Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_28668_v3 Cicer arietinum L. HOM05D005018 ORTHO05D006786 2.1e-100 369.0 187 100.0
Haze_26929 Corylus avellana HOM05D005018 ORTHO05D006786 6.1e-47 191.4 181 55.8
Haze_26659 Corylus avellana HOM05D005018 ORTHO05D006786 7.5e-45 184.5 195 49.2
Duzib264G1136 Durio zibethinus HOM05D005018 ORTHO05D006786 1.4e-43 180.3 185 49.7
Lj4g0009092 Lotus japonicus HOM05D005018 ORTHO05D006786 1.4e-43 180.3 184 50.0
CiPaw.03G118700 Carya illinoinensis HOM05D005018 ORTHO05D006786 4.1e-43 178.7 182 51.1
Ca_17625_v3 Cicer arietinum L. HOM05D005018 ORTHO05D006786 4.1e-43 178.7 184 50.0
Thecc.01G136300 Theobroma cacao HOM05D005018 ORTHO05D006786 4.1e-43 178.7 185 48.6
MELO3C024598.2 Cucumis melo HOM05D005018 ORTHO05D006786 5.4e-43 178.3 182 50.0
TPR.G37346 Trifolium pratense HOM05D005018 ORTHO05D006786 5.4e-43 178.3 184 50.5
Glyma.08G001700 Glycine max HOM05D005018 ORTHO05D006786 7.0e-43 177.9 184 49.5
VMungo0251G2317 Vigna mungo HOM05D005018 ORTHO05D006786 7.0e-43 177.9 184 48.4
Cfa002185 Carpinus fangiana HOM05D005018 ORTHO05D006786 9.1e-43 177.6 182 50.5
Glyma.05G193600 Glycine max HOM05D005018 ORTHO05D006786 9.1e-43 177.6 184 48.9
arahy.Tifrunner.gnm1.ann1.IZT9KT Arachis hypogaea HOM05D005018 ORTHO05D006786 1.2e-42 177.2 184 49.5
Gohir.A09G005200 Gossypium hirsutum HOM05D005018 ORTHO05D006786 1.2e-42 177.2 185 48.1
Gohir.D09G004500 Gossypium hirsutum HOM05D005018 ORTHO05D006786 1.2e-42 177.2 185 48.1
Gorai.006G006100 Gossypium raimondii HOM05D005018 ORTHO05D006786 1.2e-42 177.2 185 48.1
MCO09G341 Micromonas commoda HOM05D005018 ORTHO05D006786 1.2e-42 177.2 182 51.6
AUR62006851 Chenopodium quinoa HOM05D005018 ORTHO05D006786 1.6e-42 176.8 184 50.0
Migut.D00797 Erythranthe guttata HOM05D005018 ORTHO05D006786 1.6e-42 176.8 182 50.0
Prupe.5G002000 Prunus persica HOM05D005018 ORTHO05D006786 1.6e-42 176.8 182 50.0
Aqoxy6G00298 Aquilegia oxysepala HOM05D005018 ORTHO05D006786 2.0e-42 176.4 185 50.8
CsaV3_6G041220 Cucumis sativus L. HOM05D005018 ORTHO05D006786 2.7e-42 176.0 182 50.0
ECA240G3046 Erigeron canadensis HOM05D005018 ORTHO05D006786 2.7e-42 176.0 184 50.0
TWI79G0394 Tripterygium wilfordii HOM05D005018 ORTHO05D006786 2.7e-42 176.0 185 49.2
Ah.06g190950 Amaranthus hybridus HOM05D005018 ORTHO05D006786 3.5e-42 175.6 182 50.5
Medtr8g094030 Medicago truncatula HOM05D005018 ORTHO05D006786 3.5e-42 175.6 187 48.7
Cre10.g428678 Chlamydomonas reinhardtii HOM05D005018 ORTHO05D006786 4.5e-42 175.3 187 49.7
