Davidia involucrata HOM05D006724 ORTHO05D008514 1.2e-123 446.8 279 72.8
Actinidia18778 Actinidia chinensis HOM05D006724 ORTHO05D008514 7.8e-123 444.1 279 72.0
Hma1.2p1_0416F.1_g148420 Hydrangea macrophylla HOM05D006724 ORTHO05D008514 1.8e-119 433.0 275 72.4
QL08p023685 Quercus lobata HOM05D006724 ORTHO05D008514 9.0e-119 430.6 260 73.5
PGSC0003DMG400012400 Solanum tuberosum HOM05D006724 ORTHO05D008514 2.6e-118 429.1 276 72.5
Sopen07g030980 Solanum pennellii HOM05D006724 ORTHO05D008514 4.5e-118 428.3 276 72.5
Solyc07g062750.4 Solanum lycopersicum HOM05D006724 ORTHO05D008514 9.9e-118 427.2 276 72.5
Lj8C153G9 Lonicera japonica HOM05D006724 ORTHO05D008514 1.7e-117 426.4 279 69.5
Cfa020617 Carpinus fangiana HOM05D006724 ORTHO05D008514 4.9e-117 424.9 259 72.2
FvH4_3g19250 Fragaria vesca HOM05D006724 ORTHO05D008514 3.2e-116 422.2 259 70.7
FAN11G3114 Fragaria x ananassa HOM05D006724 ORTHO05D008514 3.2e-116 422.2 259 70.7
Rhsim04G0022800 Rhododendron simsii HOM05D006724 ORTHO05D008514 5.4e-116 421.4 278 69.8
CSS0014927 Camellia sinensis var. sinensis HOM05D006724 ORTHO05D008514 9.3e-116 420.6 277 69.0
CAN.G162.28 Capsicum annuum HOM05D006724 ORTHO05D008514 9.3e-116 420.6 278 70.1
CiPaw.11G166800 Carya illinoinensis HOM05D006724 ORTHO05D008514 9.3e-116 420.6 276 68.5
GSVIVG01014275001 Vitis vinifera HOM05D006724 ORTHO05D008514 1.2e-115 420.2 255 73.7
RcHm_v2.0_Chr5g0032321 Rosa chinensis HOM05D006724 ORTHO05D008514 2.7e-115 419.1 259 71.0
Prupe.4G173900 Prunus persica HOM05D006724 ORTHO05D008514 6.7e-114 414.5 258 71.7
MD11G1255900 Malus domestica HOM05D006724 ORTHO05D008514 1.1e-113 413.7 259 70.7
PSO832G3136 Papaver somniferum HOM05D006724 ORTHO05D008514 5.6e-113 411.4 269 67.7
Psat4g169400 Pisum sativum HOM05D006724 ORTHO05D008514 2.8e-112 409.1 260 71.2
Eucgr.F01176 Eucalyptus grandis HOM05D006724 ORTHO05D008514 4.0e-111 405.2 260 67.3
Lalb_Chr01g0006641 Lupinus albus HOM05D006724 ORTHO05D008514 6.9e-111 404.4 260 70.8
EL10Ac4g08255 Beta vulgaris HOM05D006724 ORTHO05D008514 9.0e-111 404.1 280 67.1
Haze_09388 Corylus avellana HOM05D006724 ORTHO05D008514 9.0e-111 404.1 259 70.7
HanXRQChr12g0364011 Helianthus annuus HOM05D006724 ORTHO05D008514 9.0e-111 404.1 277 68.2
SGA_v2.0_scaffold34G13794 Striga asiatica HOM05D006724 ORTHO05D008514 9.0e-111 404.1 286 66.1
TPR.G28169 Trifolium pratense HOM05D006724 ORTHO05D008514 1.2e-110 403.7 259 71.4
CANSAT35G1416 Cannabis sativa HOM05D006724 ORTHO05D008514 2.6e-110 402.5 275 65.1
