Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g18040 Coffea canephora HOM05D004007 ORTHO05D005127 6.7e-235 817.0 422 100.0
THA.LOC104820071 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 4.7e-212 741.1 419 89.3
PGSC0003DMG400020149 Solanum tuberosum HOM05D004007 ORTHO05D005127 5.7e-210 734.2 419 89.0
COL.COLO4_34373 Corchorus olitorius HOM05D004007 ORTHO05D005127 7.5e-210 733.8 419 88.3
CANSAT01G1551 Cannabis sativa HOM05D004007 ORTHO05D005127 9.8e-210 733.4 419 89.0
Atru.chr5.1778 Acer truncatum HOM05D004007 ORTHO05D005127 1.3e-209 733.0 419 88.3
Gohir.A07G150500 Gossypium hirsutum HOM05D004007 ORTHO05D005127 1.7e-209 732.6 418 88.0
MELO3C022382.2 Cucumis melo HOM05D004007 ORTHO05D005127 3.7e-209 731.5 419 88.1
Solyc06g083790.3 Solanum lycopersicum HOM05D004007 ORTHO05D005127 3.7e-209 731.5 419 88.8
Sopen06g035200 Solanum pennellii HOM05D004007 ORTHO05D005127 3.7e-209 731.5 419 88.8
ClCG06G001530 Citrullus lanatus HOM05D004007 ORTHO05D005127 8.3e-209 730.3 419 88.3
Gorai.001G179900 Gossypium raimondii HOM05D004007 ORTHO05D005127 8.3e-209 730.3 418 87.8
Lj1A71T65 Lonicera japonica HOM05D004007 ORTHO05D005127 8.3e-209 730.3 420 88.6
GSVIVG01028373001 Vitis vinifera HOM05D004007 ORTHO05D005127 1.4e-208 729.6 420 87.4
Thhalv10001996m.g Eutrema salsugineum HOM05D004007 ORTHO05D005127 1.8e-208 729.2 418 88.5
Peaxi162Scf00415g00213 Petunia axillaris HOM05D004007 ORTHO05D005127 1.8e-208 729.2 427 87.8
DCAR_018503 Daucus carota HOM05D004007 ORTHO05D005127 2.4e-208 728.8 420 86.2
Manes.13G037000 Manihot esculenta HOM05D004007 ORTHO05D005127 2.4e-208 728.8 418 88.5
Actinidia09529 Actinidia chinensis HOM05D004007 ORTHO05D005127 3.1e-208 728.4 419 88.1
Oeu035732.1 Olea europaea HOM05D004007 ORTHO05D005127 3.1e-208 728.4 420 87.9
RcHm_v2.0_Chr6g0287371 Rosa chinensis HOM05D004007 ORTHO05D005127 3.1e-208 728.4 419 89.0
Gohir.D07G157000 Gossypium hirsutum HOM05D004007 ORTHO05D005127 4.1e-208 728.0 418 88.0
Sed0019801 Sechium edule HOM05D004007 ORTHO05D005127 4.1e-208 728.0 419 88.1
QL09p040238 Quercus lobata HOM05D004007 ORTHO05D005127 5.4e-208 727.6 419 87.4
MSTRG.18338 Avicennia marina HOM05D004007 ORTHO05D005127 7.0e-208 727.2 420 87.4
CAN.G771.36 Capsicum annuum HOM05D004007 ORTHO05D005127 7.0e-208 727.2 419 88.1
CsaV3_6G007490 Cucumis sativus L. HOM05D004007 ORTHO05D005127 9.1e-208 726.9 419 87.6
CiPaw.03G267900 Carya illinoinensis HOM05D004007 ORTHO05D005127 1.2e-207 726.5 419 87.4
Duzib138G0603 Durio zibethinus HOM05D004007 ORTHO05D005127 1.2e-207 726.5 418 88.8
Nn3g19723 Nelumbo nucifera HOM05D004007 ORTHO05D005127 1.2e-207 726.5 419 88.3
