Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27145_v3 Cicer arietinum L. HOM05D004419 ORTHO05D005480 3.9e-36 154.1 68 100.0
Ca_20582_v3 Cicer arietinum L. HOM05D004419 ORTHO05D005480 1.9e-30 135.2 62 95.2
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 2.1e-29 131.7 62 91.9
Psat7g213880 Pisum sativum HOM05D004419 ORTHO05D005480 4.7e-29 130.6 62 90.3
Medtr4g066020 Medicago truncatula HOM05D004419 ORTHO05D005480 1.8e-28 128.6 62 88.7
Lj3g0003248 Lotus japonicus HOM05D004419 ORTHO05D005480 5.2e-28 127.1 62 85.5
Lalb_Chr19g0138231 Lupinus albus HOM05D004419 ORTHO05D005480 6.7e-28 126.7 62 85.5
Glyma.12G055000 Glycine max HOM05D004419 ORTHO05D005480 1.7e-26 122.1 62 82.3
Phvul.011G056900 Phaseolus vulgaris HOM05D004419 ORTHO05D005480 2.2e-26 121.7 62 80.6
arahy.Tifrunner.gnm1.ann1.LD2WL8 Arachis hypogaea HOM05D004419 ORTHO05D005480 2.8e-26 121.3 62 83.9
Glyma.11G130600 Glycine max HOM05D004419 ORTHO05D005480 2.4e-25 118.2 62 80.6
Lalb_Chr01g0003291 Lupinus albus HOM05D004419 ORTHO05D005480 4.5e-24 114.0 62 79.0
Aqoxy2G00106 Aquilegia oxysepala HOM05D004419 ORTHO05D005480 1.3e-23 112.5 62 74.2
Manes.06G168600 Manihot esculenta HOM05D004419 ORTHO05D005480 1.1e-22 109.4 62 75.8
Actinidia39384 Actinidia chinensis HOM05D004419 ORTHO05D005480 1.5e-22 109.0 62 75.8
AT3G20810 Arabidopsis thaliana HOM05D004419 ORTHO05D005480 1.5e-22 109.0 62 77.4
CSS0021936 Camellia sinensis var. sinensis HOM05D004419 ORTHO05D005480 1.9e-22 108.6 62 74.2
Gohir.A06G108900 Gossypium hirsutum HOM05D004419 ORTHO05D005480 1.9e-22 108.6 62 77.4
Gohir.D06G112900 Gossypium hirsutum HOM05D004419 ORTHO05D005480 1.9e-22 108.6 62 77.4
Gorai.010G128800 Gossypium raimondii HOM05D004419 ORTHO05D005480 1.9e-22 108.6 62 77.4
AL3G34730 Arabidopsis lyrata HOM05D004419 ORTHO05D005480 2.5e-22 108.2 62 77.4
Thecc.09G224700 Theobroma cacao HOM05D004419 ORTHO05D005480 2.5e-22 108.2 62 74.2
Nn7g36075 Nelumbo nucifera HOM05D004419 ORTHO05D005480 3.2e-22 107.8 62 74.2
Atru.chr3.2519_Atru.chr3.2520 Acer truncatum HOM05D004419 ORTHO05D005480 4.2e-22 107.5 62 75.8
Duzib150G1622 Durio zibethinus HOM05D004419 ORTHO05D005480 5.5e-22 107.1 62 72.6
Hma1.2p1_0143F.1_g064490 Hydrangea macrophylla HOM05D004419 ORTHO05D005480 7.2e-22 106.7 63 69.8
GSVIVG01025322001 Vitis vinifera HOM05D004419 ORTHO05D005480 7.2e-22 106.7 62 74.2
Haze_23052 Corylus avellana HOM05D004419 ORTHO05D005480 9.4e-22 106.3 62 72.6
Haze_23057 Corylus avellana HOM05D004419 ORTHO05D005480 9.4e-22 106.3 62 72.6
PGR119G1205 Punica granatum HOM05D004419 ORTHO05D005480 9.4e-22 106.3 65 69.2
Eucgr.J00814 Eucalyptus grandis HOM05D004419 ORTHO05D005480 2.1e-21 105.1 62 72.6
Sp3g18830 Schrenkiella parvula HOM05D004419 ORTHO05D005480 2.1e-21 105.1 62 75.8
BcaC05g28276 Brassica carinata HOM05D004419 ORTHO05D005480 2.7e-21 104.8 62 74.2
A05p27970 Brassica napus HOM05D004419 ORTHO05D005480 2.7e-21 104.8 62 74.2
C05p43260 Brassica napus HOM05D004419 ORTHO05D005480 2.7e-21 104.8 62 74.2
BolC5t33056H Brassica oleracea HOM05D004419 ORTHO05D005480 2.7e-21 104.8 62 74.2
BraA05t21680Z Brassica rapa HOM05D004419 ORTHO05D005480 2.7e-21 104.8 62 74.2
Duzib168G0032 Durio zibethinus HOM05D004419 ORTHO05D005480 2.7e-21 104.8 62 72.6
