Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27102_v3 Cicer arietinum L. HOM05D001296 ORTHO05D003826 1.2e-42 176.0 84 100.0
Ca_19754_v3 Cicer arietinum L. HOM05D001296 ORTHO05D003826 4.0e-38 161.0 81 93.8
Psat5g217600 Pisum sativum HOM05D001296 ORTHO05D003826 1.4e-22 109.4 76 68.4
Medtr3g018620 Medicago truncatula HOM05D001296 ORTHO05D003826 2.2e-20 102.1 76 63.2
Lj3g0017099 Lotus japonicus HOM05D001296 ORTHO05D003826 5.6e-16 87.4 64 59.4
arahy.Tifrunner.gnm1.ann1.40ITVF Arachis hypogaea HOM05D001296 ORTHO05D003826 6.8e-14 80.5 83 49.4
arahy.Tifrunner.gnm1.ann1.2M3JSP Arachis hypogaea HOM05D001296 ORTHO05D003826 8.9e-14 80.1 83 49.4
Glyma.11G154500 Glycine max HOM05D001296 ORTHO05D003826 2.6e-13 78.6 75 53.3
MD07G1036700 Malus domestica HOM05D001296 ORTHO05D003826 1.7e-12 75.9 68 51.5
Lalb_Chr04g0264031 Lupinus albus HOM05D001296 ORTHO05D003826 2.2e-12 75.5 78 50.0
GSVIVG01000665001 Vitis vinifera HOM05D001296 ORTHO05D000008 2.9e-12 75.1 67 52.2
Thecc.10G166600 Theobroma cacao HOM05D001296 ORTHO05D003826 4.9e-12 74.3 67 52.2
Actinidia02193 Actinidia chinensis HOM05D001296 ORTHO05D003826 6.4e-12 73.9 68 48.5
RcHm_v2.0_Chr1g0321951 Rosa chinensis HOM05D001296 ORTHO05D003826 6.4e-12 73.9 74 45.9
VMungo1080G0211 Vigna mungo HOM05D001296 ORTHO05D003826 6.4e-12 73.9 75 50.7
COL.COLO4_21454 Corchorus olitorius HOM05D001296 ORTHO05D003826 8.4e-12 73.6 77 48.1
Phvul.005G029700 Phaseolus vulgaris HOM05D001296 ORTHO05D003826 8.4e-12 73.6 75 53.3
Ciclev10005821m.g Citrus clementina HOM05D001296 ORTHO05D003826 1.4e-11 72.8 77 48.1
TAR633G1527 Trochodendron aralioides HOM05D001296 ORTHO05D003826 1.4e-11 72.8 72 50.0
Atru.chr12.1363 Acer truncatum HOM05D001296 ORTHO05D003826 1.9e-11 72.4 77 50.6
Prupe.2G032100 Prunus persica HOM05D001296 ORTHO05D003826 1.9e-11 72.4 74 47.3
BolC4t25376H Brassica oleracea HOM05D001296 ORTHO05D003826 2.4e-11 72.0 76 46.1
AUR62037204 Chenopodium quinoa HOM05D001296 ORTHO05D003826 2.4e-11 72.0 84 46.4
EL10Ac2g02825 Beta vulgaris HOM05D001296 ORTHO05D003826 5.4e-11 70.9 79 44.3
CANSAT64G2108 Cannabis sativa HOM05D001296 ORTHO05D003826 5.4e-11 70.9 68 47.1
Sp5g07930 Schrenkiella parvula HOM05D001296 ORTHO05D003826 5.4e-11 70.9 77 44.2
BcaB02g08445 Brassica carinata HOM05D001296 ORTHO05D003826 7.1e-11 70.5 76 46.1
Carub.0005s2111 Capsella rubella HOM05D001296 ORTHO05D003826 7.1e-11 70.5 74 45.9
Duzib114G0332 Durio zibethinus HOM05D001296 ORTHO05D003826 7.1e-11 70.5 67 49.3
Duzib114G1000 Durio zibethinus HOM05D001296 ORTHO05D003826 7.1e-11 70.5 67 49.3
