Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g21870 Coffea canephora HOM05D007321 ORTHO05D009244 2.4e-284 981.5 501 100.0
Oeu037200.1 Olea europaea HOM05D007321 ORTHO05D009244 4.6e-190 668.3 487 71.0
Nitab4.5_0007385g0020 Nicotiana tabacum HOM05D007321 ORTHO05D009244 1.0e-189 667.2 468 71.4
Nitab4.5_0002105g0030 Nicotiana tabacum HOM05D007321 ORTHO05D009244 5.6e-188 661.4 460 71.7
Migut.B00640 Erythranthe guttata HOM05D007321 ORTHO05D009244 1.4e-186 656.8 496 68.1
MSTRG.16564 Avicennia marina HOM05D007321 ORTHO05D009244 1.3e-184 650.2 484 70.0
PGSC0003DMG400003660 Solanum tuberosum HOM05D007321 ORTHO05D009244 1.9e-183 646.4 464 70.7
Solyc02g083410.4 Solanum lycopersicum HOM05D007321 ORTHO05D009244 3.5e-182 642.1 450 71.3
Sopen02g028190 Solanum pennellii HOM05D007321 ORTHO05D009244 3.5e-182 642.1 454 71.1
Dinv19324 Davidia involucrata HOM05D007321 ORTHO05D009244 3.9e-181 638.6 473 69.6
Lj5P243T60 Lonicera japonica HOM05D007321 ORTHO05D009244 6.6e-181 637.9 464 71.1
Peaxi162Scf00328g00127 Petunia axillaris HOM05D007321 ORTHO05D009244 6.6e-181 637.9 465 69.0
Actinidia28071 Actinidia chinensis HOM05D007321 ORTHO05D009244 2.1e-179 632.9 475 68.2
Manes.16G135300 Manihot esculenta HOM05D007321 ORTHO05D009244 3.6e-179 632.1 484 67.1
VMungo0251G3312 Vigna mungo HOM05D007321 ORTHO05D009244 1.8e-178 629.8 481 68.0
Glyma.05G120300 Glycine max HOM05D007321 ORTHO05D009244 2.0e-177 626.3 446 70.4
Lsat_1_v5_gn_7_80180 Lactuca sativa HOM05D007321 ORTHO05D009244 2.0e-177 626.3 485 67.8
ECA236G2671 Erigeron canadensis HOM05D007321 ORTHO05D009244 5.8e-177 624.8 486 65.6
Phvul.002G206500 Phaseolus vulgaris HOM05D007321 ORTHO05D009244 5.8e-177 624.8 481 67.4
HanXRQChr11g0337111 Helianthus annuus HOM05D007321 ORTHO05D009244 1.7e-176 623.2 463 68.9
COL.COLO4_20870 Corchorus olitorius HOM05D007321 ORTHO05D009244 4.9e-176 621.7 431 71.2
SGA_v2.0_scaffold332G48942 Striga asiatica HOM05D007321 ORTHO05D009244 1.4e-175 620.2 494 65.0
Eucgr.I02693 Eucalyptus grandis HOM05D007321 ORTHO05D009244 9.3e-175 617.5 431 69.8
Nn1g05198 Nelumbo nucifera HOM05D007321 ORTHO05D009244 9.3e-175 617.5 457 68.7
Potri.001G344800 Populus trichocarpa HOM05D007321 ORTHO05D009244 2.1e-174 616.3 451 68.7
Sabra16G0223900 Salix brachista HOM05D007321 ORTHO05D009244 3.9e-173 612.1 451 68.1
Rhsim05G0110900 Rhododendron simsii HOM05D007321 ORTHO05D009244 5.1e-173 611.7 491 65.8
Medtr4g094295 Medicago truncatula HOM05D007321 ORTHO05D009244 1.1e-172 610.5 446 68.4
CiPaw.05G039000 Carya illinoinensis HOM05D007321 ORTHO05D009244 1.9e-172 609.8 442 69.2
Psat1g188000 Pisum sativum HOM05D007321 ORTHO05D009244 1.6e-171 606.7 442 68.8
QL11p019400 Quercus lobata HOM05D007321 ORTHO05D009244 6.2e-171 604.7 454 67.0
