Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s2590 Capsella rubella HOM05D000042 ORTHO05D003657 2.1e-25 118.2 59 100.0
Carub.0002s2396 Capsella rubella HOM05D000042 ORTHO05D003657 2.5e-15 84.7 60 76.7
AT5G65050 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 4.3e-15 84.0 59 76.3
AL233U10010 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 5.7e-15 83.6 61 75.4
AL2G37250 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 5.3e-13 77.0 59 69.5
Sp2g28130 Schrenkiella parvula HOM05D000042 ORTHO05D003657 1.0e-11 72.8 58 69.0
Thhalv10004949m.g Eutrema salsugineum HOM05D000042 ORTHO05D003657 5.0e-11 70.5 62 64.5
C02p63760 Brassica napus HOM05D000042 ORTHO05D003657 1.4e-10 68.9 62 64.5
Sp2g28150 Schrenkiella parvula HOM05D000042 ORTHO05D003657 1.2e-09 65.9 61 65.6
BolC2t12443H Brassica oleracea HOM05D000042 ORTHO05D003657 2.7e-09 64.7 59 62.7
CARHR278980 Cardamine hirsuta HOM05D000042 ORTHO05D003657 3.6e-09 64.3 63 58.7
Carub.0008s2592 Capsella rubella HOM05D000042 ORTHO05D003657 1.0e-08 62.8 60 61.7
Carub.0008s2591 Capsella rubella HOM05D000042 ORTHO05D003657 2.3e-08 61.6 60 60.0
CARHR278990 Cardamine hirsuta HOM05D000042 ORTHO05D003657 2.3e-08 61.6 60 60.0
AL8G42580 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 1.1e-07 59.3 62 59.7
BcaC03g18301 Brassica carinata HOM05D000042 ORTHO05D003657 1.1e-07 59.3 62 59.7
C02p63770 Brassica napus HOM05D000042 ORTHO05D003657 1.1e-07 59.3 62 59.7
AT5G65070 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 4.4e-07 57.4 63 55.6
A02p43670 Brassica napus HOM05D000042 ORTHO05D003657 4.4e-07 57.4 62 56.5
BraA02t09291Z Brassica rapa HOM05D000042 ORTHO05D003657 4.4e-07 57.4 62 56.5
BraA06t26122Z Brassica rapa HOM05D000042 ORTHO05D003657 4.4e-07 57.4 63 57.1
BcaC03g18294 Brassica carinata HOM05D000042 ORTHO05D003657 5.7e-07 57.0 59 64.4
C02p63700 Brassica napus HOM05D000042 ORTHO05D003657 5.7e-07 57.0 59 64.4
C02p63750 Brassica napus HOM05D000042 ORTHO05D003657 5.7e-07 57.0 59 64.4
BolC2t12438H Brassica oleracea HOM05D000042 ORTHO05D003657 5.7e-07 57.0 59 64.4
BcaC01g02737 Brassica carinata HOM05D000042 ORTHO05D003657 7.4e-07 56.6 62 53.2
A06p31880 Brassica napus HOM05D000042 ORTHO05D003657 7.4e-07 56.6 62 53.2
BolC3t18370H Brassica oleracea HOM05D010344 ORTHO05D012631 7.4e-07 56.6 62 53.2
BraA02t09289Z Brassica rapa HOM05D000042 ORTHO05D003657 9.7e-07 56.2 60 60.0
BcaB07g29773 Brassica carinata HOM05D000042 ORTHO05D003657 1.3e-06 55.8 62 54.8
C03p61060 Brassica napus HOM05D000042 ORTHO05D003657 1.3e-06 55.8 63 55.6
BolC3t18368H Brassica oleracea HOM05D000042 ORTHO05D003657 1.3e-06 55.8 63 55.6
BcaB07g29771 Brassica carinata HOM05D000042 ORTHO05D003657 4.8e-06 53.9 59 61.0
A06p31890 Brassica napus HOM05D000042 ORTHO05D003657 8.2e-06 53.1 58 56.9


User provided reference genes

Program Settings