Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30588_v3 Cicer arietinum L. HOM05D000983 ORTHO05D010430 1.2e-256 889.4 494 100.0
Ca_04342_v3 Cicer arietinum L. HOM05D000983 ORTHO05D010430 1.2e-248 862.8 480 100.0
Lj1g0023223 Lotus japonicus HOM05D000983 ORTHO05D010430 1.2e-203 713.4 483 82.4
Glyma.08G244900 Glycine max HOM05D000983 ORTHO05D010430 2.6e-193 679.1 483 78.7
Medtr7g013300 Medicago truncatula HOM05D000983 ORTHO05D010430 2.6e-190 669.1 483 78.7
Psat3g201200 Pisum sativum HOM05D000983 ORTHO05D010430 1.5e-188 663.3 481 78.8
TPR.G33481 Trifolium pratense HOM05D000983 ORTHO05D010430 9.4e-188 660.6 483 78.7
VMungo1383G2848 Vigna mungo HOM05D000983 ORTHO05D010430 8.0e-171 604.4 481 71.9
Phvul.008G033800 Phaseolus vulgaris HOM05D000983 ORTHO05D010430 5.2e-170 601.7 481 71.7
Duzib147G1261 Durio zibethinus HOM05D000983 ORTHO05D010430 2.2e-168 596.3 483 68.3
FAN09G0106 Fragaria x ananassa HOM05D000983 ORTHO05D010430 6.3e-168 594.7 483 68.5
FAN14G5804 Fragaria x ananassa HOM05D005508 ORTHO05D010430 1.1e-167 594.0 483 68.1
arahy.Tifrunner.gnm1.ann1.3H63LQ Arachis hypogaea HOM05D000983 ORTHO05D010430 1.6e-166 590.1 480 69.8
COL.COLO4_07022 Corchorus olitorius HOM05D000983 ORTHO05D010430 2.0e-166 589.7 489 67.1
FvH4_6g46930 Fragaria vesca HOM05D000983 ORTHO05D010430 1.6e-163 580.1 483 67.1
Nitab4.5_0000212g0220 Nicotiana tabacum HOM05D000983 ORTHO05D010430 1.5e-161 573.5 483 63.6
FAN02G1587 Fragaria x ananassa HOM05D005508 ORTHO05D010430 2.0e-161 573.2 483 67.1
Gohir.A11G072900 Gossypium hirsutum HOM05D000983 ORTHO05D010430 2.6e-161 572.8 481 64.7
CsaV3_4G009250 Cucumis sativus L. HOM05D000983 ORTHO05D010430 3.4e-161 572.4 483 65.6
Manes.02G054500 Manihot esculenta HOM05D000983 ORTHO05D010430 1.3e-160 570.5 480 66.5
Dinv34946 Davidia involucrata HOM05D000983 ORTHO05D010430 3.7e-160 568.9 483 66.7
Gorai.007G082900 Gossypium raimondii HOM05D000983 ORTHO05D010430 6.4e-160 568.2 481 64.0
Gohir.D11G077200 Gossypium hirsutum HOM05D000983 ORTHO05D010430 1.8e-159 566.6 481 64.0
RcHm_v2.0_Chr2g0165911 Rosa chinensis HOM05D000983 ORTHO05D010430 1.8e-159 566.6 483 66.5
MELO3C019036.2 Cucumis melo HOM05D000983 ORTHO05D010430 2.4e-159 566.2 483 65.4
arahy.Tifrunner.gnm1.ann1.GXCU2T Arachis hypogaea HOM05D000983 ORTHO05D010430 4.1e-159 565.5 480 68.1
FAN05G2519 Fragaria x ananassa HOM05D005508 ORTHO05D010430 4.1e-159 565.5 483 66.5
Sabra17G0082200 Salix brachista HOM05D000983 ORTHO05D010430 5.4e-159 565.1 480 66.9
ClCG07G007430 Citrullus lanatus HOM05D000983 ORTHO05D010430 1.6e-158 563.5 483 65.4
Nn3g17429 Nelumbo nucifera HOM05D000983 ORTHO05D010430 3.9e-157 558.9 480 65.8
