Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 1.0e-282 976.1 501 100.0
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 6.7e-141 505.0 471 57.7
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 5.7e-132 475.3 461 55.1
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 5.3e-130 468.8 465 54.6
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 9.1e-130 468.0 470 53.2
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 7.2e-127 458.4 486 51.9
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 1.4e-125 454.1 473 53.5
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 4.4e-124 449.1 488 51.2
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 1.1e-122 444.5 462 51.3
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 4.1e-122 442.6 466 51.7
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 1.0e-120 438.0 472 52.8
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 1.1e-119 434.5 456 51.1
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 1.6e-118 430.6 468 50.0
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 1.8e-117 427.2 472 49.6
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 4.5e-113 412.5 478 48.7
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 1.3e-112 411.0 467 48.0
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 2.2e-112 410.2 451 51.2
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 3.8e-112 409.5 467 49.9
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 8.5e-112 408.3 484 49.4
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 1.5e-111 407.5 460 48.5
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 1.4e-109 401.0 465 49.0
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 4.0e-109 399.4 455 48.6
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.2e-109 399.1 455 49.5
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 4.4e-108 396.0 441 49.0
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 7.5e-108 395.2 480 47.1
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.3e-107 394.4 463 47.9
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 2.8e-107 393.3 472 47.7
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 4.8e-107 392.5 467 46.5
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 4.8e-107 392.5 471 46.9
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 6.3e-107 392.1 471 46.3
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 2.4e-106 390.2 450 48.4
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 5.4e-106 389.0 462 46.8
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.2e-105 387.9 455 48.6
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 1.2e-105 387.9 483 46.2
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.0e-105 387.1 463 47.1
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 3.8e-104 382.9 462 45.9
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 7.2e-103 378.6 466 44.8
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.0e-101 373.2 443 48.8
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 4.0e-101 372.9 465 44.3
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 3.4e-100 369.8 463 43.4
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 1.1e-98 364.8 480 45.2
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 1.4e-98 364.4 454 46.7
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 1.6e-97 360.9 447 46.1
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.7e-97 360.1 476 45.0
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 3.5e-97 359.8 466 44.8
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 3.5e-97 359.8 476 45.0
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 4.5e-97 359.4 468 43.8
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 1.3e-96 357.8 469 43.7
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 3.9e-96 356.3 468 43.4
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 1.1e-95 354.8 473 43.8
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 9.5e-95 351.7 464 42.9
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 1.2e-94 351.3 483 41.8
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 1.2e-94 351.3 439 46.0
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 3.6e-94 349.7 415 45.3
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 3.6e-94 349.7 470 44.3
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 4.7e-94 349.4 489 41.9
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.0e-93 348.2 463 41.7
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 2.3e-93 347.1 461 44.3
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 3.1e-93 346.7 468 45.3
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 7.5e-92 342.0 480 43.3
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 3.7e-91 339.7 480 40.6
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 9.2e-90 335.1 463 42.8
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 2.7e-89 333.6 465 42.6
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 7.8e-89 332.0 463 40.6
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 7.8e-89 332.0 414 45.7
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 1.0e-88 331.6 474 42.2
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 1.7e-88 330.9 478 42.5
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 5.0e-88 329.3 453 42.8
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 1.1e-87 328.2 474 41.1
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 7.3e-87 325.5 474 42.0
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 3.6e-86 323.2 474 42.4
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 6.2e-86 322.4 461 42.1
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 8.0e-86 322.0 461 42.5
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 3.1e-85 320.1 461 41.9
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 5.2e-85 319.3 461 42.3
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 6.8e-85 318.9 480 40.2
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 2.6e-84 317.0 464 41.8
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 3.4e-84 316.6 465 42.8
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 3.4e-84 316.6 463 40.2
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 5.8e-84 315.8 461 42.5
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 7.5e-84 315.5 461 41.4
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 2.9e-83 313.5 475 40.8
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 8.3e-83 312.0 438 42.9
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 3.2e-82 310.1 446 42.4
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 9.2e-82 308.5 486 39.9
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 1.7e-80 304.3 459 40.1
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 3.3e-79 300.1 338 49.4
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 1.2e-78 298.1 461 38.8
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 1.6e-78 297.7 461 39.5
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 1.1e-77 295.0 465 40.4
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 2.2e-75 287.3 337 48.4
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 6.6e-72 275.8 355 45.4
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 4.7e-70 269.6 302 48.7
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 2.2e-67 260.8 489 36.2
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 4.2e-66 256.5 462 36.6
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.4e-61 241.5 303 44.6
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 2.0e-60 237.7 326 40.8
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 3.4e-52 210.3 323 41.2
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 1.0e-40 172.2 182 50.5
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 3.7e-38 163.7 365 32.9
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 3.3e-31 140.6 154 46.8
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.5e-26 124.4 132 49.2
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.1e-25 121.3 132 48.5
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.1e-25 121.3 132 48.5
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 6.1e-25 119.8 226 33.6
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 8.8e-24 115.9 212 36.8
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 1.5e-20 105.1 483 24.4
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 2.6e-20 104.4 141 46.1
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 1.3e-19 102.1 420 25.7
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.2e-19 101.3 118 45.8
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 2.9e-19 100.9 79 64.6
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.6e-17 95.1 254 33.5
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.1e-17 94.7 128 45.3
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 3.6e-17 94.0 89 57.3
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 5.1e-16 90.1 159 30.2
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 5.1e-16 90.1 159 30.2
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 5.9e-12 76.6 202 29.7
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 5.0e-11 73.6 117 35.9
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 8.5e-11 72.8 457 22.5
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.3e-08 64.7 108 34.3
arahy.Tifrunner.gnm1.ann1.SUI2IU Arachis hypogaea HOM05D006143 ORTHO05D007587 1.1e-07 62.4 57 50.9
CSS0047646 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D001638 3.3e-07 60.8 68 51.5
Actinidia07619 Actinidia chinensis HOM05D006143 ORTHO05D007587 1.3e-06 58.9 113 34.5


User provided reference genes

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