PSO384G0662 Papaver somniferum HOM05D004419 ORTHO05D005480 6.1e-21 103.6 62 67.7
CARHR096660 Cardamine hirsuta HOM05D004419 ORTHO05D005480 8.0e-21 103.2 62 74.2
CANSAT54G1224 Cannabis sativa HOM05D004419 ORTHO05D005480 1.0e-20 102.8 66 69.7
Carub.0003s2077 Capsella rubella HOM05D004419 ORTHO05D005480 1.0e-20 102.8 62 72.6
Ciclev10015488m.g Citrus clementina HOM05D004419 ORTHO05D005480 1.0e-20 102.8 62 72.6
Prupe.6G015700 Prunus persica HOM05D004419 ORTHO05D005480 1.0e-20 102.8 62 72.6
arahy.Tifrunner.gnm1.ann1.6DX332 Arachis hypogaea HOM05D004419 ORTHO05D005480 1.4e-20 102.4 53 83.0
QL01p016023 Quercus lobata HOM05D004419 ORTHO05D005480 1.8e-20 102.1 62 71.0
Cfa009704 Carpinus fangiana HOM05D004419 ORTHO05D005480 2.3e-20 101.7 62 69.4
Cc01_g04260 Coffea canephora HOM05D004419 ORTHO05D005480 3.0e-20 101.3 62 69.4
ECA233G0260 Erigeron canadensis HOM05D004419 ORTHO05D005480 3.0e-20 101.3 62 72.6
Manes.14G013900 Manihot esculenta HOM05D004419 ORTHO05D005480 3.0e-20 101.3 62 74.2
Potri.001G016200 Populus trichocarpa HOM05D004419 ORTHO05D005480 3.0e-20 101.3 62 72.6
THA.LOC104816908 Tarenaya hassleriana HOM05D004419 ORTHO05D005480 4.0e-20 100.9 62 72.6
Dinv36300 Davidia involucrata HOM05D004419 ORTHO05D005480 5.2e-20 100.5 62 69.4
Thhalv10021129m.g Eutrema salsugineum HOM05D004419 ORTHO05D005480 5.2e-20 100.5 63 74.6
MD03G1020700 Malus domestica HOM05D004419 ORTHO05D005480 5.2e-20 100.5 62 69.4
QL01p006124 Quercus lobata HOM05D004419 ORTHO05D005480 5.2e-20 100.5 62 69.4
CiPaw.13G165000 Carya illinoinensis HOM05D004419 ORTHO05D005480 6.8e-20 100.1 62 69.4
RcHm_v2.0_Chr5g0078291 Rosa chinensis HOM05D004419 ORTHO05D005480 6.8e-20 100.1 62 71.0
TAR623G0092 Trochodendron aralioides HOM05D004419 ORTHO05D005480 6.8e-20 100.1 62 66.1
HanXRQChr02g0056491 Helianthus annuus HOM05D004419 ORTHO05D005480 8.8e-20 99.8 62 71.0
TWI60G0085 Tripterygium wilfordii HOM05D004419 ORTHO05D005480 8.8e-20 99.8 62 72.6
Oeu024454.3 Olea europaea HOM05D004419 ORTHO05D005480 1.2e-19 99.4 62 71.0
FAN21G0217 Fragaria x ananassa HOM05D004419 ORTHO05D005480 1.5e-19 99.0 62 72.6
RcHm_v2.0_Chr5g0078171 Rosa chinensis HOM05D004419 ORTHO05D005480 1.5e-19 99.0 62 71.0
Aa31LG8G7630 Aethionema arabicum HOM05D004419 ORTHO05D005480 2.0e-19 98.6 62 72.6
MD11G1022000 Malus domestica HOM05D004419 ORTHO05D005480 2.0e-19 98.6 62 67.7
Cpa.g.sc84.102 Carica papaya HOM05D004419 ORTHO05D005480 2.6e-19 98.2 62 67.7
Os09g0489200 Oryza sativa ssp. japonica HOM05D004419 ORTHO05D005480 3.4e-19 97.8 62 66.1
PGSC0003DMG400021346 Solanum tuberosum HOM05D004419 ORTHO05D005480 3.4e-19 97.8 62 69.4
vmacro12711 Vaccinium macrocarpon HOM05D004419 ORTHO05D005480 3.4e-19 97.8 97 49.5
Sc16g0011690 Simmondsia chinensis HOM05D004419 ORTHO05D005480 5.7e-19 97.1 62 67.7
FvH4_3g43600 Fragaria vesca HOM05D004419 ORTHO05D005480 7.5e-19 96.7 62 71.0
FAN11G1953 Fragaria x ananassa HOM05D004419 ORTHO05D005480 7.5e-19 96.7 62 71.0
FAN25G0488 Fragaria x ananassa HOM05D004419 ORTHO05D005480 7.5e-19 96.7 62 71.0
CAN.G388.54 Capsicum annuum HOM05D004419 ORTHO05D005480 9.7e-19 96.3 62 67.7
EL10Ac4g10313 Beta vulgaris HOM05D004419 ORTHO05D005480 1.3e-18 95.9 72 62.5