Nitab4.5_0000917g0090 Nicotiana tabacum HOM05D004007 ORTHO05D005127 2.0e-207 725.7 436 86.0
Aqoxy2G03706 Aquilegia oxysepala HOM05D004007 ORTHO05D005127 2.7e-207 725.3 418 87.3
Gohir.D07G156900 Gossypium hirsutum HOM05D004007 ORTHO05D005127 2.7e-207 725.3 427 86.7
Potri.014G195700 Populus trichocarpa HOM05D004007 ORTHO05D005127 2.7e-207 725.3 419 87.6
Gohir.A07G150600 Gossypium hirsutum HOM05D004007 ORTHO05D005127 3.5e-207 724.9 418 87.3
Hma1.2p1_0273F.1_g109400 Hydrangea macrophylla HOM05D004007 ORTHO05D005127 3.5e-207 724.9 419 87.8
TWI18G0319 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 3.5e-207 724.9 418 87.6
Thecc.01G253900 Theobroma cacao HOM05D004007 ORTHO05D005127 4.5e-207 724.5 418 87.8
arahy.Tifrunner.gnm1.ann1.ZVPG3A Arachis hypogaea HOM05D004007 ORTHO05D005127 7.7e-207 723.8 422 88.2
Potri.002G259600 Populus trichocarpa HOM05D004007 ORTHO05D005127 7.7e-207 723.8 419 88.1
Carub.0003s3481 Capsella rubella HOM05D004007 ORTHO05D005127 1.0e-206 723.4 418 87.8
Duzib211G0126 Durio zibethinus HOM05D004007 ORTHO05D005127 1.0e-206 723.4 418 87.1
SGA_v2.0_scaffold138G35202 Striga asiatica HOM05D004007 ORTHO05D005127 1.3e-206 723.0 419 87.1
Ciclev10020300m.g Citrus clementina HOM05D004007 ORTHO05D005127 1.7e-206 722.6 419 87.6
FvH4_2g20990 Fragaria vesca HOM05D004007 ORTHO05D005127 1.7e-206 722.6 419 88.1
AL3G53400 Arabidopsis lyrata HOM05D004007 ORTHO05D005127 2.3e-206 722.2 418 87.8
BcaB03g16833 Brassica carinata HOM05D004007 ORTHO05D005127 2.3e-206 722.2 418 88.0
CiPaw.04G188500 Carya illinoinensis HOM05D004007 ORTHO05D005127 2.3e-206 722.2 419 87.1
Gorai.001G180000 Gossypium raimondii HOM05D004007 ORTHO05D005127 2.3e-206 722.2 418 87.6
Sp3g33640 Schrenkiella parvula HOM05D004007 ORTHO05D005127 2.3e-206 722.2 418 87.6
Os02g0621700 Oryza sativa ssp. japonica HOM05D004007 ORTHO05D005127 2.9e-206 721.8 420 87.4
Peaxi162Scf00013g01239 Petunia axillaris HOM05D004007 ORTHO05D005127 2.9e-206 721.8 420 88.6
TWI12G1332 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 2.9e-206 721.8 418 86.6
BcaB07g31587 Brassica carinata HOM05D004007 ORTHO05D005127 5.0e-206 721.1 418 87.8
Sabra14G0145900 Salix brachista HOM05D004007 ORTHO05D005127 6.5e-206 720.7 419 86.9
TAR636G3081 Trochodendron aralioides HOM05D004007 ORTHO05D005127 6.5e-206 720.7 419 86.9
FAN15G2391 Fragaria x ananassa HOM05D004007 ORTHO05D005127 1.1e-205 719.9 419 87.4
AT2G20420 Arabidopsis thaliana HOM05D004007 ORTHO05D005127 1.5e-205 719.5 418 87.1
A09p13930 Brassica napus HOM05D004007 ORTHO05D005127 1.5e-205 719.5 418 87.8
