Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27667_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 0.0e+00 1505.3 747 100.0
TPR.G8155 Trifolium pratense HOM05D002653 ORTHO05D002623 0.0e+00 1262.3 762 82.9
Psat0s3513g0080 Pisum sativum HOM05D002653 ORTHO05D002623 0.0e+00 1245.0 762 82.5
Medtr2g007250 Medicago truncatula HOM05D002653 ORTHO05D002623 0.0e+00 1237.6 755 81.7
Glyma.13G174600 Glycine max HOM05D002653 ORTHO05D002623 0.0e+00 1102.8 753 72.2
LjContig00141g0016117 Lotus japonicus HOM05D002653 ORTHO05D002623 0.0e+00 1093.6 756 72.0
Phvul.002G328600 Phaseolus vulgaris HOM05D002653 ORTHO05D002623 0.0e+00 1087.8 753 72.1
Lj4g0020533 Lotus japonicus HOM05D002653 ORTHO05D002623 0.0e+00 1082.4 756 71.4
arahy.Tifrunner.gnm1.ann1.21MRAZ Arachis hypogaea HOM05D002653 ORTHO05D002623 2.4e-299 1031.9 766 67.8
Lalb_Chr01g0009381 Lupinus albus HOM05D002653 ORTHO05D002623 1.3e-294 1016.1 760 68.8
VMungo0251G0195 Vigna mungo HOM05D002653 ORTHO05D002623 1.8e-278 962.6 753 65.9
arahy.Tifrunner.gnm1.ann1.GW217K Arachis hypogaea HOM05D002653 ORTHO05D002623 4.3e-261 904.8 765 61.7
Prupe.3G028500 Prunus persica HOM05D002653 ORTHO05D002623 5.2e-214 748.4 788 52.3
CiPaw.06G000600 Carya illinoinensis HOM05D002653 ORTHO05D002623 9.5e-208 727.6 764 51.3
Cfa016258 Carpinus fangiana HOM05D002653 ORTHO05D002623 1.0e-206 724.2 779 50.3
Haze_24505 Corylus avellana HOM05D002653 ORTHO05D002623 1.5e-205 720.3 779 50.3
QL04p064964 Quercus lobata HOM05D002653 ORTHO05D002623 5.8e-205 718.4 783 51.5
RcHm_v2.0_Chr2g0148311 Rosa chinensis HOM05D002653 ORTHO05D002623 1.9e-203 713.4 777 50.1
MD17G1156800 Malus domestica HOM05D002653 ORTHO05D002623 1.2e-202 710.7 792 49.9
FAN14G5588 Fragaria x ananassa HOM05D002653 ORTHO05D002623 4.6e-202 708.8 773 49.0
FvH4_6g36300 Fragaria vesca HOM05D002653 ORTHO05D002623 6.0e-202 708.4 773 49.2
FAN02G0462 Fragaria x ananassa HOM05D002653 ORTHO05D002623 3.9e-201 705.7 772 48.7
FAN09G4442 Fragaria x ananassa HOM05D002653 ORTHO05D002623 2.5e-200 703.0 775 49.5
FAN14G0870 Fragaria x ananassa HOM05D002653 ORTHO05D002623 8.0e-199 698.0 773 48.8
Ciclev10010886m.g Citrus clementina HOM05D002653 ORTHO05D002623 3.2e-195 686.0 799 47.3
Dinv38369 Davidia involucrata HOM05D002653 ORTHO05D002623 2.7e-194 682.9 800 46.0
TWI34G1636 Tripterygium wilfordii HOM05D002653 ORTHO05D002623 6.0e-194 681.8 789 49.2
CANSAT01G2419 Cannabis sativa HOM05D002653 ORTHO05D002623 5.6e-192 675.2 766 48.2
Sabra16G0308200 Salix brachista HOM05D002653 ORTHO05D002623 7.3e-192 674.9 781 48.4