FAN21G1177 Fragaria x ananassa HOM05D006724 ORTHO05D008514 2.6e-110 402.5 301 60.8
Lj3g0025660 Lotus japonicus HOM05D006724 ORTHO05D008514 4.5e-110 401.7 274 67.5
Thecc.07G098800 Theobroma cacao HOM05D006724 ORTHO05D008514 5.8e-110 401.4 274 68.2
Sc03g0010250 Simmondsia chinensis HOM05D006724 ORTHO05D008514 1.0e-109 400.6 274 65.3
THA.LOC104818095 Tarenaya hassleriana HOM05D006724 ORTHO05D008514 1.3e-109 400.2 259 68.7
Gorai.002G066900 Gossypium raimondii HOM05D006724 ORTHO05D008514 2.9e-109 399.1 260 68.1
FAN25G2812 Fragaria x ananassa HOM05D006724 ORTHO05D008514 6.4e-109 397.9 294 61.9
arahy.Tifrunner.gnm1.ann1.N2BE0G Arachis hypogaea HOM05D006724 ORTHO05D008514 8.4e-109 397.5 260 68.5
DCAR_017120 Daucus carota HOM05D006724 ORTHO05D008514 8.4e-109 397.5 260 68.8
Nitab4.5_0000246g0080 Nicotiana tabacum HOM05D006724 ORTHO05D008514 8.4e-109 397.5 328 60.4
arahy.Tifrunner.gnm1.ann1.WDE0T2 Arachis hypogaea HOM05D006724 ORTHO05D008514 4.2e-108 395.2 259 68.0
CsaV3_4G033360 Cucumis sativus L. HOM05D006724 ORTHO05D008514 9.3e-108 394.0 276 63.0
AL3G27530 Arabidopsis lyrata HOM05D006724 ORTHO05D008514 2.7e-107 392.5 259 68.0
Duzib213G0893 Durio zibethinus HOM05D006724 ORTHO05D008514 2.7e-107 392.5 276 65.6
SalBow8G1625 Salvia bowleyana HOM05D006724 ORTHO05D008514 2.7e-107 392.5 303 62.7
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 3.5e-107 392.1 262 67.6
Aqoxy4G00591 Aquilegia oxysepala HOM05D006724 ORTHO05D008514 3.5e-107 392.1 260 68.1
C05p52090 Brassica napus HOM05D006724 ORTHO05D008514 6.0e-107 391.3 275 63.6
ClCG11G017740 Citrullus lanatus HOM05D006724 ORTHO05D008514 6.0e-107 391.3 277 64.3
Medtr8g061030 Medicago truncatula HOM05D006724 ORTHO05D008514 1.0e-106 390.6 261 69.3
CARHR090120 Cardamine hirsuta HOM05D006724 ORTHO05D008514 1.3e-106 390.2 259 67.6
Nitab4.5_0000831g0090 Nicotiana tabacum HOM05D006724 ORTHO05D008514 1.8e-106 389.8 276 68.1
Aqoxy4G00685 Aquilegia oxysepala HOM05D006724 ORTHO05D008514 2.3e-106 389.4 260 67.7
BolC5t33894H Brassica oleracea HOM05D006724 ORTHO05D008514 2.3e-106 389.4 275 63.3
MELO3C025618.2 Cucumis melo HOM05D006724 ORTHO05D008514 3.0e-106 389.0 277 62.8
Sed0012116 Sechium edule HOM05D006724 ORTHO05D008514 3.0e-106 389.0 279 62.7
A05p34310 Brassica napus HOM05D006724 ORTHO05D008514 5.1e-106 388.3 280 62.9
Sp3g13350 Schrenkiella parvula HOM05D006724 ORTHO05D008514 5.1e-106 388.3 274 65.0
MSTRG.15243 Avicennia marina HOM05D006724 ORTHO05D008514 6.7e-106 387.9 286 64.7