FAN03G2947 Fragaria x ananassa HOM05D001296 ORTHO05D003826 7.1e-11 70.5 65 52.3
MBI11_g32500_MAGBIO Magnolia biondii HOM05D001296 ORTHO05D003826 7.1e-11 70.5 68 48.5
Potri.001G025500 Populus trichocarpa HOM05D001296 ORTHO05D003826 7.1e-11 70.5 68 48.5
vmacro07932 Vaccinium macrocarpon HOM05D001296 ORTHO05D003826 7.1e-11 70.5 64 50.0
Dinv08499 Davidia involucrata HOM05D001296 ORTHO05D003826 9.2e-11 70.1 68 48.5
Thhalv10011060m.g Eutrema salsugineum HOM05D001296 ORTHO05D003826 9.2e-11 70.1 74 48.6
RcHm_v2.0_Chr3g0472601 Rosa chinensis HOM05D001296 ORTHO05D003826 9.2e-11 70.1 63 50.8
vmacro07817 Vaccinium macrocarpon HOM05D001296 ORTHO05D003826 9.2e-11 70.1 68 50.0
Actinidia09272 Actinidia chinensis HOM05D001296 ORTHO05D003826 1.2e-10 69.7 68 50.0
AUR62026846 Chenopodium quinoa HOM05D001296 ORTHO05D003826 1.2e-10 69.7 84 45.2
FvH4_7g02710 Fragaria vesca HOM05D001296 ORTHO05D003826 1.2e-10 69.7 65 50.8
FAN06G3594 Fragaria x ananassa HOM05D001296 ORTHO05D003826 1.2e-10 69.7 65 50.8
Lj2A395G23 Lonicera japonica HOM05D001296 ORTHO05D003826 1.2e-10 69.7 68 47.1
Actinidia32316 Actinidia chinensis HOM05D001296 ORTHO05D003826 1.6e-10 69.3 68 50.0
CSS0011207 Camellia sinensis var. sinensis HOM05D001296 ORTHO05D003826 2.1e-10 68.9 68 48.5
CSS0024715 Camellia sinensis var. sinensis HOM05D001296 ORTHO05D003826 2.1e-10 68.9 68 48.5
Lj2C395G5 Lonicera japonica HOM05D001296 ORTHO05D003826 2.1e-10 68.9 68 45.6
Nn2g14902 Nelumbo nucifera HOM05D001296 ORTHO05D003826 2.1e-10 68.9 67 47.8
Hund24630 Selenicereus undatus HOM05D001296 ORTHO05D003826 2.1e-10 68.9 68 42.6
BcaC02g09065 Brassica carinata HOM05D001296 ORTHO05D003826 3.5e-10 68.2 76 44.7
C04p38030 Brassica napus HOM05D001296 ORTHO05D003826 3.5e-10 68.2 76 44.7
BraA04t16234Z Brassica rapa HOM05D001296 ORTHO05D003826 3.5e-10 68.2 76 44.7
Dinv09257 Davidia involucrata HOM05D001296 ORTHO05D003826 3.5e-10 68.2 68 48.5
Dinv09281 Davidia involucrata HOM05D001296 ORTHO05D003826 3.5e-10 68.2 68 48.5
FAN01G3004 Fragaria x ananassa HOM05D001296 ORTHO05D003826 3.5e-10 68.2 65 50.8
AT3G54490 Arabidopsis thaliana HOM05D001296 ORTHO05D003826 4.6e-10 67.8 74 45.9
HanXRQChr17g0563991 Helianthus annuus HOM05D001296 ORTHO05D003826 4.6e-10 67.8 78 47.4
AL5G35540 Arabidopsis lyrata HOM05D001296 ORTHO05D003826 6.0e-10 67.4 78 43.6
CSS0028523 Camellia sinensis var. sinensis HOM05D001296 ORTHO05D003826 6.0e-10 67.4 68 47.1
CSS0029488 Camellia sinensis var. sinensis HOM05D001296 ORTHO05D003826 6.0e-10 67.4 68 47.1
Rhsim03G0008600 Rhododendron simsii HOM05D001296 ORTHO05D003826 6.0e-10 67.4 65 46.2