Cpa.g.sc14.168 Carica papaya HOM05D000983 ORTHO05D010430 6.6e-157 558.1 480 65.4
DCAR_025428 Daucus carota HOM05D000983 ORTHO05D010430 1.1e-156 557.4 475 62.7
CANSAT64G1729 Cannabis sativa HOM05D000983 ORTHO05D010430 9.5e-156 554.3 480 65.4
CAN.G398.16 Capsicum annuum HOM05D000983 ORTHO05D010430 2.1e-155 553.1 483 60.9
Nitab4.5_0005916g0040 Nicotiana tabacum HOM05D000983 ORTHO05D010430 4.7e-155 552.0 483 61.9
Cc07_g04160 Coffea canephora HOM05D000983 ORTHO05D010430 1.4e-154 550.4 483 63.8
Sed0002131 Sechium edule HOM05D000983 ORTHO05D010430 4.0e-154 548.9 483 63.4
Sopen02g016140 Solanum pennellii HOM05D000983 ORTHO05D010430 1.5e-153 547.0 483 61.1
SalBow1G7705 Salvia bowleyana HOM05D000983 ORTHO05D010430 6.6e-149 531.6 483 60.2
Peaxi162Scf00991g00317 Petunia axillaris HOM05D000983 ORTHO05D010430 3.3e-148 529.3 483 60.9
MD09G1066000 Malus domestica HOM05D000983 ORTHO05D010430 1.2e-147 527.3 483 63.8
Prupe.3G255500 Prunus persica HOM05D000983 ORTHO05D010430 2.3e-146 523.1 483 62.5
Solyc02g066950.4 Solanum lycopersicum HOM05D000983 ORTHO05D010430 1.5e-145 520.4 483 59.2
Potri.017G093200 Populus trichocarpa HOM05D000983 ORTHO05D010430 2.6e-145 519.6 480 63.3
MD17G1058700 Malus domestica HOM05D000983 ORTHO05D010430 3.9e-141 505.8 483 60.5
Migut.H00630 Erythranthe guttata HOM05D000983 ORTHO05D010430 3.3e-140 502.7 483 57.1
TAR371G0359 Trochodendron aralioides HOM05D000983 ORTHO05D010430 7.3e-140 501.5 483 61.1
ATR0064G030 Amborella trichopoda HOM05D000983 ORTHO05D010430 1.1e-127 461.1 483 54.5
CSS0011859 Camellia sinensis var. sinensis HOM05D000983 ORTHO05D010430 1.4e-127 460.7 483 56.7
GSVIVG01032922001 Vitis vinifera HOM05D000983 ORTHO05D010430 1.7e-120 437.2 483 54.0
CDE10G0125 Ceratophyllum demersum HOM05D000983 ORTHO05D010430 9.6e-116 421.4 482 52.5
SEGI_12982 Sequoiadendron giganteum HOM05D000983 ORTHO05D010430 6.9e-98 362.1 481 43.9
Mapoly0024s0059 Marchantia polymorpha HOM05D000983 ORTHO05D010430 6.3e-67 259.2 486 36.4
CDE10G1198 Ceratophyllum demersum HOM05D000983 ORTHO05D010430 1.2e-62 245.0 196 65.8
Lsat_1_v5_gn_2_87580 Lactuca sativa HOM05D000983 ORTHO05D010430 3.5e-49 200.3 137 72.3
CDE10G0096 Ceratophyllum demersum HOM05D000983 ORTHO05D010430 1.3e-48 198.4 213 55.9
HanXRQChr14g0449961 Helianthus annuus HOM05D000983 ORTHO05D010430 1.7e-43 181.4 183 53.6
ECA238G2889 Erigeron canadensis HOM05D000983 ORTHO05D010430 2.4e-42 177.6 199 52.8
Pp3c21_19790 Physcomitrium patens HOM05D000983 ORTHO05D010430 9.8e-36 155.6 488 28.9
Pp3c22_22380 Physcomitrium patens HOM05D000983 ORTHO05D010430 2.7e-33 147.5 409 30.3
Thecc.04G094500 Theobroma cacao HOM05D000983 ORTHO05D010430 9.3e-10 69.3 53 73.6


User provided reference genes

Program Settings