Gene: Carub.0006s1242

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0006s1242
  • Transcript Identifier Carub.0006s1242.2
  • Gene Type Coding gene
  • Location scaffold_6 : 4616491-4620344 : negative

Gene Family Information

  • ID HOM05D007163
  • #Genes/#Species 110/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0006s1242.v1.1
  • pacid 39249954
  • synonym Carubv10000586m.g

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006779
IEA
InterProporphyrin-containing compound biosynthetic process
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G14220

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004729
IEA
InterProoxygen-dependent protoporphyrinogen oxidase activity
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G14220
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G14220
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G14220
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT5G14220

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036188 FAD/NAD(P)-binding domain superfamily
IPR004572 Protoporphyrinogen oxidase
IPR002937 Amine oxidase
Mapman id Description
50.1.3 Enzyme classification.EC_1 oxidoreductases.EC_1.3 oxidoreductase acting on CH-CH group of donor