Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 2.6e-141 505.4 257 100.0
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 2.2e-119 432.6 236 91.5
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 1.1e-115 420.2 243 86.8
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 2.1e-114 416.0 243 87.7
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 8.8e-113 410.6 236 88.1
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 1.5e-112 409.8 236 87.7
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 2.6e-112 409.1 243 83.5
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 1.3e-111 406.8 243 83.1
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 1.4e-110 403.3 259 81.9
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 1.2e-109 400.2 234 85.9
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 7.7e-109 397.5 239 81.6
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 2.8e-90 335.9 231 70.1
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 6.2e-90 334.7 236 69.5
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 8.0e-90 334.3 201 84.1
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 4.0e-89 332.0 250 67.6
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 5.2e-89 331.6 218 71.6
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 6.8e-89 331.3 232 70.3
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 6.8e-89 331.3 226 71.2
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 2.0e-88 329.7 232 69.8
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 3.4e-88 328.9 240 67.5
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 3.4e-88 328.9 233 67.8
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 5.8e-88 328.2 233 67.8
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 5.8e-88 328.2 238 68.1
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 5.8e-88 328.2 233 68.2
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 5.8e-88 328.2 233 71.2
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 1.7e-87 326.6 236 71.2
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 1.7e-87 326.6 235 68.5
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 2.9e-87 325.9 224 68.3
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 4.9e-87 325.1 222 71.2
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 1.1e-86 323.9 235 68.1
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 1.4e-86 323.6 224 69.2
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 1.4e-86 323.6 225 70.2
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 2.4e-86 322.8 228 67.1
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 2.4e-86 322.8 220 71.4
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 4.1e-86 322.0 238 68.5
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 9.2e-86 320.9 225 68.9
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 9.2e-86 320.9 225 68.9
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 9.2e-86 320.9 235 66.4
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 2.7e-85 319.3 221 68.8
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 2.7e-85 319.3 227 66.5
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 3.5e-85 318.9 221 68.8
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 1.7e-84 316.6 221 68.3
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 3.0e-84 315.8 218 68.3
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 6.6e-84 314.7 223 68.2
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 3.3e-83 312.4 221 70.1
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 5.6e-83 311.6 221 67.4
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 7.3e-83 311.2 221 68.3
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 2.1e-82 309.7 241 63.5
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 1.4e-81 307.0 222 67.1
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 1.8e-81 306.6 250 62.8
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 2.3e-81 306.2 232 63.8
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 2.3e-81 306.2 219 70.3
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 2.0e-80 303.1 233 63.1
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 2.0e-80 303.1 229 65.1
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 2.6e-80 302.8 221 67.4
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 3.4e-80 302.4 221 66.5
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 9.8e-80 300.8 221 67.9
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 9.8e-80 300.8 233 62.7
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 1.7e-79 300.1 221 65.2
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 4.9e-79 298.5 220 66.8
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 6.4e-79 298.1 225 66.2
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 6.4e-79 298.1 221 67.0
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 8.3e-79 297.7 233 61.8
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 1.1e-78 297.4 241 61.8
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 1.1e-78 297.4 233 63.1
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 1.9e-78 296.6 221 65.6
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 4.1e-78 295.4 221 63.8
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 1.2e-77 293.9 232 65.1
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 2.1e-77 293.1 221 65.2
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 1.7e-76 290.0 235 63.0
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 5.1e-76 288.5 272 57.4
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 1.9e-75 286.6 240 60.8
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 4.3e-75 285.4 218 65.1
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 7.3e-75 284.6 283 55.5
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 1.6e-74 283.5 241 60.2
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 2.1e-74 283.1 223 64.6
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 4.7e-74 282.0 218 63.8
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 4.7e-74 282.0 241 59.8
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 8.1e-74 281.2 230 62.2
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 2.3e-73 279.6 229 59.4
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 8.9e-73 277.7 229 59.4
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 3.4e-72 275.8 206 66.5
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 5.8e-72 275.0 243 62.6
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 4.9e-71 271.9 228 60.5
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 4.9e-71 271.9 244 60.7
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 6.4e-71 271.6 230 61.3
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 6.4e-71 271.6 230 61.3
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 2.4e-70 269.6 226 62.4
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 1.2e-69 267.3 248 56.5
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 2.7e-69 266.2 234 60.3
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 4.6e-69 265.4 221 62.4
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 1.3e-68 263.8 154 83.8
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 6.6e-68 261.5 221 61.5
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 1.5e-67 260.4 188 65.4
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 1.5e-67 260.4 225 57.3
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 5.6e-67 258.5 210 63.3
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 6.2e-66 255.0 225 61.8
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.1e-65 254.2 225 61.3
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 3.4e-64 249.2 178 68.5
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 4.9e-63 245.4 215 62.8
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 3.5e-61 239.2 240 53.8
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 1.1e-59 234.2 275 48.7
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 1.1e-57 227.6 194 59.8
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 2.9e-55 219.5 279 45.9
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 8.4e-55 218.0 146 67.8
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 6.0e-53 211.8 182 58.8
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 1.9e-51 206.8 185 62.2
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 1.9e-51 206.8 152 64.5
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 4.3e-51 205.7 158 66.5
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 1.8e-49 200.3 120 85.0
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 5.3e-41 172.2 163 57.1
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 2.6e-40 169.9 170 52.9
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 1.3e-39 167.5 118 68.6
AL1G24230 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 3.5e-37 159.5 132 62.9
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 6.7e-36 155.2 121 62.8
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 2.2e-31 140.2 213 36.6
Lalb_Chr01g0000761 Lupinus albus HOM05D006697 ORTHO05D008161 6.3e-26 122.1 76 82.9
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 1.8e-25 120.6 209 31.6
arahy.Tifrunner.gnm1.ann1.D8HQTE Arachis hypogaea HOM05D006697 ORTHO05D008161 2.7e-21 106.7 70 68.6
Medtr2g451120 Medicago truncatula HOM05D006697 ORTHO05D008161 1.7e-18 97.4 95 58.9
RcHm_v2.0_Chr6g0275321 Rosa chinensis HOM05D006697 ORTHO05D008161 5.3e-17 92.4 106 47.2


User provided reference genes

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