Migut.N02218 Erythranthe guttata HOM05D004007 ORTHO05D005127 1.9e-205 719.2 420 86.0
C09p16710 Brassica napus HOM05D004007 ORTHO05D005127 3.2e-205 718.4 418 87.6
BolC9t54570H Brassica oleracea HOM05D004007 ORTHO05D005127 3.2e-205 718.4 418 87.6
BraA09t37039Z Brassica rapa HOM05D004007 ORTHO05D005127 3.2e-205 718.4 418 87.6
PGR031G0590 Punica granatum HOM05D004007 ORTHO05D005127 3.2e-205 718.4 420 87.4
Migut.D00454 Erythranthe guttata HOM05D004007 ORTHO05D005127 5.5e-205 717.6 420 86.9
Glyma.13G125400 Glycine max HOM05D004007 ORTHO05D005127 5.5e-205 717.6 419 87.1
Aa31LG8G17390 Aethionema arabicum HOM05D004007 ORTHO05D005127 7.2e-205 717.2 418 87.3
MD05G1193100 Malus domestica HOM05D004007 ORTHO05D005127 7.2e-205 717.2 421 86.9
Glyma.10G039000 Glycine max HOM05D004007 ORTHO05D005127 9.5e-205 716.8 419 87.1
Manes.12G034800 Manihot esculenta HOM05D004007 ORTHO05D005127 9.5e-205 716.8 418 86.8
Prupe.8G219400 Prunus persica HOM05D004007 ORTHO05D005127 9.5e-205 716.8 421 86.5
unitig_22.g5450 Utricularia gibba HOM05D004007 ORTHO05D005127 9.5e-205 716.8 419 86.6
MSTRG.21476 Avicennia marina HOM05D004007 ORTHO05D005127 1.2e-204 716.5 420 86.2
BcaC04g22683 Brassica carinata HOM05D004007 ORTHO05D005127 1.6e-204 716.1 418 87.3
BcaB08g34906 Brassica carinata HOM05D004007 ORTHO05D005127 2.1e-204 715.7 416 87.5
Phvul.007G190800 Phaseolus vulgaris HOM05D004007 ORTHO05D005127 2.1e-204 715.7 419 86.6
Lalb_Chr06g0170611 Lupinus albus HOM05D004007 ORTHO05D005127 2.8e-204 715.3 422 86.0
Psat6g062440 Pisum sativum HOM05D004007 ORTHO05D005127 2.8e-204 715.3 422 86.5
vmacro02694 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 2.8e-204 715.3 419 86.9
THA.LOC104804042 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 4.7e-204 714.5 420 86.0
Zm00001eb247500 Zea mays HOM05D004007 ORTHO05D005127 4.7e-204 714.5 420 86.4
C07p00650 Brassica napus HOM05D004007 ORTHO05D005127 6.1e-204 714.1 418 86.8
BraA07t27822Z Brassica rapa HOM05D004007 ORTHO05D005127 8.0e-204 713.8 418 87.1
MD10G1179600 Malus domestica HOM05D004007 ORTHO05D005127 8.0e-204 713.8 421 86.7
VMungo0720G0501 Vigna mungo HOM05D004007 ORTHO05D005127 1.0e-203 713.4 419 86.2
BcaC06g36729 Brassica carinata HOM05D004007 ORTHO05D005127 1.4e-203 713.0 418 86.8
BolC7t40509H Brassica oleracea HOM05D004007 ORTHO05D005127 1.4e-203 713.0 418 86.8
Lj5g0009759 Lotus japonicus HOM05D004007 ORTHO05D005127 1.4e-203 713.0 419 87.4
FAN24G2352 Fragaria x ananassa HOM05D004007 ORTHO05D005127 1.8e-203 712.6 434 85.0
HPP92_008549 Vanilla planifolia HOM05D004007 ORTHO05D005127 1.8e-203 712.6 418 85.6