Cc06_g18820 Coffea canephora HOM05D001296 ORTHO05D003826 7.8e-10 67.0 68 47.1
Sc13g0001300 Simmondsia chinensis HOM05D001296 ORTHO05D003826 7.8e-10 67.0 68 45.6
THA.LOC104824188 Tarenaya hassleriana HOM05D001296 ORTHO05D003826 7.8e-10 67.0 77 39.0
GSVIVG01033595001 Vitis vinifera HOM05D001296 ORTHO05D003826 7.8e-10 67.0 68 42.6
ECA234G3519 Erigeron canadensis HOM05D001296 ORTHO05D003826 1.0e-09 66.6 64 51.6
Eucgr.K01636 Eucalyptus grandis HOM05D001296 ORTHO05D003826 1.0e-09 66.6 68 45.6
RhsimUnG0216700 Rhododendron simsii HOM05D000657 ORTHO05D002092 1.0e-09 66.6 68 47.1
EL10Ac3g07213 Beta vulgaris HOM05D001296 ORTHO05D003826 1.3e-09 66.2 68 44.1
DCAR_020548 Daucus carota HOM05D001296 ORTHO05D003826 1.3e-09 66.2 68 45.6
CARHR164390 Cardamine hirsuta HOM05D001296 ORTHO05D003826 1.7e-09 65.9 74 45.9
A04p05340 Brassica napus HOM05D001296 ORTHO05D003826 2.3e-09 65.5 76 43.4
AUR62031991 Chenopodium quinoa HOM05D001296 ORTHO05D003826 2.3e-09 65.5 66 43.9
Atru.chr1.1488 Acer truncatum HOM05D001296 ORTHO05D003826 3.0e-09 65.1 68 45.6
TWI38G1653 Tripterygium wilfordii HOM05D001296 ORTHO05D003826 3.0e-09 65.1 75 42.7
AUR62030335 Chenopodium quinoa HOM05D001296 ORTHO05D003826 3.9e-09 64.7 66 43.9
Hma1.2p1_1251F.1_g270430 Hydrangea macrophylla HOM05D001296 ORTHO05D003826 5.1e-09 64.3 74 45.9
HPP92_023101 Vanilla planifolia HOM05D001296 ORTHO05D003826 5.1e-09 64.3 68 41.2
Lsat_1_v5_gn_4_30101 Lactuca sativa HOM05D001296 ORTHO05D003826 6.6e-09 63.9 76 42.1
Sed0018242 Sechium edule HOM05D001296 ORTHO05D003826 6.6e-09 63.9 68 41.2
CARHR167280 Cardamine hirsuta HOM05D001296 ORTHO05D003826 8.7e-09 63.5 70 42.9
RhsimUnG0219900 Rhododendron simsii HOM05D000657 ORTHO05D002092 8.7e-09 63.5 68 45.6
CAN.G134.219 Capsicum annuum HOM05D001296 ORTHO05D003826 1.1e-08 63.2 68 39.7
CAN.G1563.11 Capsicum annuum HOM05D001296 ORTHO05D003826 1.1e-08 63.2 68 41.2
Cpa.g.sc5.204 Carica papaya HOM05D001296 ORTHO05D003826 1.1e-08 63.2 68 47.1
TWI77G0613 Tripterygium wilfordii HOM05D001296 ORTHO05D003826 1.1e-08 63.2 70 45.7
Lalb_Chr22g0357351 Lupinus albus HOM05D001296 ORTHO05D003826 1.5e-08 62.8 80 40.0
Medtr3g058520 Medicago truncatula HOM05D001296 ORTHO05D003826 1.5e-08 62.8 59 55.9
RcHm_v2.0_Chr2g0125071 Rosa chinensis HOM05D001296 ORTHO05D003826 1.5e-08 62.8 68 44.1
Ciclev10021999m.g Citrus clementina HOM05D001296 ORTHO05D003826 1.9e-08 62.4 68 39.7
FAN14G4429 Fragaria x ananassa HOM05D001296 ORTHO05D003826 1.9e-08 62.4 68 44.1
Lsat_1_v5_gn_5_159481 Lactuca sativa HOM05D001296 ORTHO05D003826 1.9e-08 62.4 68 42.6
