Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30144_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 0.0e+00 1342.8 692 100.0
Ca_03187_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 0.0e+00 1223.8 631 99.5
Psat0s11g0040 Pisum sativum HOM05D003169 ORTHO05D003700 4.4e-292 1007.7 632 82.8
TPR.G3619 Trifolium pratense HOM05D003169 ORTHO05D003700 2.8e-278 961.8 634 80.3
Medtr2g063620 Medicago truncatula HOM05D003169 ORTHO05D003700 3.3e-271 938.3 632 76.6
Lj3g0007581 Lotus japonicus HOM05D003169 ORTHO05D003700 3.1e-269 931.8 639 76.1
Glyma.08G233702 Glycine max HOM05D003169 ORTHO05D003700 1.1e-258 896.7 634 72.2
arahy.Tifrunner.gnm1.ann1.0T77JN Arachis hypogaea HOM05D003169 ORTHO05D003700 3.2e-258 895.2 642 71.3
arahy.Tifrunner.gnm1.ann1.4D9FZH Arachis hypogaea HOM05D003169 ORTHO05D003700 3.2e-258 895.2 642 71.3
Phvul.011G180100 Phaseolus vulgaris HOM05D003169 ORTHO05D003700 9.3e-258 893.6 634 71.6
Lj3g0024633 Lotus japonicus HOM05D003169 ORTHO05D003700 2.1e-257 892.5 636 71.9
Glyma.15G219200 Glycine max HOM05D003169 ORTHO05D003700 2.7e-257 892.1 635 72.1
TPR.G30141 Trifolium pratense HOM05D003169 ORTHO05D003700 3.0e-256 888.6 634 71.3
Medtr8g447090 Medicago truncatula HOM05D003169 ORTHO05D003700 5.8e-252 874.4 634 70.2
Medtr2g063813 Medicago truncatula HOM05D003169 ORTHO05D003700 2.2e-251 872.5 637 73.2
Medtr6g091960 Medicago truncatula HOM05D003169 ORTHO05D003700 3.8e-251 871.7 636 72.8
Psat4g185200 Pisum sativum HOM05D003169 ORTHO05D003700 2.4e-250 869.0 638 71.3
TAR627G0022 Trochodendron aralioides HOM05D003169 ORTHO05D003700 2.7e-249 865.5 635 70.2
Atru.chr1.22 Acer truncatum HOM05D003169 ORTHO05D003700 6.0e-249 864.4 635 69.1
Lalb_Chr19g0133151 Lupinus albus HOM05D003169 ORTHO05D003700 1.0e-248 863.6 634 70.2
Ciclev10004277m.g Citrus clementina HOM05D003169 ORTHO05D003700 5.1e-248 861.3 635 69.1
Rhsim06G0244800 Rhododendron simsii HOM05D003169 ORTHO05D003700 2.5e-247 859.0 635 69.9
TPR.G3624 Trifolium pratense HOM05D003169 ORTHO05D003700 5.6e-247 857.8 638 73.0
Prupe.4G126100 Prunus persica HOM05D003169 ORTHO05D003700 2.8e-246 855.5 635 69.0
Actinidia26204 Actinidia chinensis HOM05D003169 ORTHO05D003700 6.2e-246 854.4 635 69.9
QL04p095761 Quercus lobata HOM05D003169 ORTHO05D003700 6.2e-246 854.4 634 69.6
FAN21G1262 Fragaria x ananassa HOM05D003169 ORTHO05D003700 1.8e-245 852.8 635 68.8
Gorai.013G146500 Gossypium raimondii HOM05D003169 ORTHO05D003700 4.0e-245 851.7 635 69.1
FAN16G1231 Fragaria x ananassa HOM05D003169 ORTHO05D003700 6.9e-245 850.9 635 68.8
Thecc.07G189500 Theobroma cacao HOM05D003169 ORTHO05D003700 6.9e-245 850.9 635 69.1
Gohir.A13G126700 Gossypium hirsutum HOM05D003169 ORTHO05D003700 9.0e-245 850.5 635 69.1
RcHm_v2.0_Chr5g0023151 Rosa chinensis HOM05D003169 ORTHO05D003700 2.0e-244 849.4 635 68.7
FAN25G3213 Fragaria x ananassa HOM05D003169 ORTHO05D003700 2.6e-244 849.0 635 68.7
