Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 0.0e+00 1322.4 674 100.0
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 8.6e-285 983.4 602 84.4
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 1.1e-282 976.5 610 83.4
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 1.5e-273 946.0 599 80.6
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 8.4e-272 940.3 600 81.7
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 2.7e-270 935.3 600 81.5
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 1.1e-268 929.9 598 79.9
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 1.1e-268 929.9 596 82.2
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 1.6e-267 926.0 599 81.0
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 2.1e-267 925.6 599 81.0
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 2.6e-265 918.7 601 79.7
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 4.5e-265 917.9 601 78.2
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 4.2e-263 911.4 602 79.7
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 2.3e-221 772.7 444 91.2
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 2.7e-217 759.2 598 66.6
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 1.3e-216 756.9 600 69.7
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 2.9e-216 755.7 598 66.9
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 6.5e-216 754.6 599 66.4
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 4.2e-215 751.9 595 67.1
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 4.2e-215 751.9 598 65.4
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 9.4e-215 750.7 598 66.4
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 1.8e-213 746.5 599 65.6
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 4.0e-213 745.3 597 66.7
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 4.0e-213 745.3 598 65.1
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 4.4e-212 741.9 599 64.4
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 9.8e-212 740.7 603 64.8
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 2.2e-211 739.6 595 64.7
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 2.8e-211 739.2 598 65.4
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 6.3e-211 738.0 595 65.5
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 1.8e-210 736.5 594 65.7
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.2e-209 733.8 593 65.1
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 2.0e-209 733.0 597 64.5
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 7.7e-209 731.1 593 64.4
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 2.3e-208 729.6 598 64.9
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 8.6e-208 727.6 604 62.4
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 1.1e-207 727.2 596 63.4
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 1.5e-207 726.9 598 63.5
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 2.5e-207 726.1 587 63.9
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 9.5e-207 724.2 612 63.4
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 1.6e-206 723.4 592 64.2
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 1.0e-205 720.7 593 63.7
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 2.3e-205 719.5 593 63.9
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 3.4e-204 715.7 597 63.7
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 4.4e-204 715.3 620 62.9
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 5.7e-204 714.9 595 63.2
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 9.8e-204 714.1 602 63.5
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 1.3e-203 713.8 599 63.3
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 1.7e-203 713.4 577 64.8
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 3.7e-203 712.2 598 62.5
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 4.9e-203 711.8 601 63.9
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 1.1e-202 710.7 596 62.2
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 2.4e-202 709.5 595 62.7
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 3.1e-202 709.1 596 63.4
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 3.1e-202 709.1 629 61.4
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 2.7e-201 706.1 596 63.4
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 4.5e-201 705.3 621 61.4
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 7.8e-201 704.5 599 62.4
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 2.3e-200 703.0 614 61.1
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 1.1e-199 700.7 603 61.9
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 2.5e-199 699.5 594 62.6
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 3.3e-199 699.1 589 62.0
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 4.3e-199 698.7 590 62.2
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 4.3e-199 698.7 597 62.6
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 9.5e-199 697.6 589 62.3
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 2.8e-198 696.0 473 77.6
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 2.8e-198 696.0 601 61.6
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 2.8e-198 696.0 589 62.3
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 3.6e-198 695.7 590 62.0
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 4.7e-198 695.3 594 62.8
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 8.0e-198 694.5 590 61.9
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 1.4e-197 693.7 588 62.1
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 2.3e-197 693.0 593 62.7
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 6.8e-197 691.4 541 66.9
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 8.9e-197 691.0 589 61.8
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 1.2e-196 690.6 593 62.1
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 1.5e-196 690.3 595 60.7
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 2.0e-196 689.9 590 61.5
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 2.0e-196 689.9 586 62.5
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 3.4e-196 689.1 602 59.3
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 4.4e-196 688.7 597 61.0
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 2.9e-195 686.0 592 61.7
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 2.9e-195 686.0 600 61.5
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 6.4e-195 684.9 594 62.1
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 6.4e-195 684.9 616 58.4
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 8.3e-195 684.5 593 61.2
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 1.4e-194 683.7 592 60.8
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 1.9e-194 683.3 597 60.6
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 2.4e-194 682.9 593 60.5
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 3.5e-193 679.1 565 63.5
