Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_31247_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 3.2e-41 171.4 92 100.0
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 1.0e-31 139.8 91 83.5
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 5.2e-31 137.5 91 81.3
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 5.2e-31 137.5 91 80.2
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 5.2e-31 137.5 91 82.4
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 6.7e-31 137.1 91 80.2
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 8.8e-31 136.7 90 81.1
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 1.5e-30 136.0 91 81.3
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 3.3e-30 134.8 91 79.1
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 3.3e-30 134.8 91 79.1
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 4.4e-30 134.4 90 81.1
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 9.7e-30 133.3 91 78.0
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 1.3e-29 132.9 91 79.1
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 1.7e-29 132.5 91 80.2
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 2.8e-29 131.7 91 78.0
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 2.8e-29 131.7 91 76.9
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 2.8e-29 131.7 91 78.0
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 3.7e-29 131.3 91 78.0
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 3.7e-29 131.3 91 76.9
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 3.7e-29 131.3 91 78.0
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 3.7e-29 131.3 91 78.0
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 4.8e-29 131.0 91 76.9
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 8.2e-29 130.2 91 78.0
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.1e-28 129.8 91 76.9
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 1.4e-28 129.4 90 76.7
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 1.4e-28 129.4 90 76.7
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 1.4e-28 129.4 91 75.8
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.4e-28 129.4 91 75.8
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 1.8e-28 129.0 91 78.0
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 3.1e-28 128.3 91 74.7
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 3.1e-28 128.3 91 74.7
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 3.1e-28 128.3 91 74.7
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 3.1e-28 128.3 91 76.9
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 5.3e-28 127.5 91 75.8
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 9.1e-28 126.7 91 74.7
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 1.2e-27 126.3 91 73.6
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 1.2e-27 126.3 91 76.9
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.2e-27 126.3 91 74.7
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 2.0e-27 125.6 91 74.7
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 2.7e-27 125.2 81 84.0
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 3.5e-27 124.8 91 74.7
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 4.5e-27 124.4 91 74.7
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 5.9e-27 124.0 91 74.7
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 7.7e-27 123.6 94 73.4
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 7.7e-27 123.6 94 73.4
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 1.3e-26 122.9 81 80.2
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 1.3e-26 122.9 81 80.2
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 1.7e-26 122.5 91 73.6
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.7e-26 122.5 91 71.4
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 2.2e-26 122.1 91 74.7
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 3.8e-26 121.3 91 72.5
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 6.5e-26 120.6 90 73.3
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 1.9e-25 119.0 75 88.0
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 2.5e-25 118.6 91 74.7
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 4.2e-25 117.9 76 85.5
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 5.5e-25 117.5 91 73.6
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 7.2e-25 117.1 77 81.8
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 1.2e-24 116.3 75 85.3
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 1.6e-24 115.9 81 76.5
TPR.G19044 Trifolium pratense HOM05D003521 ORTHO05D000476 1.6e-24 115.9 77 83.1
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 2.1e-24 115.5 79 77.2
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 2.7e-24 115.2 76 82.9
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 2.7e-24 115.2 76 82.9
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 2.7e-24 115.2 75 84.0
Ca_25389_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 6.1e-24 114.0 85 75.3
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 8.0e-24 113.6 74 81.1
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 1.0e-23 113.2 76 82.9
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 1.4e-23 112.8 75 82.7
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 1.8e-23 112.5 81 77.8
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 1.8e-23 112.5 81 77.8
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 2.3e-23 112.1 75 81.3
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 3.0e-23 111.7 76 81.6
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 3.0e-23 111.7 76 81.6
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 6.8e-23 110.5 91 69.2
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 6.8e-23 110.5 76 80.3
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 6.8e-23 110.5 91 65.9
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 8.8e-23 110.2 76 78.9
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 8.8e-23 110.2 75 81.3
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 8.8e-23 110.2 73 83.6
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 1.2e-22 109.8 75 80.0
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 1.2e-22 109.8 76 80.3
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 1.2e-22 109.8 75 81.3
TPR.G5155 Trifolium pratense HOM05D003521 ORTHO05D000476 1.2e-22 109.8 71 87.3
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 1.5e-22 109.4 76 80.3
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 2.0e-22 109.0 76 78.9
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 2.0e-22 109.0 91 69.2
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 2.6e-22 108.6 76 78.9
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 4.4e-22 107.8 75 78.7
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 5.7e-22 107.5 76 78.9
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 7.5e-22 107.1 77 76.6
Zm00001eb343520 Zea mays HOM05D003521 ORTHO05D000476 7.5e-22 107.1 91 64.8
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 9.8e-22 106.7 75 80.0
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 9.8e-22 106.7 75 77.3
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 1.3e-21 106.3 76 77.6
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 1.7e-21 105.9 91 64.8
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 3.7e-21 104.8 75 77.3
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 3.7e-21 104.8 77 70.1
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 4.8e-21 104.4 75 74.7
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 4.8e-21 104.4 75 77.3
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 6.3e-21 104.0 75 77.3
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 1.1e-20 103.2 91 60.4
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 2.4e-20 102.1 73 78.1
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 2.4e-20 102.1 73 78.1
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 3.1e-20 101.7 66 84.8
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 5.4e-20 100.9 73 75.3
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 9.1e-20 100.1 81 71.6
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 1.6e-19 99.4 65 84.6
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 3.5e-19 98.2 75 73.3
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 3.5e-19 98.2 76 73.7
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 3.5e-19 98.2 78 67.9
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 5.9e-19 97.4 65 81.5
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 1.0e-18 96.7 91 56.0
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 1.0e-18 96.7 77 67.5
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.7e-18 95.9 61 85.2
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.7e-18 95.9 61 85.2
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 1.7e-18 95.9 61 85.2
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 5.0e-18 94.4 60 85.0
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 5.0e-18 94.4 60 85.0
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 5.0e-18 94.4 60 85.0
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 3.2e-17 91.7 91 56.0
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 4.2e-17 91.3 103 55.3
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 4.7e-16 87.8 80 63.8
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 4.7e-16 87.8 55 87.3
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 3.0e-15 85.1 55 83.6
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 5.2e-15 84.3 103 48.5
HanXRQChr11g0325911 Helianthus annuus HOM05D003521 ORTHO05D000476 3.4e-14 81.6 71 66.2
unitig_46.g18558 Utricularia gibba HOM05D003521 ORTHO05D000476 5.7e-14 80.9 72 62.5
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 1.3e-13 79.7 91 47.3
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 4.9e-13 77.8 49 83.7
PSO596G0006 Papaver somniferum HOM05D003521 ORTHO05D000476 1.8e-12 75.9 70 62.9
PSO596G0043 Papaver somniferum HOM05D003521 ORTHO05D000476 1.8e-12 75.9 70 62.9
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 3.5e-11 71.6 91 50.5
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 5.0e-10 67.8 93 48.4
SMO298G0028 Selaginella moellendorffii HOM05D003521 ORTHO05D000476 1.1e-09 66.6 57 63.2
Cre03.g187000 Chlamydomonas reinhardtii HOM05D003521 ORTHO05D000476 4.3e-09 64.7 84 44.0
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 2.8e-08 62.0 77 49.4
CAN.G395.28 Capsicum annuum HOM05D003521 ORTHO05D000476 1.8e-07 59.3 35 85.7
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 3.0e-07 58.5 54 59.3
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 4.0e-07 58.2 80 46.2
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 8.9e-07 57.0 56 60.7
Ca_01143_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 5.7e-06 54.3 71 52.1


User provided reference genes

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