Gohir.D13G130400 Gossypium hirsutum HOM05D003169 ORTHO05D003700 2.6e-244 849.0 635 69.0
FvH4_3g13920 Fragaria vesca HOM05D003169 ORTHO05D003700 3.4e-244 848.6 635 68.7
Potri.010G174900 Populus trichocarpa HOM05D003169 ORTHO05D003700 3.4e-244 848.6 635 68.0
CAN.G492.81 Capsicum annuum HOM05D003169 ORTHO05D003700 4.5e-244 848.2 634 68.5
Lalb_Chr20g0108381 Lupinus albus HOM05D003169 ORTHO05D003700 5.8e-244 847.8 635 72.1
Sopen10g001470 Solanum pennellii HOM05D003169 ORTHO05D003700 2.2e-243 845.9 634 68.6
Duzib213G0284 Durio zibethinus HOM05D003169 ORTHO05D003700 4.9e-243 844.7 636 68.9
TWI38G0104 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 1.1e-242 843.6 637 67.8
Ca_22977_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 1.4e-242 843.2 638 68.8
Manes.16G048930 Manihot esculenta HOM05D003169 ORTHO05D003700 1.4e-242 843.2 636 68.7
Nn7g38410 Nelumbo nucifera HOM05D003169 ORTHO05D003700 1.4e-242 843.2 635 68.7
Sed0006985 Sechium edule HOM05D003169 ORTHO05D003700 1.4e-242 843.2 635 68.3
TWI38G0597 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 1.4e-242 843.2 637 68.0
Sabra10G0134700 Salix brachista HOM05D003169 ORTHO05D003700 1.9e-242 842.8 635 67.7
Haze_18485 Corylus avellana HOM05D003169 ORTHO05D003700 1.6e-241 839.7 634 68.3
Potri.008G081200 Populus trichocarpa HOM05D003169 ORTHO05D003700 1.6e-241 839.7 635 68.2
THA.LOC104812392 Tarenaya hassleriana HOM05D003169 ORTHO05D003700 1.6e-241 839.7 657 66.5
GSVIVG01036703001 Vitis vinifera HOM05D003169 ORTHO05D003700 1.6e-241 839.7 668 65.7
MELO3C019615.2 Cucumis melo HOM05D003169 ORTHO05D003700 2.1e-241 839.3 635 67.9
CSS0011288 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 4.6e-241 838.2 635 68.5
CsaV3_6G013370 Cucumis sativus L. HOM05D003169 ORTHO05D003700 7.9e-241 837.4 635 67.9
Dinv42454 Davidia involucrata HOM05D003169 ORTHO05D003700 1.3e-240 836.6 637 68.0
Hma1.2p1_0754F.1_g213010 Hydrangea macrophylla HOM05D003169 ORTHO05D003700 2.3e-240 835.9 635 68.0
vmacro22494 Vaccinium macrocarpon HOM05D003169 ORTHO05D003700 2.3e-240 835.9 680 64.9
CANSAT56G1976 Cannabis sativa HOM05D003169 ORTHO05D003700 8.7e-240 833.9 635 67.6
MD05G1239900 Malus domestica HOM05D003169 ORTHO05D003700 8.7e-240 833.9 635 67.4
Peaxi162Scf00670g00216 Petunia axillaris HOM05D003169 ORTHO05D003700 1.5e-239 833.2 634 68.5
Nitab4.5_0003291g0060 Nicotiana tabacum HOM05D003169 ORTHO05D003700 1.3e-238 830.1 656 65.7
Oeu005060.1 Olea europaea HOM05D003169 ORTHO05D003700 6.2e-238 827.8 634 67.5
MD10G1218000 Malus domestica HOM05D003169 ORTHO05D003700 1.8e-237 826.2 635 67.2
BcaC08g47495 Brassica carinata HOM05D003169 ORTHO05D003700 3.1e-237 825.5 635 67.2
A07p44430 Brassica napus HOM05D003169 ORTHO05D003700 3.1e-237 825.5 635 67.2
C06p53240 Brassica napus HOM05D003169 ORTHO05D003700 3.1e-237 825.5 635 67.2