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 4.6e-193 678.7 602 61.3
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 6.0e-193 678.3 584 61.8
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 1.3e-192 677.2 605 59.7
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 3.0e-192 676.0 602 61.0
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 1.1e-191 674.1 594 61.6
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 9.5e-191 671.0 560 63.9
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 9.5e-191 671.0 589 60.3
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 1.2e-190 670.6 587 60.1
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 1.8e-189 666.8 591 58.7
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 2.3e-189 666.4 526 64.4
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 2.1e-185 653.3 590 58.5
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 7.8e-185 651.4 584 58.0
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 1.9e-183 646.7 591 59.1
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 2.5e-183 646.4 595 58.8
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 1.1e-181 641.0 613 57.1
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 1.4e-181 640.6 524 64.5
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 1.8e-181 640.2 595 57.8
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 6.8e-181 638.3 595 57.6
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 9.9e-180 634.4 596 58.6
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 7.8e-177 624.8 593 57.0
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 5.1e-176 622.1 595 56.8
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 1.5e-175 620.5 594 57.4
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 3.3e-175 619.4 596 57.4
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 4.7e-174 615.5 596 56.9
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 4.7e-174 615.5 596 56.9
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 6.8e-173 611.7 596 56.9
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 4.4e-172 609.0 593 56.3
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 2.9e-171 606.3 596 56.5
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 3.5e-169 599.4 596 55.7
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 5.1e-168 595.5 577 56.5
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 1.4e-162 577.4 594 54.0
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 2.6e-156 556.6 597 50.9
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 1.3e-155 554.3 523 60.8
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 4.9e-155 552.4 613 50.2
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 3.5e-145 519.6 610 48.4
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 7.9e-145 518.5 588 50.5
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 3.1e-133 479.9 589 47.2
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 1.3e-131 474.6 605 46.4
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 5.5e-122 442.6 432 54.9
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 2.3e-112 410.6 388 58.8
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 3.9e-112 409.8 633 39.2
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 1.7e-110 404.4 323 65.6
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 7.0e-109 399.1 455 46.8
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.1e-101 375.2 322 63.0
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 2.3e-96 357.5 611 38.8
Psat1g081880 Pisum sativum HOM05D004159 ORTHO05D019349 7.2e-90 335.9 245 70.6
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 6.1e-81 306.2 269 58.4
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 4.1e-77 293.5 351 50.4
Haze_26879 Corylus avellana HOM05D004159 ORTHO05D005858 1.1e-74 285.4 620 32.6
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 1.3e-67 261.9 489 37.0
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 2.8e-65 254.2 183 69.9
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 5.2e-64 250.0 183 78.1
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 4.6e-60 236.9 224 56.7
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 3.5e-52 210.7 136 73.5
Sc03g0007510 Simmondsia chinensis HOM05D004159 ORTHO05D005858 1.2e-47 195.7 156 62.8
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 3.6e-41 174.1 387 34.1
Ca_02925_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 9.0e-40 169.5 83 96.4
Ca_15743_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 1.5e-39 168.7 83 96.4
MD10G1043900 Malus domestica HOM05D004159 ORTHO05D036595 6.7e-35 153.3 127 62.2
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 1.1e-34 152.5 180 53.9
Hma1.2p1_0078F.1_g040075 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 4.2e-29 134.0 101 68.3
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 9.3e-29 132.9 130 58.5
Hma1.2p1_0078F.1_g040060 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.2e-28 132.5 101 67.3
Actinidia33332 Actinidia chinensis HOM05D004159 ORTHO05D002141 3.9e-27 127.5 82 75.6
Ca_09718_v3 Cicer arietinum L. HOM05D000334 ORTHO05D000200 8.2e-25 119.8 69 82.6
Gohir.D06G181800 Gossypium hirsutum HOM05D004159 ORTHO05D021100 1.8e-24 118.6 112 57.1
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 2.6e-23 114.8 209 39.7
Gorai.013G041700 Gossypium raimondii HOM05D004159 ORTHO05D005858 7.6e-23 113.2 114 54.4
Gohir.D13G037150 Gossypium hirsutum HOM05D004159 ORTHO05D021100 1.0e-22 112.8 114 54.4
Medtr6g022570 Medicago truncatula HOM05D004159 ORTHO05D005858 1.6e-20 105.5 150 46.7
RcHm_v2.0_Chr5g0047691 Rosa chinensis HOM05D004159 ORTHO05D036595 2.7e-20 104.8 82 63.4
Lj2g0001382 Lotus japonicus HOM05D004159 ORTHO05D235994 2.3e-19 101.7 56 85.7
SEGI_01298 Sequoiadendron giganteum HOM05D004159 ORTHO05D021100 8.7e-19 99.8 97 56.7
Nitab4.5_0008375g0030 Nicotiana tabacum HOM05D004159 ORTHO05D285123 4.3e-18 97.4 133 47.4
Medtr6g022550 Medicago truncatula HOM05D004159 ORTHO05D005858 1.3e-14 85.9 106 49.1
Medtr1g070970 Medicago truncatula HOM05D000334 ORTHO05D000200 3.3e-10 71.2 73 58.9
TPR.G39111 Trifolium pratense HOM05D000334 ORTHO05D000200 5.7e-10 70.5 74 59.5
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 1.8e-08 65.5 34 91.2
MD13G1107200 Malus domestica HOM05D004159 ORTHO05D021100 4.1e-08 64.3 72 54.2
Phvul.007G176100 Phaseolus vulgaris HOM05D000334 ORTHO05D000200 6.9e-08 63.5 75 48.0
VMungo0720G1624 Vigna mungo HOM05D000334 ORTHO05D000200 6.9e-08 63.5 67 53.7
Actinidia35769 Actinidia chinensis HOM05D004159 ORTHO05D021100 2.0e-07 62.0 98 46.9
Lj5g0011798 Lotus japonicus HOM05D000334 ORTHO05D000200 2.6e-07 61.6 72 50.0
Medtr7g095960 Medicago truncatula HOM05D000334 ORTHO05D000200 5.9e-07 60.5 81 50.6
Ca_15744_v3 Cicer arietinum L. HOM05D001252 ORTHO05D148191 1.3e-06 59.3 33 84.8
Psat3g060800 Pisum sativum HOM05D000334 ORTHO05D000200 1.7e-06 58.9 83 47.0


User provided reference genes

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