A07p00310 Brassica napus HOM05D004007 ORTHO05D005127 3.0e-203 711.8 418 86.8
Ca_09660_v3 Cicer arietinum L. HOM05D004007 ORTHO05D005127 4.0e-203 711.4 422 86.3
Zm00001eb185030 Zea mays HOM05D004007 ORTHO05D005127 4.0e-203 711.4 420 86.0
HanXRQChr04g0111281 Helianthus annuus HOM05D004007 ORTHO05D005127 1.2e-202 709.9 421 86.0
Lsat_1_v5_gn_8_92300 Lactuca sativa HOM05D004007 ORTHO05D005127 1.2e-202 709.9 419 86.4
Hund04389 Selenicereus undatus HOM05D004007 ORTHO05D005127 1.2e-202 709.9 419 85.2
Lalb_Chr02g0152651 Lupinus albus HOM05D004007 ORTHO05D005127 1.5e-202 709.5 422 85.5
PSO832G3765 Papaver somniferum HOM05D004007 ORTHO05D005127 1.5e-202 709.5 419 86.4
SalBow6G2566 Salvia bowleyana HOM05D004007 ORTHO05D005127 1.5e-202 709.5 419 85.2
Medtr1g069645 Medicago truncatula HOM05D004007 ORTHO05D005127 3.4e-202 708.4 422 85.5
PSO210G2341 Papaver somniferum HOM05D004007 ORTHO05D005127 7.5e-202 707.2 419 86.2
FAN27G2583 Fragaria x ananassa HOM05D004007 ORTHO05D005127 9.8e-202 706.8 428 86.0
HanXRQChr10g0280751 Helianthus annuus HOM05D004007 ORTHO05D005127 2.2e-201 705.7 421 85.3
TPR.G5690 Trifolium pratense HOM05D004007 ORTHO05D005127 3.7e-201 704.9 422 85.5
CDE05G0056 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 4.9e-201 704.5 419 84.5
Sabra02G0197500 Salix brachista HOM05D004007 ORTHO05D005127 4.9e-201 704.5 450 81.1
Haze_24666 Corylus avellana HOM05D004007 ORTHO05D005127 1.4e-200 703.0 474 77.6
Haze_24671 Corylus avellana HOM05D004007 ORTHO05D005127 1.4e-200 703.0 474 77.6
CSS0014309 Camellia sinensis var. sinensis HOM05D004007 ORTHO05D005127 1.8e-200 702.6 419 85.9
Rhsim01G0261700 Rhododendron simsii HOM05D004007 ORTHO05D005127 3.1e-200 701.8 438 83.1
Eucgr.H00143 Eucalyptus grandis HOM05D004007 ORTHO05D005127 2.7e-199 698.7 420 85.2
EL10Ac6g15333 Beta vulgaris HOM05D004007 ORTHO05D005127 3.5e-199 698.4 419 84.2
Rhsim13G0038000 Rhododendron simsii HOM05D004007 ORTHO05D005127 4.5e-199 698.0 448 81.2
CDE02G1941 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 5.0e-198 694.5 420 84.0
AUR62017860 Chenopodium quinoa HOM05D004007 ORTHO05D005127 4.3e-197 691.4 421 83.6
Lsat_1_v5_gn_9_10741 Lactuca sativa HOM05D004007 ORTHO05D005127 6.8e-195 684.1 421 83.8
Nitab4.5_0003295g0070 Nicotiana tabacum HOM05D004007 ORTHO05D005127 8.9e-195 683.7 410 85.6
SalBow4G2771 Salvia bowleyana HOM05D004007 ORTHO05D005127 6.4e-193 677.6 420 82.9
arahy.Tifrunner.gnm1.ann1.TE5CG8 Arachis hypogaea HOM05D004007 ORTHO05D005127 5.4e-192 674.5 505 73.5
SEGI_32315 Sequoiadendron giganteum HOM05D004007 ORTHO05D005127 7.0e-192 674.1 424 80.7