CSS0041142 Camellia sinensis var. sinensis HOM05D002653 ORTHO05D002623 9.5e-192 674.5 799 46.8
Potri.001G455600 Populus trichocarpa HOM05D002653 ORTHO05D002623 6.8e-190 668.3 787 47.9
Manes.09G076300 Manihot esculenta HOM05D002653 ORTHO05D002623 1.2e-189 667.5 789 47.7
Manes.11G165700 Manihot esculenta HOM05D002653 ORTHO05D002623 9.9e-189 664.5 787 47.1
Duzib114G0204 Durio zibethinus HOM05D002653 ORTHO05D002623 5.4e-187 658.7 783 46.5
TAR624G1146 Trochodendron aralioides HOM05D002653 ORTHO05D002623 9.2e-187 657.9 801 47.1
vmacro03486 Vaccinium macrocarpon HOM05D002653 ORTHO05D002623 3.3e-184 649.4 795 45.2
Thecc.01G150000 Theobroma cacao HOM05D002653 ORTHO05D002623 1.1e-182 644.4 783 46.1
PSO063G3289 Papaver somniferum HOM05D002653 ORTHO05D002623 3.1e-182 642.9 797 45.4
Rhsim13G0127300 Rhododendron simsii HOM05D002653 ORTHO05D002623 5.8e-181 638.6 799 44.7
Atru.chr8.1038_Atru.chr8.1039 Acer truncatum HOM05D002653 ORTHO05D002623 7.6e-181 638.3 767 46.3
Eucgr.K01355 Eucalyptus grandis HOM05D002653 ORTHO05D002623 2.9e-180 636.3 799 44.4
Gohir.A05G394600 Gossypium hirsutum HOM05D002653 ORTHO05D002623 1.9e-179 633.6 787 45.5
Gorai.012G024100 Gossypium raimondii HOM05D002653 ORTHO05D002623 2.4e-179 633.3 787 45.6
GSVIVG01019366001 Vitis vinifera HOM05D002653 ORTHO05D002623 1.6e-175 620.5 764 44.8
MBI12_g09298_MAGBIO Magnolia biondii HOM05D002653 ORTHO05D002623 1.5e-173 614.0 778 45.0
PGR044G0026 Punica granatum HOM05D002653 ORTHO05D002623 3.4e-173 612.8 783 45.2
ClCG03G010410 Citrullus lanatus HOM05D002653 ORTHO05D002623 1.7e-172 610.5 789 43.7
CsaV3_1G044330 Cucumis sativus L. HOM05D002653 ORTHO05D002623 2.9e-172 609.8 782 44.4
Lsat_1_v5_gn_8_5081 Lactuca sativa HOM05D002653 ORTHO05D002623 3.8e-172 609.4 761 44.7
Sed0003631 Sechium edule HOM05D002653 ORTHO05D002623 4.2e-171 605.9 792 44.3
MELO3C010033.2 Cucumis melo HOM05D002653 ORTHO05D002623 7.1e-171 605.1 788 43.1
Lsat_1_v5_gn_6_56501 Lactuca sativa HOM05D002653 ORTHO05D002623 1.2e-170 604.4 761 44.2
ECA233G1976 Erigeron canadensis HOM05D002653 ORTHO05D002623 3.5e-170 602.8 798 42.6
DCAR_018920 Daucus carota HOM05D002653 ORTHO05D002623 7.8e-170 601.7 785 44.7
CAN.G690.1 Capsicum annuum HOM05D002653 ORTHO05D002623 3.9e-169 599.4 792 42.0
Lj4C825G3 Lonicera japonica HOM05D002653 ORTHO05D002623 8.7e-169 598.2 778 44.7
Sopen11g020620 Solanum pennellii HOM05D002653 ORTHO05D002623 1.1e-168 597.8 792 42.9
Solyc11g045160.3 Solanum lycopersicum HOM05D002653 ORTHO05D002623 2.5e-168 596.7 792 42.6
