Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g13220 Coffea canephora HOM05D004839 ORTHO05D006012 2.7e-304 1048.1 633 100.0
Dinv17400 Davidia involucrata HOM05D004839 ORTHO05D006012 1.7e-218 763.1 638 76.3
Dinv10521 Davidia involucrata HOM05D004839 ORTHO05D006012 6.4e-205 718.0 541 78.9
Actinidia25779 Actinidia chinensis HOM05D004839 ORTHO05D006012 2.1e-200 703.0 636 74.1
CSS0002450 Camellia sinensis var. sinensis HOM05D004839 ORTHO05D006012 1.3e-197 693.7 641 73.9
Nn4g23407 Nelumbo nucifera HOM05D004839 ORTHO05D006012 5.4e-196 688.3 637 70.5
Ciclev10019267m.g Citrus clementina HOM05D004839 ORTHO05D006012 1.9e-193 679.9 648 67.9
SalBow5G5272 Salvia bowleyana HOM05D004839 ORTHO05D006012 1.9e-193 679.9 637 69.9
Migut.D01694 Erythranthe guttata HOM05D004839 ORTHO05D006012 9.5e-193 677.6 638 69.6
PGR044G2204 Punica granatum HOM05D004839 ORTHO05D006012 1.4e-191 673.7 652 67.8
Gorai.008G198100 Gossypium raimondii HOM05D004839 ORTHO05D006012 8.9e-191 671.0 645 69.3
QL10p019188 Quercus lobata HOM05D004839 ORTHO05D006012 1.2e-190 670.6 640 67.8
Haze_07703 Corylus avellana HOM05D004839 ORTHO05D006012 2.6e-190 669.5 641 69.4
Gohir.D12G184700 Gossypium hirsutum HOM05D004839 ORTHO05D006012 1.3e-189 667.2 645 69.0
Duzib205G0813 Durio zibethinus HOM05D004839 ORTHO05D006012 4.9e-189 665.2 642 68.1
TWI81G0494 Tripterygium wilfordii HOM05D004839 ORTHO05D006012 1.1e-188 664.1 638 67.2
Gohir.A12G181900 Gossypium hirsutum HOM05D004839 ORTHO05D006012 3.2e-188 662.5 645 69.0
TAR622G0763 Trochodendron aralioides HOM05D004839 ORTHO05D006012 3.2e-188 662.5 637 68.3
TAR374G0643 Trochodendron aralioides HOM05D004839 ORTHO05D006012 4.1e-188 662.1 637 66.6
Atru.chr9.403 Acer truncatum HOM05D004839 ORTHO05D006012 5.4e-188 661.8 643 66.9
MSTRG.11357 Avicennia marina HOM05D004839 ORTHO05D006012 6.0e-187 658.3 638 67.6
Manes.14G084900 Manihot esculenta HOM05D004839 ORTHO05D006012 5.1e-186 655.2 639 65.7
Lj5A104T41 Lonicera japonica HOM05D004839 ORTHO05D006012 7.3e-185 651.4 637 64.8
Lsat_1_v5_gn_1_13541 Lactuca sativa HOM05D004839 ORTHO05D006012 2.1e-184 649.8 566 69.4
ECA246G0121 Erigeron canadensis HOM05D004839 ORTHO05D006012 2.8e-184 649.4 638 66.0
Nitab4.5_0001410g0060 Nicotiana tabacum HOM05D004839 ORTHO05D006012 4.0e-183 645.6 662 66.5
Lsat_1_v5_gn_5_23161 Lactuca sativa HOM05D004839 ORTHO05D006012 1.2e-182 644.0 644 64.4
Eucgr.K02520 Eucalyptus grandis HOM05D004839 ORTHO05D006012 1.3e-181 640.6 646 65.5
Sabra12G0046900 Salix brachista HOM05D004839 ORTHO05D006012 2.4e-180 636.3 635 64.7