BolC6t40342H Brassica oleracea HOM05D003169 ORTHO05D003700 3.1e-237 825.5 633 67.5
Cfa017765 Carpinus fangiana HOM05D003169 ORTHO05D003700 3.1e-237 825.5 643 67.3
Eucgr.F04478 Eucalyptus grandis HOM05D003169 ORTHO05D003700 3.1e-237 825.5 635 68.2
BcaB02g08679 Brassica carinata HOM05D003169 ORTHO05D003700 1.2e-236 823.5 635 67.1
BraA07t31952Z Brassica rapa HOM05D003169 ORTHO05D003700 2.6e-236 822.4 633 67.3
Carub.0002s2621 Capsella rubella HOM05D003169 ORTHO05D003700 2.6e-236 822.4 635 67.4
Sc06g0001640 Simmondsia chinensis HOM05D003169 ORTHO05D003700 7.6e-236 820.8 635 66.0
Thhalv10018021m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 1.3e-235 820.1 635 66.5
AT1G79350 Arabidopsis thaliana HOM05D003169 ORTHO05D003700 1.7e-235 819.7 635 66.5
CARHR073010 Cardamine hirsuta HOM05D003169 ORTHO05D003700 2.9e-235 818.9 635 66.3
MSTRG.7098 Avicennia marina HOM05D003169 ORTHO05D003700 3.8e-235 818.5 634 68.6
Sp5g34410 Schrenkiella parvula HOM05D003169 ORTHO05D003700 4.2e-234 815.1 635 66.9
Lsat_1_v5_gn_7_69060 Lactuca sativa HOM05D003169 ORTHO05D003700 7.1e-234 814.3 638 66.6
TAR629G1197 Trochodendron aralioides HOM05D003169 ORTHO05D003700 1.0e-232 810.4 635 66.1
HanXRQChr03g0077801 Helianthus annuus HOM05D003169 ORTHO05D003700 6.7e-232 807.7 634 66.4
Oeu025995.1 Olea europaea HOM05D003169 ORTHO05D003700 8.7e-232 807.4 684 62.4
ECA240G3251 Erigeron canadensis HOM05D003169 ORTHO05D003700 5.7e-231 804.7 635 65.8
SGA_v2.0_scaffold186G40168 Striga asiatica HOM05D003169 ORTHO05D003700 7.4e-231 804.3 635 67.9
ATR0794G028 Amborella trichopoda HOM05D003169 ORTHO05D003700 2.8e-230 802.4 635 65.4
EL10Ac2g03244 Beta vulgaris HOM05D003169 ORTHO05D003700 2.8e-230 802.4 638 65.8
Aa31LG4G1680 Aethionema arabicum HOM05D003169 ORTHO05D003700 1.8e-229 799.7 644 64.8
Aqoxy1G01380 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 1.2e-228 797.0 635 64.9
AUR62041054 Chenopodium quinoa HOM05D003169 ORTHO05D003700 4.5e-228 795.0 637 65.3
ClCG02G018810 Citrullus lanatus HOM05D003169 ORTHO05D003700 1.3e-227 793.5 663 63.3
Oeu029454.1 Olea europaea HOM05D003169 ORTHO05D003700 5.0e-227 791.6 634 66.6
PSO675G7315 Papaver somniferum HOM05D003169 ORTHO05D003700 8.4e-227 790.8 637 67.0
Ah.16g106160 Amaranthus hybridus HOM05D003169 ORTHO05D003700 1.1e-226 790.4 636 64.2
PGR031G0700 Punica granatum HOM05D003169 ORTHO05D003700 3.0e-224 782.3 637 64.8
arahy.Tifrunner.gnm1.ann1.JSN7JY Arachis hypogaea HOM05D003169 ORTHO05D003700 4.3e-223 778.5 664 62.8
Migut.M01496 Erythranthe guttata HOM05D003169 ORTHO05D003700 3.7e-222 775.4 634 65.1
arahy.Tifrunner.gnm1.ann1.THX68V Arachis hypogaea HOM05D003169 ORTHO05D003700 6.1e-217 758.1 636 64.5
Peaxi162Scf00420g00518 Petunia axillaris HOM05D003169 ORTHO05D003700 5.7e-215 751.5 631 64.2
HPP92_005947 Vanilla planifolia HOM05D003169 ORTHO05D003700 5.7e-215 751.5 635 61.7