MD02G1260800 Malus domestica HOM05D005018 ORTHO05D006786 4.5e-42 175.3 186 47.8
AagrBONN_evm.TU.Sc2ySwM_344.2451 Anthoceros agrestis HOM05D005018 ORTHO05D006786 5.9e-42 174.9 185 49.2
arahy.Tifrunner.gnm1.ann1.YY52IF Arachis hypogaea HOM05D005018 ORTHO05D006786 5.9e-42 174.9 184 48.9
PGR119G0715 Punica granatum HOM05D005018 ORTHO05D006786 5.9e-42 174.9 184 49.5
Lalb_Chr07g0184291 Lupinus albus HOM05D005018 ORTHO05D006786 7.7e-42 174.5 182 50.0
MD07G1060700 Malus domestica HOM05D005018 ORTHO05D006786 7.7e-42 174.5 186 47.8
RcHm_v2.0_Chr1g0331701 Rosa chinensis HOM05D005018 ORTHO05D006786 7.7e-42 174.5 182 49.5
EL10Ac4g09610 Beta vulgaris HOM05D005018 ORTHO05D006786 1.0e-41 174.1 182 50.0
Potri.005G066300 Populus trichocarpa HOM05D005018 ORTHO05D006786 1.0e-41 174.1 184 49.5
Hund28182 Selenicereus undatus HOM05D005018 ORTHO05D006786 1.0e-41 174.1 182 50.5
Hund28185 Selenicereus undatus HOM05D005018 ORTHO05D006786 1.0e-41 174.1 182 50.5
Cpa.g.sc42.187 Carica papaya HOM05D005018 ORTHO05D006786 1.3e-41 173.7 182 49.5
Pp3c16_24810 Physcomitrium patens HOM05D005018 ORTHO05D006786 1.3e-41 173.7 182 51.6
Dinv15533 Davidia involucrata HOM05D005018 ORTHO05D006786 1.7e-41 173.3 182 49.5
FvH4_7g05150 Fragaria vesca HOM05D005018 ORTHO05D006786 1.7e-41 173.3 182 48.9
CANSAT01G0968 Cannabis sativa HOM05D005018 ORTHO05D006786 2.3e-41 172.9 186 48.4
CSS0009965 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 2.9e-41 172.6 182 49.5
Eucgr.I00131 Eucalyptus grandis HOM05D005018 ORTHO05D006786 2.9e-41 172.6 184 49.5
HanXRQChr03g0092941 Helianthus annuus HOM05D005018 ORTHO05D006786 2.9e-41 172.6 185 48.6
CSS0041776 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 3.8e-41 172.2 182 49.5
Rhsim12G0009100 Rhododendron simsii HOM05D005018 ORTHO05D006786 3.8e-41 172.2 187 49.2
SalBow6G7214 Salvia bowleyana HOM05D005018 ORTHO05D006786 3.8e-41 172.2 182 50.5
Sed0008983 Sechium edule HOM05D005018 ORTHO05D006786 3.8e-41 172.2 182 48.9
Actinidia06572 Actinidia chinensis HOM05D005018 ORTHO05D006786 5.0e-41 171.8 182 49.5
Ciclev10003172m.g Citrus clementina HOM05D005018 ORTHO05D006786 5.0e-41 171.8 182 49.5
Psat7g044640 Pisum sativum HOM05D005018 ORTHO05D006786 5.0e-41 171.8 184 47.8
MSTRG.21275 Avicennia marina HOM05D005018 ORTHO05D006786 6.6e-41 171.4 182 50.0
CAN.G410.44 Capsicum annuum HOM05D005018 ORTHO05D006786 6.6e-41 171.4 182 48.4
Os01g0960300 Oryza sativa ssp. japonica HOM05D005018 ORTHO05D006786 6.6e-41 171.4 185 49.2
Atru.chr4.947 Acer truncatum HOM05D005018 ORTHO05D006786 8.6e-41 171.0 184 48.4