Lj4g0025169 Lotus japonicus HOM05D007321 ORTHO05D009244 1.1e-170 604.0 447 68.2
MD03G1054600 Malus domestica HOM05D007321 ORTHO05D009244 1.8e-170 603.2 466 65.7
Thecc.02G143600 Theobroma cacao HOM05D007321 ORTHO05D009244 5.3e-170 601.7 498 62.9
Atru.chr6.902 Acer truncatum HOM05D007321 ORTHO05D009244 6.9e-170 601.3 492 64.2
Gorai.012G140200 Gossypium raimondii HOM05D007321 ORTHO05D009244 1.5e-169 600.1 464 66.6
TWI59G1034 Tripterygium wilfordii HOM05D007321 ORTHO05D009244 2.0e-169 599.7 471 65.4
Aqoxy6G00494 Aquilegia oxysepala HOM05D007321 ORTHO05D009244 7.6e-169 597.8 471 63.3
SalBow5G3411 Salvia bowleyana HOM05D007321 ORTHO05D009244 1.7e-168 596.7 427 70.5
Duzib052G0820 Durio zibethinus HOM05D007321 ORTHO05D009244 2.2e-168 596.3 498 61.0
Gohir.D04G153300 Gossypium hirsutum HOM05D007321 ORTHO05D009244 2.2e-168 596.3 464 66.4
GSVIVG01029706001 Vitis vinifera HOM05D007321 ORTHO05D009244 2.2e-168 596.3 467 65.3
PGR142G0984 Punica granatum HOM05D007321 ORTHO05D009244 2.9e-168 595.9 468 64.1
FvH4_3g40270 Fragaria vesca HOM05D007321 ORTHO05D009244 4.9e-168 595.1 477 63.3
Gohir.A04G112300 Gossypium hirsutum HOM05D007321 ORTHO05D009244 6.4e-168 594.7 503 62.8
Cfa005577 Carpinus fangiana HOM05D007321 ORTHO05D009244 1.4e-167 593.6 449 66.6
ClCG10G015890 Citrullus lanatus HOM05D007321 ORTHO05D009244 1.4e-167 593.6 442 66.5
FAN25G3421 Fragaria x ananassa HOM05D007321 ORTHO05D009244 2.4e-167 592.8 479 63.5
CANSAT80G1420 Cannabis sativa HOM05D007321 ORTHO05D009244 4.2e-167 592.0 456 67.3
DCAR_021840 Daucus carota HOM05D000446 ORTHO05D000321 7.1e-167 591.3 434 67.7
FAN21G2259 Fragaria x ananassa HOM05D007321 ORTHO05D009244 9.3e-167 590.9 479 63.5
RcHm_v2.0_Chr5g0072531 Rosa chinensis HOM05D007321 ORTHO05D009244 1.6e-166 590.1 479 63.7
FAN11G3563 Fragaria x ananassa HOM05D007321 ORTHO05D009244 3.5e-166 589.0 456 65.1
FAN16G2899 Fragaria x ananassa HOM05D007321 ORTHO05D009244 3.5e-166 589.0 456 65.1
Prupe.6G043200 Prunus persica HOM05D007321 ORTHO05D009244 1.0e-165 587.4 500 62.2
Carub.0003s0867 Capsella rubella HOM05D007321 ORTHO05D009244 2.3e-165 586.3 432 67.1
MELO3C009790.2 Cucumis melo HOM05D007321 ORTHO05D009244 1.1e-164 583.9 468 62.8
CARHR083990 Cardamine hirsuta HOM05D007321 ORTHO05D009244 1.5e-164 583.6 464 63.1
BcaC05g29686 Brassica carinata HOM05D007321 ORTHO05D009244 5.6e-164 581.6 442 66.3
Sed0000618 Sechium edule HOM05D007321 ORTHO05D009244 1.6e-163 580.1 451 65.2
A05p39470 Brassica napus HOM05D007321 ORTHO05D009244 4.8e-163 578.6 444 66.0
Lalb_Chr07g0189441 Lupinus albus HOM05D007321 ORTHO05D009244 6.2e-163 578.2 493 61.3
THA.LOC104826997 Tarenaya hassleriana HOM05D007321 ORTHO05D009244 6.2e-163 578.2 435 67.4