Nitab4.5_0008307g0010 Nicotiana tabacum HOM05D001296 ORTHO05D003826 1.9e-08 62.4 80 37.5
PSO339G6570 Papaver somniferum HOM05D001296 ORTHO05D003826 1.9e-08 62.4 67 43.3
PSO384G3462 Papaver somniferum HOM05D001296 ORTHO05D003826 1.9e-08 62.4 67 43.3
Sed0005510 Sechium edule HOM05D001296 ORTHO05D003826 1.9e-08 62.4 68 39.7
PGSC0003DMG402022480 Solanum tuberosum HOM05D001296 ORTHO05D003826 1.9e-08 62.4 78 35.9
ECA248G2693 Erigeron canadensis HOM05D001296 ORTHO05D003826 2.5e-08 62.0 70 41.4
HanXRQChr09g0259961 Helianthus annuus HOM05D001296 ORTHO05D003826 2.5e-08 62.0 68 42.6
Solyc01g098320.4 Solanum lycopersicum HOM05D001296 ORTHO05D003826 2.5e-08 62.0 78 35.9
Solyc04g040170.3 Solanum lycopersicum HOM05D001296 ORTHO05D003826 2.5e-08 62.0 68 38.2
Sopen01g041880 Solanum pennellii HOM05D001296 ORTHO05D003826 2.5e-08 62.0 78 35.9
Sopen04g009960 Solanum pennellii HOM05D001296 ORTHO05D003826 2.5e-08 62.0 68 38.2
PGSC0003DMG400010646 Solanum tuberosum HOM05D001296 ORTHO05D003826 2.5e-08 62.0 68 38.2
FvH4_6g25210 Fragaria vesca HOM05D001296 ORTHO05D003826 3.3e-08 61.6 68 44.1
FAN09G0772 Fragaria x ananassa HOM05D002247 ORTHO05D002659 3.3e-08 61.6 68 44.1
ATR0075G025 Amborella trichopoda HOM05D001296 ORTHO05D003826 4.3e-08 61.2 74 35.1
Cfa016691 Carpinus fangiana HOM05D001296 ORTHO05D003826 4.3e-08 61.2 65 44.6
CiPaw.09G045400 Carya illinoinensis HOM05D001296 ORTHO05D003826 4.3e-08 61.2 65 46.2
Haze_19718 Corylus avellana HOM05D001296 ORTHO05D003826 4.3e-08 61.2 65 44.6
MELO3C009776.2 Cucumis melo HOM05D001296 ORTHO05D003826 4.3e-08 61.2 68 39.7
Glyma.03G129500 Glycine max HOM05D001296 ORTHO05D003826 4.3e-08 61.2 74 37.8
Lj1g0025299 Lotus japonicus HOM05D001296 ORTHO05D003826 4.3e-08 61.2 75 38.7
Potri.016G038500 Populus trichocarpa HOM05D001296 ORTHO05D003826 4.3e-08 61.2 68 42.6
Prupe.7G043600 Prunus persica HOM05D001296 ORTHO05D003826 4.3e-08 61.2 68 42.6
THA.LOC104803274 Tarenaya hassleriana HOM05D001296 ORTHO05D003826 4.3e-08 61.2 74 41.9
CsaV3_3G040420 Cucumis sativus L. HOM05D001296 ORTHO05D003826 5.6e-08 60.8 68 38.2
Hma1.2p1_0521F.1_g171480 Hydrangea macrophylla HOM05D001296 ORTHO05D003826 5.6e-08 60.8 68 44.1
Medtr7g090220 Medicago truncatula HOM05D001296 ORTHO05D003826 5.6e-08 60.8 66 42.4
Psat3g077800 Pisum sativum HOM05D001296 ORTHO05D003826 5.6e-08 60.8 66 43.9
PGR142G0705 Punica granatum HOM05D001296 ORTHO05D003826 5.6e-08 60.8 68 44.1
Sp5g05500 Schrenkiella parvula HOM05D001296 ORTHO05D003826 5.6e-08 60.8 77 40.3
Aqoxy2G00335 Aquilegia oxysepala HOM05D001296 ORTHO05D003826 7.3e-08 60.5 70 47.1
