Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0750 Capsella rubella HOM05D009529 ORTHO05D011424 4.4e-18 97.8 80 100.0
Carub.0005s0710 Capsella rubella HOM05D009529 ORTHO05D011424 2.8e-12 78.6 40 95.0
Carub.0008s0922 Capsella rubella HOM05D009529 ORTHO05D011424 1.8e-11 75.9 42 90.5
AL5G35670 Arabidopsis lyrata HOM05D009529 ORTHO05D011424 9.9e-10 70.1 40 90.0
AT3G54590 Arabidopsis thaliana HOM05D009529 ORTHO05D011424 2.2e-09 68.9 40 87.5
CARHR164480 Cardamine hirsuta HOM05D009529 ORTHO05D011424 4.9e-09 67.8 43 83.7
AL5G35660 Arabidopsis lyrata HOM05D009529 ORTHO05D011424 1.4e-08 66.2 40 85.0
AL5G18170 Arabidopsis lyrata HOM05D009529 ORTHO05D011424 4.1e-08 64.7 40 80.0
AL5G18190 Arabidopsis lyrata HOM05D009529 ORTHO05D011424 4.1e-08 64.7 40 80.0
AT3G54580 Arabidopsis thaliana HOM05D009529 ORTHO05D011424 4.1e-08 64.7 40 80.0
AT3G28550 Arabidopsis thaliana HOM05D009529 ORTHO05D011424 3.5e-07 61.6 80 48.8
AT1G23720 Arabidopsis thaliana HOM05D009529 ORTHO05D011424 1.3e-06 59.7 42 78.6
BcaC02g09059 Brassica carinata HOM05D009529 ORTHO05D011424 1.3e-06 59.7 40 80.0
BolC8t50585H Brassica oleracea HOM05D009529 ORTHO05D011424 1.7e-06 59.3 83 51.8
BraA08t34734Z Brassica rapa HOM05D009529 ORTHO05D011424 2.3e-06 58.9 44 72.7
AL1G37470 Arabidopsis lyrata HOM05D009529 ORTHO05D011424 3.0e-06 58.5 42 76.2
C05p22920 Brassica napus HOM05D009529 ORTHO05D011424 3.9e-06 58.2 42 73.8
C05p22930 Brassica napus HOM05D009529 ORTHO05D011424 3.9e-06 58.2 42 73.8


User provided reference genes

Program Settings