HanXRQChr07g0186761 Helianthus annuus HOM05D002653 ORTHO05D002623 3.1e-166 589.7 768 43.6
Nitab4.5_0004202g0020 Nicotiana tabacum HOM05D002653 ORTHO05D002623 1.7e-164 583.9 791 41.7
Peaxi162Scf00126g00051 Petunia axillaris HOM05D002653 ORTHO05D002623 2.9e-164 583.2 792 42.7
Nn7g37406 Nelumbo nucifera HOM05D002653 ORTHO05D002623 3.8e-164 582.8 795 42.9
Sc15g0007450 Simmondsia chinensis HOM05D002653 ORTHO05D002623 2.1e-162 577.0 750 41.9
Cc11_g00280 Coffea canephora HOM05D002653 ORTHO05D002623 3.5e-162 576.2 803 41.6
SalBow1G2769 Salvia bowleyana HOM05D002653 ORTHO05D002623 2.5e-160 570.1 774 42.6
Aqoxy2G01525 Aquilegia oxysepala HOM05D002653 ORTHO05D002623 4.8e-159 565.8 795 42.1
Gohir.D04G020351 Gossypium hirsutum HOM05D002653 ORTHO05D002623 3.4e-157 559.7 728 45.2
Carub.0006s2259 Capsella rubella HOM05D002653 ORTHO05D002623 3.2e-155 553.1 765 41.4
Nitab4.5_0006025g0010 Nicotiana tabacum HOM05D002653 ORTHO05D002623 5.5e-155 552.4 781 40.7
Aa31LG11G3960 Aethionema arabicum HOM05D002653 ORTHO05D002623 2.7e-154 550.1 766 43.6
SalBow1G3632 Salvia bowleyana HOM05D002653 ORTHO05D002623 3.5e-154 549.7 775 42.2
THA.LOC104814962 Tarenaya hassleriana HOM05D002653 ORTHO05D002623 3.0e-153 546.6 768 41.9
AL6G36330 Arabidopsis lyrata HOM05D002653 ORTHO05D002623 2.5e-152 543.5 765 42.1
A06p35550 Brassica napus HOM05D002653 ORTHO05D002623 2.5e-152 543.5 755 42.8
C07p42990 Brassica napus HOM05D002653 ORTHO05D002623 4.3e-152 542.7 755 42.6
MSTRG.8096 Avicennia marina HOM05D002653 ORTHO05D002623 5.6e-152 542.3 765 41.8
CARHR188760 Cardamine hirsuta HOM05D002653 ORTHO05D002623 5.6e-152 542.3 772 41.7
Sp2g22690 Schrenkiella parvula HOM05D002653 ORTHO05D002623 7.4e-152 542.0 765 42.6
BcaNung01253 Brassica carinata HOM05D002653 ORTHO05D002623 1.4e-150 537.7 758 42.6
Thhalv10003500m.g Eutrema salsugineum HOM05D002653 ORTHO05D002623 2.6e-149 533.5 757 41.7
EL10Ac1g01415 Beta vulgaris HOM05D002653 ORTHO05D002623 1.0e-148 531.6 773 41.0
AT5G24740 Arabidopsis thaliana HOM05D002653 ORTHO05D002623 1.3e-148 531.2 766 41.4
BraA06t26480Z Brassica rapa HOM05D002653 ORTHO05D002623 4.2e-147 526.2 775 41.5
ATR1155G033 Amborella trichopoda HOM05D002653 ORTHO05D002623 5.5e-147 525.8 798 39.5
AUR62013467 Chenopodium quinoa HOM05D002653 ORTHO05D002623 9.3e-147 525.0 777 40.5
Migut.L00839 Erythranthe guttata HOM05D002653 ORTHO05D002623 1.6e-146 524.2 798 39.8
BolC7t44828H Brassica oleracea HOM05D002653 ORTHO05D002623 1.0e-145 521.5 775 41.2
SGA_v2.0_scaffold131G34416 Striga asiatica HOM05D002653 ORTHO05D002623 5.7e-144 515.8 796 40.3