BraA05t22252Z Brassica rapa HOM05D006724 ORTHO05D008514 8.7e-106 387.5 279 62.0
Carub.0003s1479 Capsella rubella HOM05D006724 ORTHO05D008514 8.7e-106 387.5 262 66.4
AT3G15140 Arabidopsis thaliana HOM05D006724 ORTHO05D008514 1.1e-105 387.1 259 66.4
Migut.M00774 Erythranthe guttata HOM05D006724 ORTHO05D008514 1.1e-105 387.1 290 64.5
BcaB06g29538 Brassica carinata HOM05D006724 ORTHO05D008514 1.5e-105 386.7 259 66.4
Potri.011G141300 Populus trichocarpa HOM05D006724 ORTHO05D008514 1.5e-105 386.7 267 64.0
PGR083G0421 Punica granatum HOM05D006724 ORTHO05D008514 1.5e-105 386.7 259 66.4
HPP92_003869 Vanilla planifolia HOM05D006724 ORTHO05D008514 1.9e-105 386.3 273 63.7
Glyma.06G234800 Glycine max HOM05D006724 ORTHO05D008514 2.5e-105 386.0 259 66.8
Phvul.011G156700 Phaseolus vulgaris HOM05D006724 ORTHO05D008514 4.3e-105 385.2 260 65.8
VMungo1127G0638 Vigna mungo HOM05D006724 ORTHO05D008514 2.1e-104 382.9 258 66.3
Ah.04g164500 Amaranthus hybridus HOM05D006724 ORTHO05D008514 2.8e-104 382.5 263 68.1
unitig_85.g27410 Utricularia gibba HOM05D006724 ORTHO05D008514 6.2e-104 381.3 273 65.2
Cpa.g.sc80.3 Carica papaya HOM05D006724 ORTHO05D006683 2.4e-103 379.4 242 69.0
AUR62019487 Chenopodium quinoa HOM05D006724 ORTHO05D008514 2.4e-103 379.4 253 67.6
Manes.03G104800 Manihot esculenta HOM05D006724 ORTHO05D008514 3.1e-103 379.0 264 65.5
Peaxi162Scf00069g01835 Petunia axillaris HOM05D006724 ORTHO05D008514 6.5e-101 371.3 250 70.0
Sabra11G0126900 Salix brachista HOM05D006724 ORTHO05D008514 6.5e-101 371.3 290 58.6
Lsat_1_v5_gn_9_98661 Lactuca sativa HOM05D006724 ORTHO05D008514 1.9e-100 369.8 279 64.2
ECA240G0540 Erigeron canadensis HOM05D006724 ORTHO05D008514 2.1e-99 366.3 243 70.8
Ciclev10010824m.g Citrus clementina HOM05D006724 ORTHO05D008514 6.1e-99 364.8 260 64.6
HPP92_003898 Vanilla planifolia HOM05D006724 ORTHO05D008514 1.5e-97 360.1 252 62.7
vmacro09520 Vaccinium macrocarpon HOM05D006724 ORTHO05D008514 1.9e-97 359.8 298 59.1
Zm00001eb281480 Zea mays HOM05D006724 ORTHO05D008514 1.5e-94 350.1 242 63.2
Atru.chr2.2388 Acer truncatum HOM05D006724 ORTHO05D008514 1.0e-93 347.4 246 66.7
AagrBONN_evm.TU.Sc2ySwM_340.295 Anthoceros agrestis HOM05D006724 ORTHO05D008514 1.3e-93 347.1 259 60.6
TWI32G0858 Tripterygium wilfordii HOM05D006724 ORTHO05D008514 1.3e-93 347.1 279 57.7
Gohir.D01G047400 Gossypium hirsutum HOM05D006724 ORTHO05D008514 7.2e-92 341.3 260 61.2
DCAR_017097 Daucus carota HOM05D006724 ORTHO05D008514 1.8e-90 336.7 257 58.0