Zm00001eb430630 Zea mays HOM05D003169 ORTHO05D003700 7.7e-212 741.1 634 61.5
Zm00001eb413950 Zea mays HOM05D003169 ORTHO05D003700 1.3e-211 740.3 636 60.4
Rhsim02G0183500 Rhododendron simsii HOM05D003169 ORTHO05D003700 3.1e-205 719.2 667 59.1
CSS0003080 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 2.9e-203 712.6 647 60.1
AUR62043014 Chenopodium quinoa HOM05D003169 ORTHO05D003700 4.2e-202 708.8 602 63.1
Pp3c3_5410 Physcomitrium patens HOM05D003169 ORTHO05D003700 1.1e-197 694.1 634 57.4
Mapoly0153s0011 Marchantia polymorpha HOM05D003169 ORTHO05D003700 3.1e-197 692.6 635 57.2
FAN11G1789 Fragaria x ananassa HOM05D003169 ORTHO05D003700 1.2e-196 690.6 852 49.1
HanXRQChr13g0408941 Helianthus annuus HOM05D003169 ORTHO05D003700 1.9e-194 683.3 633 58.3
DCAR_016853 Daucus carota HOM05D003169 ORTHO05D003700 1.2e-191 674.1 556 62.2
AagrBONN_evm.TU.Sc2ySwM_228.2486 Anthoceros agrestis HOM05D003169 ORTHO05D003700 3.7e-190 669.1 641 55.7
CBR_g11926 Chara braunii HOM05D003169 ORTHO05D000002 1.7e-187 660.2 633 57.2
Solyc10g005490.4 Solanum lycopersicum HOM05D003169 ORTHO05D003700 9.4e-186 654.4 527 64.3
CiPaw.15G111900 Carya illinoinensis HOM05D003169 ORTHO05D003700 9.8e-183 644.4 525 65.0
unitig_32.g11074 Utricularia gibba HOM05D003169 ORTHO05D003700 1.2e-177 627.5 634 55.7
PSO541G6458 Papaver somniferum HOM05D003169 ORTHO05D003700 3.0e-171 606.3 634 53.3
DCAR_013706 Daucus carota HOM05D003169 ORTHO05D003700 6.8e-168 595.1 603 55.7
VMungo1127G0472 Vigna mungo HOM05D003169 ORTHO05D003700 1.1e-160 571.2 387 73.9
Nitab4.5_0007774g0020 Nicotiana tabacum HOM05D003169 ORTHO05D003700 2.2e-158 563.5 521 59.3
DCAR_013705 Daucus carota HOM05D003169 ORTHO05D003700 1.7e-155 553.9 564 54.3
Os04g0609700 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 2.5e-146 523.5 497 56.7
Lj2A8G61 Lonicera japonica HOM05D003169 ORTHO05D003700 2.8e-145 520.0 500 58.2
MBI18_g40795_MAGBIO Magnolia biondii HOM05D003169 ORTHO05D003700 2.4e-144 516.9 638 49.5
HanXRQChr13g0408911 Helianthus annuus HOM05D003169 ORTHO05D003700 5.4e-141 505.8 520 55.4
COL.COLO4_25000 Corchorus olitorius HOM05D003169 ORTHO05D003700 3.5e-132 476.5 393 63.9
Cc00_g09100 Coffea canephora HOM05D003169 ORTHO05D003700 5.7e-114 416.0 323 66.6
TPR.G3623 Trifolium pratense HOM05D003169 ORTHO05D003700 4.1e-112 409.8 360 61.9
Cc00_g09110 Coffea canephora HOM05D003169 ORTHO05D003700 3.2e-109 400.2 300 67.7
Haze_26591 Corylus avellana HOM05D003169 ORTHO05D003700 7.9e-108 395.6 737 37.7
Cpa.g.sc32.149 Carica papaya HOM05D003169 ORTHO05D003700 3.0e-91 340.5 358 53.9
VMungo1127G0192 Vigna mungo HOM05D003169 ORTHO05D003700 1.1e-90 338.6 215 75.8
MCO01G648 Micromonas commoda HOM05D003169 ORTHO05D003700 1.1e-88 332.0 638 37.0
MCO16G570 Micromonas commoda HOM05D003169 ORTHO05D003700 1.7e-86 324.7 612 35.8
Os08g0223766 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 3.8e-86 323.6 301 60.1