Aqoxy3G03618 Aquilegia oxysepala HOM05D004839 ORTHO05D006012 4.6e-179 632.1 635 68.3
Sc04g0004870 Simmondsia chinensis HOM05D004839 ORTHO05D006012 6.0e-179 631.7 636 62.1
Manes.06G085750 Manihot esculenta HOM05D004839 ORTHO05D006012 1.3e-178 630.6 696 61.2
CiPaw.11G051800 Carya illinoinensis HOM05D004839 ORTHO05D006012 3.9e-178 629.0 642 67.1
Solyc03g115240.4 Solanum lycopersicum HOM05D004839 ORTHO05D006012 4.3e-177 625.5 639 68.4
Prupe.5G203800 Prunus persica HOM05D004839 ORTHO05D006012 1.8e-175 620.2 637 64.8
MBI16_g41829_MAGBIO Magnolia biondii HOM05D004839 ORTHO05D006012 2.6e-174 616.3 557 68.2
CAN.G479.17 Capsicum annuum HOM05D004839 ORTHO05D006012 4.4e-174 615.5 670 66.9
Nitab4.5_0001485g0220 Nicotiana tabacum HOM05D004839 ORTHO05D006012 1.1e-172 610.9 566 68.9
HanXRQChr05g0157271 Helianthus annuus HOM05D004839 ORTHO05D006012 1.9e-172 610.1 657 62.4
Potri.012G065600 Populus trichocarpa HOM05D004839 ORTHO05D006012 1.0e-170 604.4 635 65.2
Sopen03g034280 Solanum pennellii HOM05D004839 ORTHO05D006012 3.0e-170 602.8 521 71.2
AUR62008513 Chenopodium quinoa HOM05D004839 ORTHO05D006012 5.1e-170 602.1 559 63.5
THA.LOC104818342 Tarenaya hassleriana HOM05D004839 ORTHO05D006012 6.6e-170 601.7 641 64.3
MSTRG.22981 Avicennia marina HOM05D004839 ORTHO05D006012 1.9e-169 600.1 636 65.6
GSVIVG01007883001 Vitis vinifera HOM05D004839 ORTHO05D006012 4.3e-169 599.0 633 66.8
Thecc.03G099900 Theobroma cacao HOM05D004839 ORTHO05D006012 1.6e-168 597.0 506 70.4
Oeu001010.1 Olea europaea HOM05D004839 ORTHO05D006012 2.1e-168 596.7 657 56.0
DCAR_023142 Daucus carota HOM05D004839 ORTHO05D006012 1.5e-166 590.5 542 67.0
SGA_v2.0_scaffold114G31924 Striga asiatica HOM05D004839 ORTHO05D006012 1.5e-166 590.5 680 57.9
EL10Ac5g11115 Beta vulgaris HOM05D004839 ORTHO05D006012 2.6e-166 589.7 635 61.1
MD14G1210500 Malus domestica HOM05D004839 ORTHO05D006012 2.2e-165 586.6 634 64.4
arahy.Tifrunner.gnm1.ann1.PN7U9Z Arachis hypogaea HOM05D004839 ORTHO05D006012 1.1e-164 584.3 533 68.5
FvH4_5g14030 Fragaria vesca HOM05D004839 ORTHO05D006012 9.3e-164 581.3 638 60.5
Glyma.04G163400 Glycine max HOM05D004839 ORTHO05D006012 6.0e-163 578.6 530 68.5
arahy.Tifrunner.gnm1.ann1.8FG0EB Arachis hypogaea HOM05D004839 ORTHO05D006012 7.9e-163 578.2 574 65.9
Lj1g0002650 Lotus japonicus HOM05D004839 ORTHO05D006012 1.8e-162 577.0 525 64.8
FAN08G2012 Fragaria x ananassa HOM05D004839 ORTHO05D006012 2.3e-162 576.6 639 60.3
AUR62021577 Chenopodium quinoa HOM05D004839 ORTHO05D006012 3.0e-162 576.2 530 63.6