DCAR_013127 Daucus carota HOM05D006724 ORTHO05D008514 2.2e-88 329.7 297 52.9
Gohir.A01G060866 Gossypium hirsutum HOM05D006724 ORTHO05D008514 1.4e-87 327.0 207 70.5
DCAR_013126 Daucus carota HOM05D006724 ORTHO05D008514 5.9e-86 321.6 243 59.7
Mapoly0005s0020 Marchantia polymorpha HOM05D006724 ORTHO05D008514 2.9e-85 319.3 280 53.2
Pp3c27_5050 Physcomitrium patens HOM05D006724 ORTHO05D008514 7.9e-83 311.2 259 54.1
AUR62036149 Chenopodium quinoa HOM05D006724 ORTHO05D008514 8.8e-82 307.8 201 67.2
SMO367G0863 Selaginella moellendorffii HOM05D006724 ORTHO05D008514 4.4e-81 305.4 266 57.1
Hma1.2p1_0416F.1_g148440 Hydrangea macrophylla HOM05D006724 ORTHO05D008514 9.7e-81 304.3 177 78.0
CBR_g4826 Chara braunii HOM05D000829 ORTHO05D008514 8.2e-80 301.2 264 51.5
FAN16G1823 Fragaria x ananassa HOM05D006724 ORTHO05D008514 2.3e-66 256.5 280 46.4
Gohir.A01G060932 Gossypium hirsutum HOM05D006724 ORTHO05D008514 5.2e-66 255.4 260 48.5
Ca_07350_v3 Cicer arietinum L. HOM05D006724 ORTHO05D008514 7.0e-63 245.0 222 53.6
unitig_86.g29838 Utricularia gibba HOM05D006724 ORTHO05D008514 1.8e-58 230.3 159 68.6
Nn1g04264 Nelumbo nucifera HOM05D006724 ORTHO05D008514 7.7e-54 214.9 137 69.3
CDE08G0827 Ceratophyllum demersum HOM05D006724 ORTHO05D008514 1.2e-51 207.6 144 63.9
ATR0602G031 Amborella trichopoda HOM05D006724 ORTHO05D008514 1.5e-49 200.7 150 63.3
arahy.Tifrunner.gnm1.ann1.60K44K Arachis hypogaea HOM05D006724 ORTHO05D008514 8.6e-45 184.9 187 49.2
Hund22831 Selenicereus undatus HOM05D006724 ORTHO05D008514 1.2e-41 174.5 111 69.4
Thhalv10021514m.g Eutrema salsugineum HOM05D006724 ORTHO05D008514 7.8e-38 161.8 106 68.9
Hund22832 Selenicereus undatus HOM05D006724 ORTHO05D008514 3.0e-37 159.8 126 60.3
TAR627G0912 Trochodendron aralioides HOM05D006724 ORTHO05D008514 2.1e-30 137.1 109 58.7
arahy.Tifrunner.gnm1.ann1.E3N302 Arachis hypogaea HOM05D006724 ORTHO05D008514 2.3e-29 133.7 156 44.9
Hma1.2p1_0416F.1_g148430 Hydrangea macrophylla HOM05D006724 ORTHO05D008514 1.9e-28 130.6 85 67.1
Nn1g07335 Nelumbo nucifera HOM05D006724 ORTHO05D008514 6.2e-27 125.6 84 73.8
Oeu019299.2 Olea europaea HOM05D006724 ORTHO05D008514 6.2e-27 125.6 103 57.3
Os06g0353400 Oryza sativa ssp. japonica HOM05D006724 ORTHO05D008514 2.0e-25 120.6 84 63.1
Cc04_g14120 Coffea canephora HOM05D006724 ORTHO05D008514 4.3e-20 102.8 51 98.0
Eucgr.J00681 Eucalyptus grandis HOM05D005005 ORTHO05D006178 1.6e-19 100.9 219 27.9