BolC5t34500H Brassica oleracea HOM05D007321 ORTHO05D009244 8.1e-163 577.8 451 64.5
BraA05t22728Z Brassica rapa HOM05D007321 ORTHO05D009244 8.1e-163 577.8 444 65.8
C05p58490 Brassica napus HOM05D007321 ORTHO05D009244 1.8e-162 576.6 451 64.3
Ciclev10004047m.g Citrus clementina HOM05D007321 ORTHO05D009244 1.2e-161 573.9 445 66.1
AL3G20750 Arabidopsis lyrata HOM05D007321 ORTHO05D009244 2.0e-161 573.2 442 65.2
Ah.14g085390 Amaranthus hybridus HOM05D007321 ORTHO05D009244 2.6e-161 572.8 483 60.7
CsaV3_3G040590 Cucumis sativus L. HOM05D007321 ORTHO05D009244 9.9e-161 570.9 436 64.2
AT3G09580 Arabidopsis thaliana HOM05D007321 ORTHO05D009244 1.7e-160 570.1 444 65.3
Sp3g07930 Schrenkiella parvula HOM05D007321 ORTHO05D009244 2.5e-159 566.2 445 63.8
EL10Ac8g19338 Beta vulgaris HOM05D007321 ORTHO05D009244 2.1e-158 563.1 443 64.3
PSO541G5651 Papaver somniferum HOM05D007321 ORTHO05D009244 1.0e-157 560.8 497 59.8
CSS0020188 Camellia sinensis var. sinensis HOM05D007321 ORTHO05D009244 2.5e-156 556.2 493 61.3
Aa31LG3G2030 Aethionema arabicum HOM05D007321 ORTHO05D009244 4.3e-156 555.4 463 61.3
Thhalv10003042m.g Eutrema salsugineum HOM05D007321 ORTHO05D009244 7.4e-156 554.7 443 63.4
PSO675G7953 Papaver somniferum HOM05D007321 ORTHO05D009244 2.4e-154 549.7 478 60.0
Sc14g0002750 Simmondsia chinensis HOM05D007321 ORTHO05D009244 1.5e-153 547.0 461 61.0
MBI05_g36588_MAGBIO Magnolia biondii HOM05D007321 ORTHO05D009244 3.2e-151 539.3 500 59.2
AUR62027387 Chenopodium quinoa HOM05D007321 ORTHO05D009244 3.5e-150 535.8 407 65.4
SEGI_02418 Sequoiadendron giganteum HOM05D007321 ORTHO05D009244 9.7e-148 527.7 481 56.3
ATR0580G200 Amborella trichopoda HOM05D007321 ORTHO05D009244 1.3e-144 517.3 511 55.6
Mapoly0005s0009 Marchantia polymorpha HOM05D007321 ORTHO05D009244 1.7e-139 500.4 444 57.4
Pp3c2_19910 Physcomitrium patens HOM05D007321 ORTHO05D009244 1.4e-138 497.3 482 53.7
CDE06G0306 Ceratophyllum demersum HOM05D007321 ORTHO05D009244 2.4e-138 496.5 429 58.7
Ca_18334_v3 Cicer arietinum L. HOM05D005078 ORTHO05D007574 2.6e-137 493.0 403 63.3
SMO116G0156 Selaginella moellendorffii HOM05D007321 ORTHO05D009244 7.4e-132 474.9 427 56.2
TPR.G10452 Trifolium pratense HOM05D007321 ORTHO05D009244 5.0e-128 462.2 368 62.5
Zm00001eb328010 Zea mays HOM05D007321 ORTHO05D009244 6.1e-126 455.3 443 54.9
AagrBONN_evm.TU.Sc2ySwM_344.1849 Anthoceros agrestis HOM05D007321 ORTHO05D009244 4.2e-119 432.6 430 51.6
Os07g0626800 Oryza sativa ssp. japonica HOM05D007321 ORTHO05D009244 1.0e-117 427.9 404 56.2
Cre12.g560900 Chlamydomonas reinhardtii HOM05D007321 ORTHO05D009244 9.1e-114 414.8 448 49.3
TAR381G1665 Trochodendron aralioides HOM05D007321 ORTHO05D009244 7.5e-108 395.2 338 62.4