HPP92_016130 Vanilla planifolia HOM05D005018 ORTHO05D006786 8.6e-41 171.0 186 47.8
Cfa023424 Carpinus fangiana HOM05D005018 ORTHO05D006786 1.1e-40 170.6 199 45.2
Nn5g28451 Nelumbo nucifera HOM05D005018 ORTHO05D006786 1.1e-40 170.6 185 47.6
Sopen01g030230 Solanum pennellii HOM05D005018 ORTHO05D006786 1.1e-40 170.6 182 48.4
FAN06G2729 Fragaria x ananassa HOM05D005018 ORTHO05D006786 1.5e-40 170.2 184 48.9
Manes.02G085200 Manihot esculenta HOM05D005018 ORTHO05D006786 1.5e-40 170.2 182 48.4
Mapoly0069s0053 Marchantia polymorpha HOM05D005018 ORTHO05D006786 1.5e-40 170.2 184 48.4
SMO139G0120 Selaginella moellendorffii HOM05D005018 ORTHO05D006786 1.5e-40 170.2 182 50.0
CBR_g18682 Chara braunii HOM05D005018 ORTHO05D006786 1.9e-40 169.9 182 47.8
FAN03G0747 Fragaria x ananassa HOM05D005018 ORTHO05D006786 1.9e-40 169.9 184 48.9
DCAR_018989 Daucus carota HOM05D005018 ORTHO05D006786 2.5e-40 169.5 185 48.1
TAR625G0766 Trochodendron aralioides HOM05D005018 ORTHO05D006786 2.5e-40 169.5 185 46.5
Nitab4.5_0006307g0020 Nicotiana tabacum HOM05D005018 ORTHO05D006786 9.5e-40 167.5 182 47.3
BcaC01g03124 Brassica carinata HOM05D005018 ORTHO05D006786 1.2e-39 167.2 182 47.8
A03p44940 Brassica napus HOM05D005018 ORTHO05D006786 1.2e-39 167.2 182 47.8
C03p55820 Brassica napus HOM05D005018 ORTHO05D006786 1.2e-39 167.2 182 47.8
BraA03t13631Z Brassica rapa HOM05D005018 ORTHO05D006786 1.2e-39 167.2 182 47.8
Carub.0003s2795 Capsella rubella HOM05D005018 ORTHO05D006786 1.2e-39 167.2 182 47.8
AL3G45320 Arabidopsis lyrata HOM05D005018 ORTHO05D006786 1.6e-39 166.8 182 47.8
BcaB08g34530 Brassica carinata HOM05D005018 ORTHO05D006786 1.6e-39 166.8 182 47.8
Sp3g26900 Schrenkiella parvula HOM05D005018 ORTHO05D006786 1.6e-39 166.8 182 47.3
AT2G13440 Arabidopsis thaliana HOM05D005018 ORTHO05D006786 2.1e-39 166.4 182 47.8
ATR0730G013 Amborella trichopoda HOM05D005018 ORTHO05D006786 2.8e-39 166.0 185 46.5
CARHR104850 Cardamine hirsuta HOM05D005018 ORTHO05D006786 2.8e-39 166.0 182 48.4
Thhalv10022575m.g Eutrema salsugineum HOM05D005018 ORTHO05D006786 3.6e-39 165.6 182 47.3
THA.LOC104804457 Tarenaya hassleriana HOM05D005018 ORTHO05D006786 4.7e-39 165.2 182 47.3
BolC3t17863H Brassica oleracea HOM05D005018 ORTHO05D006786 6.1e-39 164.9 183 48.1
QL10p041655 Quercus lobata HOM05D005018 ORTHO05D006786 6.1e-39 164.9 202 45.5
QL10p041885 Quercus lobata HOM05D005018 ORTHO05D006786 6.1e-39 164.9 202 45.5
MD07G1060500 Malus domestica HOM05D005018 ORTHO05D006786 8.0e-39 164.5 206 43.7