Ah.11g047930 Amaranthus hybridus HOM05D004839 ORTHO05D006012 2.5e-161 573.2 638 58.6
CDE04G3432 Ceratophyllum demersum HOM05D004839 ORTHO05D006012 2.5e-161 573.2 664 58.7
Hund02595 Selenicereus undatus HOM05D004839 ORTHO05D006012 2.5e-161 573.2 692 60.1
ClCG04G011890 Citrullus lanatus HOM05D004839 ORTHO05D006012 1.3e-160 570.9 644 62.3
Glyma.06G202100 Glycine max HOM05D004839 ORTHO05D006012 4.8e-160 568.9 570 60.2
Actinidia04835 Actinidia chinensis HOM05D004839 ORTHO05D006012 1.1e-159 567.8 395 79.0
Peaxi162Scf00201g10021 Petunia axillaris HOM05D004839 ORTHO05D006012 5.8e-158 562.0 547 67.5
unitig_749.g13436 Utricularia gibba HOM05D004839 ORTHO05D006012 1.4e-156 557.4 540 61.3
TPR.G11937 Trifolium pratense HOM05D004839 ORTHO05D006012 9.3e-156 554.7 640 63.4
MELO3C002019.2 Cucumis melo HOM05D004839 ORTHO05D006012 1.2e-155 554.3 644 61.8
Lalb_Chr07g0184911 Lupinus albus HOM05D004839 ORTHO05D006012 2.1e-155 553.5 653 61.9
MD06G1201400 Malus domestica HOM05D004839 ORTHO05D006012 1.3e-152 544.3 541 65.6
FAN13G1538 Fragaria x ananassa HOM05D004839 ORTHO05D006012 2.4e-151 540.0 637 53.8
RcHm_v2.0_Chr7g0182791 Rosa chinensis HOM05D004839 ORTHO05D006012 4.1e-151 539.3 639 60.6
Ca_02963_v3 Cicer arietinum L. HOM05D004839 ORTHO05D006012 1.3e-149 534.3 493 69.8
Phvul.009G192800 Phaseolus vulgaris HOM05D004839 ORTHO05D006012 2.2e-149 533.5 433 69.1
CsaV3_1G005900 Cucumis sativus L. HOM05D000422 ORTHO05D003570 5.0e-149 532.3 636 59.4
HPP92_018601 Vanilla planifolia HOM05D004839 ORTHO05D006012 5.0e-149 532.3 638 56.0
VMungo1309G1059 Vigna mungo HOM05D004839 ORTHO05D006012 3.2e-148 529.6 643 63.5
vmacro16504 Vaccinium macrocarpon HOM05D004839 ORTHO05D006012 9.3e-148 528.1 698 53.9
Psat0s569g0080 Pisum sativum HOM05D004839 ORTHO05D006012 1.6e-147 527.3 636 62.4
Lalb_Chr13g0296121 Lupinus albus HOM05D004839 ORTHO05D006012 1.8e-146 523.9 451 67.8
Sed0026784 Sechium edule HOM05D004839 ORTHO05D006012 1.8e-146 523.9 514 63.6
PSO478G1197 Papaver somniferum HOM05D004839 ORTHO05D006012 2.5e-145 520.0 559 60.6
PSO017G5800 Papaver somniferum HOM05D004839 ORTHO05D006012 4.3e-145 519.2 559 60.6
Sed0023482 Sechium edule HOM05D004839 ORTHO05D006012 1.8e-143 513.8 644 57.8
Medtr3g024360 Medicago truncatula HOM05D004839 ORTHO05D006012 5.5e-140 502.3 641 60.8
Medtr3g024380 Medicago truncatula HOM05D004839 ORTHO05D006012 7.2e-140 501.9 641 60.2
Aa31LG11G2200 Aethionema arabicum HOM05D004839 ORTHO05D006012 6.3e-136 488.8 669 56.7
Carub.0008s2182 Capsella rubella HOM05D004839 ORTHO05D006012 6.3e-136 488.8 524 62.6