MCO04G135 Micromonas commoda HOM05D007321 ORTHO05D009244 1.9e-103 380.6 454 46.0
CBR_g49724 Chara braunii HOM05D007321 ORTHO05D009244 6.1e-102 375.6 451 45.7
CAN.G890.33 Capsicum annuum HOM05D007321 ORTHO05D009244 6.8e-101 372.1 495 45.7
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 1.5e-95 354.4 421 45.1
Cpa.g.sc52.12 Carica papaya HOM05D007321 ORTHO05D009244 8.0e-94 348.6 267 63.7
MBI05_g44827_MAGBIO Magnolia biondii HOM05D007321 ORTHO05D009244 8.9e-77 292.0 301 54.8
unitig_8.g3471 Utricularia gibba HOM05D007321 ORTHO05D009244 6.8e-69 265.8 240 59.6
AagrBONN_evm.TU.Sc2ySwM_344.1850 Anthoceros agrestis HOM05D007321 ORTHO05D009244 1.3e-67 261.5 221 57.5
unitig_8.g3470 Utricularia gibba HOM05D007321 ORTHO05D009244 7.3e-55 219.2 147 66.7
AUR62031301 Chenopodium quinoa HOM05D007321 ORTHO05D009244 5.8e-52 209.5 145 66.9
MBI05_g44826_MAGBIO Magnolia biondii HOM05D007321 ORTHO05D009244 4.5e-36 156.8 117 63.2
HPP92_016846 Vanilla planifolia HOM05D007321 ORTHO05D009244 6.1e-25 119.8 105 59.0
TAR381G1585 Trochodendron aralioides HOM05D007321 ORTHO05D009244 1.3e-22 112.1 86 61.6
Aqoxy7G00909 Aquilegia oxysepala HOM05D002360 ORTHO05D006971 1.6e-09 68.6 490 22.9
Pp3c1_4180 Physcomitrium patens HOM05D007163 ORTHO05D009213 1.6e-09 68.6 128 32.8
Nn3g19797 Nelumbo nucifera HOM05D007321 ORTHO05D009244 3.6e-09 67.4 58 62.1
Lalb_Chr14g0363061 Lupinus albus HOM05D007163 ORTHO05D009213 1.0e-08 65.9 171 29.8
BcaB08g36967 Brassica carinata HOM05D007163 ORTHO05D009213 1.4e-08 65.5 172 27.9
BraA10t44490Z Brassica rapa HOM05D007163 ORTHO05D009213 1.8e-08 65.1 175 26.9
A10p24250 Brassica napus HOM05D007163 ORTHO05D009213 2.3e-08 64.7 172 27.3
CANSAT78G1063 Cannabis sativa HOM05D002360 ORTHO05D006971 2.3e-08 64.7 478 22.0
TAR374G1101 Trochodendron aralioides HOM05D007163 ORTHO05D009213 3.0e-08 64.3 223 27.4
Sp6g29810 Schrenkiella parvula HOM05D007163 ORTHO05D009213 4.0e-08 63.9 172 27.3
Aa31LG11G15010 Aethionema arabicum HOM05D007163 ORTHO05D009213 6.7e-08 63.2 172 27.3
C09p62940 Brassica napus HOM05D007163 ORTHO05D009213 6.7e-08 63.2 172 26.7
BolC9t59131H Brassica oleracea HOM05D007163 ORTHO05D009213 6.7e-08 63.2 172 26.7
AUR62025597 Chenopodium quinoa HOM05D002360 ORTHO05D006971 6.7e-08 63.2 484 22.1
BcaC04g19052 Brassica carinata HOM05D007163 ORTHO05D009213 8.8e-08 62.8 172 26.7
Ca_08364_v3 Cicer arietinum L. HOM05D007163 ORTHO05D009213 8.8e-08 62.8 171 28.1
AT5G14220 Arabidopsis thaliana HOM05D007163 ORTHO05D009213 1.1e-07 62.4 170 27.1
CARHR199120 Cardamine hirsuta HOM05D007163 ORTHO05D009213 1.1e-07 62.4 172 27.3
Psat5g097840 Pisum sativum HOM05D002182 ORTHO05D008382 1.5e-07 62.0 483 21.3
GSVIVG01016650001 Vitis vinifera HOM05D002360 ORTHO05D006971 1.5e-07 62.0 492 22.2