Nitab4.5_0001919g0010 Nicotiana tabacum HOM05D004007 ORTHO05D005127 7.8e-191 670.6 419 83.5
FAN20G1240 Fragaria x ananassa HOM05D004007 ORTHO05D005127 3.0e-190 668.7 469 77.8
CARHR110970 Cardamine hirsuta HOM05D004007 ORTHO05D005127 3.9e-190 668.3 386 87.8
Dinv16374 Davidia involucrata HOM05D004007 ORTHO05D005127 2.0e-186 656.0 374 87.7
AUR62003546 Chenopodium quinoa HOM05D004007 ORTHO05D005127 7.8e-183 644.0 385 84.2
ATR0736G150 Amborella trichopoda HOM05D004007 ORTHO05D005127 3.3e-181 638.6 373 86.3
MBI07_g32831_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 3.3e-181 638.6 417 80.1
Mapoly0005s0186 Marchantia polymorpha HOM05D004007 ORTHO05D005127 1.8e-179 632.9 437 74.6
SMO201G0240 Selaginella moellendorffii HOM05D004007 ORTHO05D005127 1.8e-179 632.9 403 79.4
Sc16g0004880 Simmondsia chinensis HOM05D004007 ORTHO05D005127 2.3e-179 632.5 378 82.5
Nn1g02862 Nelumbo nucifera HOM05D004007 ORTHO05D005127 2.0e-178 629.4 363 87.3
Oeu055792.1 Olea europaea HOM05D004007 ORTHO05D005127 1.4e-171 606.7 420 76.2
Pp3c20_5640 Physcomitrium patens HOM05D004007 ORTHO05D005127 3.1e-171 605.5 417 74.1
CBR_g26489 Chara braunii HOM05D004007 ORTHO05D005127 1.7e-166 589.7 402 72.4
MBI10_g27626_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 2.1e-164 582.8 408 75.5
Dinv34652 Davidia involucrata HOM05D004007 ORTHO05D005127 5.8e-162 574.7 334 85.6
Actinidia25803 Actinidia chinensis HOM05D004007 ORTHO05D005127 8.1e-156 554.3 309 90.9
Cre17.g703700 Chlamydomonas reinhardtii HOM05D004007 ORTHO05D005127 4.5e-146 521.9 418 63.6
PRCOL_00006943 Prasinoderma coloniale HOM05D004007 ORTHO05D005127 3.8e-145 518.8 394 65.2
MCO01G516 Micromonas commoda HOM05D004007 ORTHO05D005127 1.8e-142 510.0 396 65.7
vmacro14809 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 1.8e-134 483.4 458 60.9
ECA236G0129 Erigeron canadensis HOM05D004007 ORTHO05D005127 5.1e-134 481.9 279 88.9
MBI07_g31081_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 8.2e-132 474.6 282 82.6
QL09p040223 Quercus lobata HOM05D004007 ORTHO05D005127 5.0e-129 465.3 392 66.8
Ah.03g147720 Amaranthus hybridus HOM05D004007 ORTHO05D005127 1.4e-123 447.2 260 86.5
MBI10_g13790_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 1.1e-115 421.0 239 89.1
Cpa.g.sc165.35 Carica papaya HOM05D004007 ORTHO05D005127 2.2e-108 396.7 236 82.2
TAR365G0842 Trochodendron aralioides HOM05D004007 ORTHO05D005127 7.2e-104 381.7 225 84.0
MBI10_g27857_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 2.7e-98 363.2 244 75.0
Lalb_Chr21g0314021 Lupinus albus HOM05D004007 ORTHO05D005127 7.2e-96 355.1 205 87.8