FAN02G0156 Fragaria x ananassa HOM05D001296 ORTHO05D003826 7.3e-08 60.5 67 44.8
arahy.Tifrunner.gnm1.ann1.JAEG6E Arachis hypogaea HOM05D001296 ORTHO05D003826 9.6e-08 60.1 75 41.3
ClCG10G016030 Citrullus lanatus HOM05D001296 ORTHO05D003826 9.6e-08 60.1 68 39.7
Manes.08G057400 Manihot esculenta HOM05D001296 ORTHO05D003826 9.6e-08 60.1 68 44.1
Os11g0143400 Oryza sativa ssp. japonica HOM05D001296 ORTHO05D003826 9.6e-08 60.1 75 44.0
Os12g0139500 Oryza sativa ssp. japonica HOM05D001296 ORTHO05D003826 9.6e-08 60.1 75 44.0
arahy.Tifrunner.gnm1.ann1.3QF1KH Arachis hypogaea HOM05D001296 ORTHO05D003826 1.2e-07 59.7 75 41.3
Migut.B01217 Erythranthe guttata HOM05D001296 ORTHO05D003826 1.2e-07 59.7 77 45.5
Nitab4.5_0003134g0160 Nicotiana tabacum HOM05D001296 ORTHO05D003826 1.2e-07 59.7 80 35.0
Ah.13g076980 Amaranthus hybridus HOM05D001296 ORTHO05D003826 1.6e-07 59.3 68 36.8
MD14G1084600 Malus domestica HOM05D001296 ORTHO05D003826 1.6e-07 59.3 68 42.6
Oeu057803.2 Olea europaea HOM05D001296 ORTHO05D003826 1.6e-07 59.3 68 41.2
Peaxi162Scf00502g00082 Petunia axillaris HOM05D001296 ORTHO05D003826 1.6e-07 59.3 68 39.7
QL04p014286 Quercus lobata HOM05D001296 ORTHO05D003826 1.6e-07 59.3 75 44.0
Thecc.05G140300 Theobroma cacao HOM05D001296 ORTHO05D003826 1.6e-07 59.3 67 43.3
A09p50010 Brassica napus HOM05D001296 ORTHO05D003826 2.1e-07 58.9 82 39.0
BraA09t40451Z Brassica rapa HOM05D001296 ORTHO05D003826 2.1e-07 58.9 82 39.0
Peaxi162Scf00660g00117 Petunia axillaris HOM05D001296 ORTHO05D003826 2.1e-07 58.9 64 40.6
TPR.G9316 Trifolium pratense HOM05D001296 ORTHO05D003826 2.1e-07 58.9 75 38.7
Carub.0005s2389 Capsella rubella HOM05D001296 ORTHO05D003826 2.8e-07 58.5 76 39.5
CDE05G1541 Ceratophyllum demersum HOM05D001296 ORTHO05D003826 2.8e-07 58.5 58 51.7
Duzib128G1037 Durio zibethinus HOM05D001296 ORTHO05D003826 2.8e-07 58.5 68 41.2
Sabra16G0040300 Salix brachista HOM05D001296 ORTHO05D003826 2.8e-07 58.5 68 41.2
Sabra16G0045000 Salix brachista HOM05D001296 ORTHO05D003826 2.8e-07 58.5 68 41.2
Sabra16G0045100 Salix brachista HOM05D001296 ORTHO05D003826 2.8e-07 58.5 68 41.2
Sp4g23630 Schrenkiella parvula HOM05D001296 ORTHO05D003826 2.8e-07 58.5 67 41.8
SalBow6G2362 Salvia bowleyana HOM05D001296 ORTHO05D003826 3.6e-07 58.2 67 43.3
Ca_08405_v3 Cicer arietinum L. HOM05D001296 ORTHO05D003826 4.7e-07 57.8 59 44.1
Aa31LG10G11320 Aethionema arabicum HOM05D001296 ORTHO05D003826 6.2e-07 57.4 70 40.0
Aa31LG10G12010 Aethionema arabicum HOM05D001296 ORTHO05D003826 6.2e-07 57.4 76 38.2