MD04G1023800 Malus domestica HOM05D002360 ORTHO05D006971 2.0e-07 61.6 483 21.7
Nn3g16518 Nelumbo nucifera HOM05D007163 ORTHO05D009213 2.6e-07 61.2 219 25.6
SalBow6G3918 Salvia bowleyana HOM05D002360 ORTHO05D006971 2.6e-07 61.2 478 21.5
Migut.I01145 Erythranthe guttata HOM05D002360 ORTHO05D006971 3.3e-07 60.8 493 21.3
SMO165G0055 Selaginella moellendorffii HOM05D007163 ORTHO05D009213 3.3e-07 60.8 179 27.9
TPR.G38344 Trifolium pratense HOM05D007163 ORTHO05D009213 3.3e-07 60.8 171 26.9
AL6G24890 Arabidopsis lyrata HOM05D007163 ORTHO05D009213 5.7e-07 60.1 172 25.6
AUR62001382 Chenopodium quinoa HOM05D002360 ORTHO05D006971 5.7e-07 60.1 474 21.9
Ah.15g094770 Amaranthus hybridus HOM05D002360 ORTHO05D006971 7.4e-07 59.7 474 22.4
Cc04_g00540 Coffea canephora HOM05D002360 ORTHO05D006971 7.4e-07 59.7 482 20.7
Cc07_g00620 Coffea canephora HOM05D007163 ORTHO05D009213 7.4e-07 59.7 187 27.3
CsaV3_6G001080 Cucumis sativus L. HOM05D007163 ORTHO05D009213 7.4e-07 59.7 136 30.9
Glyma.19G087600 Glycine max HOM05D007163 ORTHO05D009213 7.4e-07 59.7 171 27.5
PSO135G0108 Papaver somniferum HOM05D002360 ORTHO05D006971 7.4e-07 59.7 473 21.8
ATR0006G040 Amborella trichopoda HOM05D002360 ORTHO05D006971 9.7e-07 59.3 485 21.4
AagrBONN_evm.TU.Sc2ySwM_362.138 Anthoceros agrestis HOM05D007163 ORTHO05D009213 9.7e-07 59.3 152 28.9
QL02p071962 Quercus lobata HOM05D007163 ORTHO05D009213 9.7e-07 59.3 171 27.5
Sed0015727 Sechium edule HOM05D007163 ORTHO05D009213 9.7e-07 59.3 171 28.7
Medtr7g031310 Medicago truncatula HOM05D007163 ORTHO05D009213 1.7e-06 58.5 171 26.9
MELO3C008208.2 Cucumis melo HOM05D007163 ORTHO05D009213 2.2e-06 58.2 136 30.1
PSO063G0972 Papaver somniferum HOM05D007163 ORTHO05D009213 2.2e-06 58.2 163 27.6
Phvul.001G095800 Phaseolus vulgaris HOM05D007163 ORTHO05D009213 2.2e-06 58.2 172 29.7
Carub.0006s1242 Capsella rubella HOM05D007163 ORTHO05D009213 2.8e-06 57.8 172 25.6
VMungo1383G0219 Vigna mungo HOM05D007163 ORTHO05D009213 3.7e-06 57.4 171 26.9
Ciclev10014964m.g Citrus clementina HOM05D007163 ORTHO05D009213 4.8e-06 57.0 171 25.7
Lalb_Chr23g0278241 Lupinus albus HOM05D002360 ORTHO05D006971 4.8e-06 57.0 487 21.1
THA.LOC104802380 Tarenaya hassleriana HOM05D007163 ORTHO05D009213 4.8e-06 57.0 170 26.5
Lj1g0003964 Lotus japonicus HOM05D007163 ORTHO05D009213 6.3e-06 56.6 186 24.7
Nn6g31492 Nelumbo nucifera HOM05D002360 ORTHO05D006971 6.3e-06 56.6 486 21.0
Phvul.001G264200 Phaseolus vulgaris HOM05D002360 ORTHO05D006971 6.3e-06 56.6 470 20.9
MD17G1014800 Malus domestica HOM05D007163 ORTHO05D009213 8.2e-06 56.2 170 27.1
Psat3g180200 Pisum sativum HOM05D007163 ORTHO05D009213 8.2e-06 56.2 171 26.9


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