FAN16G1269 Fragaria x ananassa HOM05D004419 ORTHO05D005480 1.7e-18 95.5 62 71.0
Sopen01g002670 Solanum pennellii HOM05D004419 ORTHO05D005480 1.7e-18 95.5 62 67.7
Nitab4.5_0003250g0020 Nicotiana tabacum HOM05D004419 ORTHO05D005480 3.7e-18 94.4 62 67.7
CsaV3_1G042600 Cucumis sativus L. HOM05D004419 ORTHO05D005480 6.3e-18 93.6 62 71.0
Sabra01G0011400 Salix brachista HOM05D004419 ORTHO05D005480 8.3e-18 93.2 55 72.7
SHI30509 Sapria himalayana HOM05D004419 ORTHO05D005480 1.4e-17 92.4 62 69.4
Migut.D00562 Erythranthe guttata HOM05D004419 ORTHO05D005480 2.4e-17 91.7 62 67.7
MSTRG.21407 Avicennia marina HOM05D004419 ORTHO05D005480 3.1e-17 91.3 62 67.7
Sed0001509 Sechium edule HOM05D004419 ORTHO05D005480 4.1e-17 90.9 62 67.7
MELO3C015209.2 Cucumis melo HOM05D004419 ORTHO05D005480 1.6e-16 89.0 62 69.4
MBI01_g05106_MAGBIO Magnolia biondii HOM05D004419 ORTHO05D005480 5.9e-16 87.0 94 46.8
SEGI_06744 Sequoiadendron giganteum HOM05D004419 ORTHO05D005480 5.9e-16 87.0 61 62.3
Os08g0508500 Oryza sativa ssp. japonica HOM05D004419 ORTHO05D005480 7.7e-16 86.7 62 62.9
Pp3c17_10850 Physcomitrium patens HOM05D004419 ORTHO05D005480 1.7e-15 85.5 62 59.7
ATR0605G084 Amborella trichopoda HOM05D004419 ORTHO05D005480 2.2e-15 85.1 61 62.3
HPP92_017970 Vanilla planifolia HOM05D004419 ORTHO05D005480 5.0e-15 84.0 62 62.9
BcaB06g26154 Brassica carinata HOM05D004419 ORTHO05D005480 8.5e-15 83.2 62 62.9
BcaC05g28277 Brassica carinata HOM05D004419 ORTHO05D005480 8.5e-15 83.2 62 62.9
BcaC05g28278 Brassica carinata HOM05D004419 ORTHO05D005480 8.5e-15 83.2 62 62.9
VMungo1127G0574 Vigna mungo HOM05D004419 ORTHO05D005480 2.7e-13 78.2 42 81.0
MELO3C025411.2 Cucumis melo HOM05D004419 ORTHO05D005480 6.1e-13 77.0 62 64.5
Ah.06g193530 Amaranthus hybridus HOM05D004419 ORTHO05D005480 8.0e-13 76.6 63 57.1
DCAR_002041 Daucus carota HOM05D004419 ORTHO05D005480 2.3e-12 75.1 45 68.9
Lsat_1_v5_gn_6_50061 Lactuca sativa HOM05D004419 ORTHO05D005480 2.3e-12 75.1 62 56.5
MBI01_g41296_MAGBIO Magnolia biondii HOM05D004419 ORTHO05D005480 2.3e-12 75.1 46 67.4
Solyc01g006680.4 Solanum lycopersicum HOM05D004419 ORTHO05D005480 4.0e-12 74.3 48 68.8
SMO364G0845 Selaginella moellendorffii HOM05D004419 ORTHO05D005480 5.2e-12 73.9 62 56.5
Hund22076 Selenicereus undatus HOM05D004419 ORTHO05D005480 6.8e-12 73.6 62 58.1
Mapoly0036s0149 Marchantia polymorpha HOM05D004419 ORTHO05D005480 8.8e-12 73.2 62 51.6
Ah.04g161770 Amaranthus hybridus HOM05D004419 ORTHO05D005480 3.4e-11 71.2 62 53.2
AagrBONN_evm.TU.Sc2ySwM_117.3437 Anthoceros agrestis HOM05D004419 ORTHO05D005480 3.4e-11 71.2 62 53.2
Nitab4.5_0000175g0140 Nicotiana tabacum HOM05D004419 ORTHO05D005480 4.4e-11 70.9 46 67.4
Peaxi162Scf00559g00213 Petunia axillaris HOM05D004419 ORTHO05D005480 2.8e-10 68.2 46 63.0
HanXRQChr13g0403921 Helianthus annuus HOM05D004419 ORTHO05D005480 2.4e-09 65.1 59 55.9
ClCG03G013430 Citrullus lanatus HOM05D004419 ORTHO05D005480 3.5e-08 61.2 45 66.7
FAN11G3211 Fragaria x ananassa HOM05D004419 ORTHO05D005480 1.9e-06 55.5 38 60.5
FvH4_3g43632 Fragaria vesca HOM05D004419 ORTHO05D005480 4.2e-06 54.3 36 63.9


User provided reference genes

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