BcaC07g40048 Brassica carinata HOM05D001296 ORTHO05D003826 6.2e-07 57.4 76 40.8
BcaC07g40078 Brassica carinata HOM05D001296 ORTHO05D003826 6.2e-07 57.4 76 40.8
Gohir.A09G118700 Gossypium hirsutum HOM05D001296 ORTHO05D003826 6.2e-07 57.4 67 43.3
Lalb_Chr14g0365901 Lupinus albus HOM05D001296 ORTHO05D003826 6.2e-07 57.4 76 39.5
MSTRG.6383 Avicennia marina HOM05D001296 ORTHO05D003826 8.1e-07 57.0 67 40.3
BcaC07g40024 Brassica carinata HOM05D001296 ORTHO05D003826 8.1e-07 57.0 82 37.8
C08p32420 Brassica napus HOM05D001296 ORTHO05D003826 8.1e-07 57.0 82 37.8
BolC8t50856H Brassica oleracea HOM05D001296 ORTHO05D003826 8.1e-07 57.0 82 37.8
MD00G1170800 Malus domestica HOM05D001296 ORTHO05D003826 8.1e-07 57.0 68 41.2
SGA_v2.0_scaffold105G30325 Striga asiatica HOM05D001296 ORTHO05D003826 8.1e-07 57.0 67 37.3
AL5G38570 Arabidopsis lyrata HOM05D001296 ORTHO05D003826 1.1e-06 56.6 76 38.2
CARHR136440 Cardamine hirsuta HOM05D001296 ORTHO05D003826 1.1e-06 56.6 67 38.8
VMungo1383G0914 Vigna mungo HOM05D001296 ORTHO05D003826 1.1e-06 56.6 74 36.5
Zm00001eb093130 Zea mays HOM05D001296 ORTHO05D003826 1.1e-06 56.6 66 43.9
Gohir.D09G115442 Gossypium hirsutum HOM05D001296 ORTHO05D003826 1.4e-06 56.2 67 41.8
Gorai.006G133300 Gossypium raimondii HOM05D001296 ORTHO05D003826 1.4e-06 56.2 67 41.8
QL07p008420 Quercus lobata HOM05D001296 ORTHO05D003826 1.4e-06 56.2 65 40.0
QL07p008705 Quercus lobata HOM05D001296 ORTHO05D003826 1.4e-06 56.2 65 40.0
RcHm_v2.0_Chr1g0321871 Rosa chinensis HOM05D001296 ORTHO05D003826 1.4e-06 56.2 49 53.1
SHI28263 Sapria himalayana HOM05D001296 ORTHO05D003826 2.4e-06 55.5 68 39.7
SGA_v2.0_scaffold96G28930 Striga asiatica HOM05D001296 ORTHO05D003826 2.4e-06 55.5 82 35.4
Oeu054494.1 Olea europaea HOM05D001296 ORTHO05D002609 3.1e-06 55.1 61 44.3
Oeu017863.1 Olea europaea HOM05D001296 ORTHO05D002609 4.0e-06 54.7 61 44.3
A04p31510 Brassica napus HOM05D001296 ORTHO05D003826 5.2e-06 54.3 67 35.8
BraA04t18608Z Brassica rapa HOM05D001296 ORTHO05D003826 5.2e-06 54.3 67 35.8
Thhalv10006218m.g Eutrema salsugineum HOM05D001296 ORTHO05D003826 5.2e-06 54.3 76 39.5
Duzib093G1916 Durio zibethinus HOM05D001296 ORTHO05D003826 6.9e-06 53.9 67 41.8
Manes.09G007600 Manihot esculenta HOM05D001296 ORTHO05D003826 6.9e-06 53.9 68 39.7
BcaC02g12896 Brassica carinata HOM05D001296 ORTHO05D003826 9.0e-06 53.5 67 35.8
C04p68940 Brassica napus HOM05D001296 ORTHO05D003826 9.0e-06 53.5 67 35.8
BolC4t28395H Brassica oleracea HOM05D001296 ORTHO05D003826 9.0e-06 53.5 67 35.8


User provided reference genes

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