Ca_24305_v3 Cicer arietinum L. HOM05D006724 ORTHO05D008514 2.1e-19 100.5 63 74.6
Hund07434 Selenicereus undatus HOM05D005005 ORTHO05D006178 2.1e-19 100.5 216 28.2
Hund21969 Selenicereus undatus HOM05D005005 ORTHO05D006178 2.1e-19 100.5 204 28.4
PSO384G4770 Papaver somniferum HOM05D005005 ORTHO05D006178 4.7e-19 99.4 213 26.8
PSO339G0382 Papaver somniferum HOM05D005005 ORTHO05D006178 8.1e-19 98.6 213 26.8
CBR_g41532 Chara braunii HOM05D005005 ORTHO05D006178 1.1e-18 98.2 204 27.9
Atru.chr3.3001 Acer truncatum HOM05D005005 ORTHO05D006178 1.4e-18 97.8 204 27.9
ATR1096G052 Amborella trichopoda HOM05D005005 ORTHO05D006178 1.4e-18 97.8 211 26.5
Eucgr.G03212 Eucalyptus grandis HOM05D005005 ORTHO05D006178 1.4e-18 97.8 210 28.1
MBI19_g20792_MAGBIO Magnolia biondii HOM05D005005 ORTHO05D006178 1.4e-18 97.8 203 27.6
Sc06g0004720 Simmondsia chinensis HOM05D005005 ORTHO05D006178 1.4e-18 97.8 213 27.2
TAR633G0536 Trochodendron aralioides HOM05D005005 ORTHO05D006178 1.4e-18 97.8 207 27.1
DCAR_025325 Daucus carota HOM05D005005 ORTHO05D006178 1.8e-18 97.4 212 25.9
GSVIVG01037328001 Vitis vinifera HOM05D005005 ORTHO05D006178 1.8e-18 97.4 214 27.1
Nn7g36763 Nelumbo nucifera HOM05D005005 ORTHO05D006178 2.4e-18 97.1 214 26.2
PGR119G1568 Punica granatum HOM05D005005 ORTHO05D006178 2.4e-18 97.1 223 26.5
AUR62006554 Chenopodium quinoa HOM05D005005 ORTHO05D006178 3.1e-18 96.7 204 27.5
EL10Ac4g10102 Beta vulgaris HOM05D005005 ORTHO05D006178 4.0e-18 96.3 203 27.6
MD07G1045900 Malus domestica HOM05D005005 ORTHO05D006178 5.2e-18 95.9 204 27.5
Duzib128G0392 Durio zibethinus HOM05D005005 ORTHO05D006178 6.8e-18 95.5 204 27.9
HanXRQChr11g0341211 Helianthus annuus HOM05D005005 ORTHO05D006178 8.9e-18 95.1 204 27.9
AUR62000208 Chenopodium quinoa HOM05D005005 ORTHO05D006178 1.2e-17 94.7 204 27.5
SEGI_32986 Sequoiadendron giganteum HOM05D005005 ORTHO05D006178 3.8e-16 89.7 212 25.9
CDE02G0934 Ceratophyllum demersum HOM05D006724 ORTHO05D008514 8.4e-16 88.6 62 64.5
SGA_v2.0_scaffold232G43481 Striga asiatica HOM05D005005 ORTHO05D006178 3.2e-15 86.7 199 27.6
Os01g0618000 Oryza sativa ssp. japonica HOM05D005005 ORTHO05D006178 1.6e-14 84.3 204 28.4
unitig_86.g29839 Utricularia gibba HOM05D006724 ORTHO05D008514 3.5e-14 83.2 68 55.9
Ciclev10027284m.g Citrus clementina HOM05D005005 ORTHO05D006178 2.1e-11 73.9 205 24.4
SGA_v2.0_scaffold79G25606 Striga asiatica HOM05D006724 ORTHO05D008514 1.3e-08 64.7 59 50.8


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