Sed0026875 Sechium edule HOM05D004007 ORTHO05D005127 3.6e-87 326.2 288 63.2
Haze_27401 Corylus avellana HOM05D004007 ORTHO05D005127 5.6e-72 275.8 293 50.5
Psat3g074720 Pisum sativum HOM05D004007 ORTHO05D005127 4.4e-69 266.2 207 68.6
Psat7g041920 Pisum sativum HOM05D004007 ORTHO05D005127 2.5e-64 250.4 147 84.4
Haze_26747 Corylus avellana HOM05D004007 ORTHO05D005127 3.5e-58 229.9 192 58.3
Zm00001eb277730 Zea mays HOM05D004007 ORTHO05D005127 4.9e-52 209.5 134 75.4
Actinidia30141 Actinidia chinensis HOM05D004007 ORTHO05D002753 4.3e-48 196.4 194 61.3
TAR365G0472 Trochodendron aralioides HOM05D004007 ORTHO05D022233 6.4e-44 182.6 101 96.0
Zm00001eb283930 Zea mays HOM05D004007 ORTHO05D005127 6.0e-42 176.0 130 65.4
Aqoxy7G03385 Aquilegia oxysepala HOM05D004007 ORTHO05D005127 1.1e-40 171.8 150 64.7
Cfa021785 Carpinus fangiana HOM05D001982 ORTHO05D003938 3.4e-37 160.2 446 30.3
Dinv08643 Davidia involucrata HOM05D004007 ORTHO05D005127 4.9e-36 156.4 109 73.4
Lj2C1145T6 Lonicera japonica HOM05D004007 ORTHO05D022233 2.7e-34 150.6 157 58.6
Lj2C1146T3 Lonicera japonica HOM05D004007 ORTHO05D022233 3.5e-34 150.2 157 58.0
Haze_26746 Corylus avellana HOM05D004007 ORTHO05D005127 8.4e-28 129.0 178 39.3
CSS0040446 Camellia sinensis var. sinensis HOM05D004007 ORTHO05D005127 2.5e-27 127.5 82 74.4
Lj2A1145G31 Lonicera japonica HOM05D004007 ORTHO05D005127 1.1e-22 112.1 129 50.4
CiPaw.03G130300 Carya illinoinensis HOM05D004007 ORTHO05D005127 8.4e-20 102.4 68 70.6
HanXRQChr10g0293611 Helianthus annuus HOM05D004007 ORTHO05D219627 2.2e-15 87.8 100 52.0
Cpa.g.sc165.34 Carica papaya HOM05D004007 ORTHO05D022233 6.9e-14 82.8 47 93.6
FvH4_2g21030 Fragaria vesca HOM05D004007 ORTHO05D022233 6.9e-14 82.8 49 87.8
Haze_26311 Corylus avellana HOM05D002944 ORTHO05D003377 3.8e-12 77.0 388 28.1
Lalb_Chr21g0314011 Lupinus albus HOM05D004007 ORTHO05D022233 1.9e-11 74.7 40 95.0
EL10Ac1g01458 Beta vulgaris HOM05D006505 ORTHO05D008086 2.7e-10 70.9 113 38.9
EL10Ac7g17956 Beta vulgaris HOM05D006505 ORTHO05D008086 6.1e-10 69.7 111 38.7
Glyma.18G157500 Glycine max HOM05D004007 ORTHO05D005127 6.1e-10 69.7 37 89.2
TAR636G1356 Trochodendron aralioides HOM05D002574 ORTHO05D002797 5.1e-09 66.6 60 56.7
arahy.Tifrunner.gnm1.ann1.SHHZ9W Arachis hypogaea HOM05D002061 ORTHO05D002849 3.3e-08 63.9 417 23.7
HanXRQChr15g0475161 Helianthus annuus HOM05D004007 ORTHO05D222506 1.8e-06 58.2 34 82.4
Cfa022239 Carpinus fangiana HOM05D002061 ORTHO05D121718 5.3e-06 56.6 320 23.4
Cre05.g241850 Chlamydomonas reinhardtii HOM05D002061 ORTHO05D002849 5.3e-06 56.6 369 23.6


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