A09p07230 Brassica napus HOM05D004839 ORTHO05D006012 4.5e-134 482.6 644 58.7
Thhalv10003808m.g Eutrema salsugineum HOM05D004839 ORTHO05D006012 1.1e-132 478.0 655 58.2
Zm00001eb298660 Zea mays HOM05D004839 ORTHO05D006012 1.1e-132 478.0 593 54.1
Sp2g24400 Schrenkiella parvula HOM05D004839 ORTHO05D006012 1.0e-130 471.5 652 56.7
GSVIVG01007906001 Vitis vinifera HOM05D004839 ORTHO05D006012 1.0e-130 471.5 373 74.8
AT5G61150 Arabidopsis thaliana HOM05D004839 ORTHO05D006012 1.1e-129 468.0 646 56.2
ATR0064G044 Amborella trichopoda HOM05D004839 ORTHO05D006012 2.2e-128 463.8 353 71.1
Lalb_Chr07g0184901 Lupinus albus HOM05D004839 ORTHO05D006012 8.2e-128 461.8 549 55.6
BcaC04g23462 Brassica carinata HOM05D004839 ORTHO05D006012 9.1e-127 458.4 647 58.1
C09p08080 Brassica napus HOM05D004839 ORTHO05D006012 1.2e-126 458.0 648 58.6
BolC9t53722H Brassica oleracea HOM05D004839 ORTHO05D006012 7.7e-126 455.3 655 57.6
Os12g0579000 Oryza sativa ssp. japonica HOM05D004839 ORTHO05D006012 7.7e-126 455.3 499 56.1
Zm00001eb118140 Zea mays HOM05D004839 ORTHO05D006012 3.0e-122 443.4 603 51.1
BolC2t12188H Brassica oleracea HOM05D004839 ORTHO05D006012 4.0e-122 443.0 529 58.6
AL8G37800 Arabidopsis lyrata HOM05D004839 ORTHO05D006012 8.8e-122 441.8 659 55.1
C02p61390 Brassica napus HOM05D004839 ORTHO05D006012 1.7e-120 437.6 648 56.6
SEGI_03099 Sequoiadendron giganteum HOM05D004839 ORTHO05D006012 2.2e-120 437.2 512 57.8
CARHR274840 Cardamine hirsuta HOM05D004839 ORTHO05D006012 3.5e-118 429.9 643 54.9
COL.COLO4_37593 Corchorus olitorius HOM05D004839 ORTHO05D006012 2.3e-114 417.2 633 45.2
A02p41460 Brassica napus HOM05D004839 ORTHO05D006012 4.8e-112 409.5 647 53.5
BraA09t36373Z Brassica rapa HOM05D004839 ORTHO05D006012 2.2e-109 400.6 536 54.5
Gohir.D13G091100 Gossypium hirsutum HOM05D004839 ORTHO05D006012 3.8e-109 399.8 373 67.8
Gohir.D07G141700 Gossypium hirsutum HOM05D004839 ORTHO05D006012 6.5e-109 399.1 373 67.6
Gohir.D12G082302 Gossypium hirsutum HOM05D004839 ORTHO05D006012 6.5e-109 399.1 373 67.6
Gohir.D12G082100 Gossypium hirsutum HOM05D004839 ORTHO05D006012 8.5e-109 398.7 373 67.8
Nn030s41597 Nelumbo nucifera HOM05D004839 ORTHO05D006012 4.7e-107 392.9 314 76.1
Os07g0109600 Oryza sativa ssp. japonica HOM05D004839 ORTHO05D006012 7.3e-100 369.0 475 54.3
Mapoly0001s0516 Marchantia polymorpha HOM05D004839 ORTHO05D006012 2.8e-91 340.5 342 56.4
Pp3c14_2440 Physcomitrium patens HOM05D004839 ORTHO05D006012 9.8e-89 332.0 364 51.9
Os03g0756500 Oryza sativa ssp. japonica HOM05D004839 ORTHO05D006012 6.4e-88 329.3 351 54.4