Cpa.g.sc119.1 Carica papaya HOM05D002653 ORTHO05D002623 8.2e-135 485.3 541 47.3
Zm00001eb260890 Zea mays HOM05D002653 ORTHO05D002623 2.3e-129 467.2 781 37.4
unitig_8.g3108 Utricularia gibba HOM05D002653 ORTHO05D002623 7.4e-120 435.6 607 42.0
AUR62026805 Chenopodium quinoa HOM05D002653 ORTHO05D002623 6.3e-119 432.6 745 38.9
SEGI_36671 Sequoiadendron giganteum HOM05D002653 ORTHO05D002623 6.1e-106 389.4 786 34.5
Hma1.2p1_2738F.1_g327720 Hydrangea macrophylla HOM05D002653 ORTHO05D002623 5.5e-99 366.3 556 40.6
Mapoly0009s0011 Marchantia polymorpha HOM05D002653 ORTHO05D002623 1.4e-86 325.1 808 29.8
SMO353G0260 Selaginella moellendorffii HOM05D002653 ORTHO05D002623 1.7e-84 318.2 758 30.6
Migut.L00786 Erythranthe guttata HOM05D002653 ORTHO05D002623 6.6e-84 316.2 388 44.6
Pp3c15_25690 Physcomitrium patens HOM05D002653 ORTHO05D002623 7.8e-77 292.7 802 30.4
HPP92_001360 Vanilla planifolia HOM05D002653 ORTHO05D002623 2.4e-70 271.2 692 28.9
RcHm_v2.0_Chr5g0051461 Rosa chinensis HOM05D002653 ORTHO05D002623 7.3e-59 233.0 262 49.2
Migut.L00525 Erythranthe guttata HOM05D002653 ORTHO05D002623 3.0e-44 184.5 297 39.1
CBR_g47049 Chara braunii HOM05D002653 ORTHO05D002623 1.4e-33 149.1 495 25.9
Lsat_1_v5_gn_1_69101 Lactuca sativa HOM05D002653 ORTHO05D002623 6.3e-26 123.6 85 61.2
Cpa.g.sc119.2 Carica papaya HOM05D002653 ORTHO05D002623 1.6e-21 109.0 228 32.0
Lsat_1_v5_gn_6_118061 Lactuca sativa HOM05D002653 ORTHO05D002623 3.6e-21 107.8 105 50.5
Oeu013191.1 Olea europaea HOM05D002653 ORTHO05D002623 6.7e-20 103.6 96 51.0
HPP92_001362 Vanilla planifolia HOM05D002653 ORTHO05D002623 1.3e-18 99.4 152 38.8
QL02p032103 Quercus lobata HOM05D003355 ORTHO05D002623 9.4e-14 83.2 71 54.9
Phvul.002G234308 Phaseolus vulgaris HOM05D002653 ORTHO05D002623 2.1e-13 82.0 60 68.3
SMO302G0008 Selaginella moellendorffii HOM05D002653 ORTHO05D002623 1.0e-12 79.7 247 30.0
Lsat_1_v5_gn_6_59520 Lactuca sativa HOM05D002372 ORTHO05D002623 3.0e-12 78.2 75 52.0
Lsat_1_v5_gn_6_103800 Lactuca sativa HOM05D003170 ORTHO05D003611 3.3e-11 74.7 69 52.2
Lsat_1_v5_gn_9_71520 Lactuca sativa HOM05D002653 ORTHO05D002623 7.4e-11 73.6 50 62.0
SMO353G0198 Selaginella moellendorffii HOM05D002653 ORTHO05D002623 1.4e-09 69.3 282 28.4
QL02p009774 Quercus lobata HOM05D001890 ORTHO05D002623 2.6e-08 65.1 104 34.6
Lsat_1_v5_gn_8_138540 Lactuca sativa HOM05D002028 ORTHO05D002474 4.5e-08 64.3 60 53.3
CBR_g47048 Chara braunii HOM05D000019 ORTHO05D000353 3.2e-06 58.2 108 30.6


User provided reference genes

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