Cre13.g578501 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 1.4e-80 305.1 697 35.0
SEGI_39235 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 1.2e-71 275.4 168 76.8
SEGI_24184 Sequoiadendron giganteum HOM05D003169 ORTHO05D000014 5.7e-66 256.5 335 47.5
TPR.G14822 Trifolium pratense HOM05D003169 ORTHO05D003700 2.2e-65 254.6 506 36.4
Nn7g38412 Nelumbo nucifera HOM05D003169 ORTHO05D003700 6.3e-65 253.1 169 77.5
Cre07.g350100 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 8.3e-65 252.7 605 32.1
PRCOL_00005992 Prasinoderma coloniale HOM05D003169 ORTHO05D003700 1.8e-64 251.5 842 29.9
Medtr6g091930 Medicago truncatula HOM05D003169 ORTHO05D003700 9.2e-64 249.2 133 88.7
HanXRQChr16g0505691 Helianthus annuus HOM05D003169 ORTHO05D003700 2.8e-60 237.7 144 81.2
Os08g0223833 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 4.0e-59 233.8 213 58.2
Lj2A8G63 Lonicera japonica HOM05D003169 ORTHO05D003700 2.4e-56 224.6 165 66.7
SMO358G0497 Selaginella moellendorffii HOM05D003169 ORTHO05D003700 5.9e-55 219.9 133 80.5
Thhalv10000653m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 1.5e-53 215.3 151 76.2
QL04p010784 Quercus lobata HOM05D003169 ORTHO05D003700 1.4e-48 198.7 114 86.0
TPR.G36388 Trifolium pratense HOM05D003169 ORTHO05D036887 2.8e-44 184.5 140 66.4
Cre01.g053250 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 1.4e-43 182.2 298 39.3
Cre02.g095045 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 5.4e-40 170.2 304 37.5
SEGI_10615 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 7.1e-40 169.9 114 75.4
Cpa.g.sc32.147 Carica papaya HOM05D003169 ORTHO05D003700 1.1e-37 162.5 114 71.9
Oeu005061.1 Olea europaea HOM05D003169 ORTHO05D003700 1.9e-37 161.8 91 80.2
MBI18_g42879_MAGBIO Magnolia biondii HOM05D003169 ORTHO05D003700 6.2e-36 156.8 89 78.7
Hund20128 Selenicereus undatus HOM05D003169 ORTHO05D003700 1.1e-32 146.0 98 74.5
Thhalv10000387m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 7.1e-32 143.3 84 75.0
COL.COLO4_25001 Corchorus olitorius HOM05D003169 ORTHO05D003700 1.3e-30 139.0 75 92.0
HanXRQChr13g0408921 Helianthus annuus HOM05D003169 ORTHO05D003700 1.7e-30 138.7 89 67.4
arahy.Tifrunner.gnm1.ann1.2P0S20 Arachis hypogaea HOM05D003169 ORTHO05D003700 9.9e-26 122.9 85 69.4
Actinidia33340 Actinidia chinensis HOM05D003169 ORTHO05D003700 4.6e-23 114.0 63 88.9
RhsimUnG0048600 Rhododendron simsii HOM05D003169 ORTHO05D003700 1.3e-20 105.9 74 73.0
Nitab4.5_0020695g0020 Nicotiana tabacum HOM05D003169 ORTHO05D036887 1.9e-13 82.0 103 42.7
SGA_v2.0_scaffold4G01862 Striga asiatica HOM05D003543 ORTHO05D004112 3.7e-12 77.8 58 65.5
MELO3C035414.2 Cucumis melo HOM05D003169 ORTHO05D003700 2.0e-10 72.0 115 36.5
Actinidia33341 Actinidia chinensis HOM05D003169 ORTHO05D003700 1.9e-08 65.5 35 80.0


User provided reference genes

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