MBI05_g39010_MAGBIO Magnolia biondii HOM05D004839 ORTHO05D006012 4.1e-87 326.6 458 51.1
AagrBONN_evm.TU.Sc2ySwM_228.780 Anthoceros agrestis HOM05D004839 ORTHO05D006012 1.7e-85 321.2 279 61.6
SGA_v2.0_scaffold313G48307 Striga asiatica HOM05D004839 ORTHO05D006012 3.9e-77 293.5 480 43.1
MSTRG.22984 Avicennia marina HOM05D004839 ORTHO05D006012 4.4e-73 280.0 401 44.9
Migut.I00327 Erythranthe guttata HOM05D004839 ORTHO05D006012 2.9e-72 277.3 516 41.3
SMO301G0010 Selaginella moellendorffii HOM05D004839 ORTHO05D006012 6.4e-72 276.2 388 47.2
Oeu001821.1 Olea europaea HOM05D004839 ORTHO05D006012 5.4e-63 246.5 290 51.0
MBI05_g05675_MAGBIO Magnolia biondii HOM05D004839 ORTHO05D006012 3.5e-62 243.8 556 38.8
CBR_g54910 Chara braunii HOM05D004839 ORTHO05D000002 4.0e-58 230.3 300 46.7
RhsimUnG0229200 Rhododendron simsii HOM05D004839 ORTHO05D006012 5.4e-55 219.9 272 60.7
Oeu008253.1 Olea europaea HOM05D004839 ORTHO05D006012 5.5e-47 193.4 191 63.4
Gohir.D01G045700 Gossypium hirsutum HOM05D004839 ORTHO05D006012 3.5e-46 190.7 335 50.4
arahy.Tifrunner.gnm1.ann1.YGY8HB Arachis hypogaea HOM05D010000 ORTHO05D006012 1.0e-45 189.1 169 63.3
MD06G1201100 Malus domestica HOM05D004839 ORTHO05D006012 3.0e-45 187.6 141 74.5
Lsat_1_v5_gn_3_57821 Lactuca sativa HOM05D004839 ORTHO05D006012 4.2e-39 167.2 103 78.6
Oeu022173.1 Olea europaea HOM05D004839 ORTHO05D006012 8.5e-32 142.9 284 38.7
MCO04G392 Micromonas commoda HOM05D004839 ORTHO05D006012 6.3e-27 126.7 319 31.3
SalBow5G1942 Salvia bowleyana HOM05D004839 ORTHO05D006012 1.8e-26 125.2 425 32.0
arahy.Tifrunner.gnm1.ann1.WE96GU Arachis hypogaea HOM05D004839 ORTHO05D006012 1.4e-21 109.0 153 51.6
Cre16.g694204 Chlamydomonas reinhardtii HOM05D004839 ORTHO05D006012 3.9e-21 107.5 257 31.1
MD06G1201000 Malus domestica HOM05D004839 ORTHO05D006012 3.1e-18 97.8 61 80.3
Cpa.g.c41089 Carica papaya HOM05D004839 ORTHO05D006012 1.0e-16 92.8 90 56.7
Peaxi162Scf00201g00231 Petunia axillaris HOM05D004839 ORTHO05D006012 2.5e-15 88.2 48 85.4
Cpa.g.c34487 Carica papaya HOM05D004839 ORTHO05D006012 1.6e-14 85.5 150 60.0
MD06G1200900 Malus domestica HOM05D004839 ORTHO05D006012 2.3e-13 81.6 224 48.2
Peaxi162Scf00201g00230 Petunia axillaris HOM05D004839 ORTHO05D006012 1.7e-11 75.5 41 85.4
Gorai.011G032300 Gossypium raimondii HOM05D004839 ORTHO05D006012 4.1e-10 70.9 142 47.9
FAN18G1977 Fragaria x ananassa HOM05D004839 ORTHO05D006012 9.4e-07 59.7 177 49.2
Ca_02964_v3 Cicer arietinum L. HOM05D004839 ORTHO05D006012 4.7e-06 57.4 154 38.3


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