Peaxi162Scf00087g00314 Petunia axillaris HOM05D005018 ORTHO05D006786 1.0e-38 164.1 182 47.3
Lsat_1_v5_gn_3_126721 Lactuca sativa HOM05D005018 ORTHO05D006786 1.8e-38 163.3 198 45.5
Aa31sc255G10 Aethionema arabicum HOM05D005018 ORTHO05D006786 5.2e-38 161.8 186 46.8
GSVIVG01026449001 Vitis vinifera HOM05D005018 ORTHO05D006786 5.2e-38 161.8 173 49.7
MBI03_g13501_MAGBIO Magnolia biondii HOM05D005018 ORTHO05D006786 4.4e-37 158.7 184 45.7
ClCG01G015110 Citrullus lanatus HOM05D005018 ORTHO05D006786 1.3e-36 157.1 181 46.4
SGA_v2.0_scaffold5G02934 Striga asiatica HOM05D005018 ORTHO05D006786 1.7e-36 156.8 220 41.8
MCO09G386 Micromonas commoda HOM05D005018 ORTHO05D006786 2.9e-36 156.0 169 48.5
Sabra05G0054700 Salix brachista HOM05D005018 ORTHO05D006786 3.2e-35 152.5 230 40.9
Nitab4.5_0000316g0160 Nicotiana tabacum HOM05D005018 ORTHO05D006786 1.0e-30 137.5 192 42.2
Phvul.002G274000 Phaseolus vulgaris HOM05D005018 ORTHO05D006786 8.9e-30 134.4 134 50.7
PRCOL_00006684 Prasinoderma coloniale HOM05D005018 ORTHO05D006786 1.5e-29 133.7 161 46.0
COL.COLO4_35799 Corchorus olitorius HOM05D005018 ORTHO05D006786 4.1e-27 125.6 182 39.6
unitig_0.g220 Utricularia gibba HOM05D005018 ORTHO05D006786 2.0e-26 123.2 182 40.7
Cc02_g29450 Coffea canephora HOM05D005018 ORTHO05D006786 1.3e-25 120.6 109 54.1
FAN10G3591 Fragaria x ananassa HOM05D005018 ORTHO05D006786 1.7e-25 120.2 182 38.5
vmacro23049 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 1.3e-17 94.0 386 24.1
Lj2A615T20 Lonicera japonica HOM05D005018 ORTHO05D006786 2.5e-16 89.7 73 56.2
Sc09g0002290 Simmondsia chinensis HOM05D005018 ORTHO05D006786 4.0e-14 82.4 102 44.1
Zm00001eb132400 Zea mays HOM05D005018 ORTHO05D006786 1.7e-12 77.0 101 42.6
Zm00001eb319120 Zea mays HOM05D005018 ORTHO05D006786 8.4e-12 74.7 74 51.4
SMO157G0012 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 1.2e-10 70.9 100 42.0
SMO139G0025 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 1.0e-09 67.8 100 41.0
Solyc01g068290.4 Solanum lycopersicum HOM05D005018 ORTHO05D006786 1.1e-08 64.3 81 40.7
Oeu026684.1 Olea europaea HOM05D005018 ORTHO05D006786 9.6e-08 61.2 91 41.8
SEGI_26662 Sequoiadendron giganteum HOM05D005018 ORTHO05D006786 2.4e-06 56.6 39 59.0
Haze_25309 Corylus avellana HOM05D005018 ORTHO05D006786 4.0e-06 55.8 62 45.2
Cc02_g29440 Coffea canephora HOM05D005018 ORTHO05D006786 5.2e-06 55.5 62 45.2
Oeu026685.1 Olea europaea HOM05D005018 ORTHO05D006786 8.9e-06 54.7 62 45.2


User provided reference genes

Program Settings