Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 9.1e-170 600.1 299 100.0
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 2.0e-156 555.8 299 92.0
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 4.1e-154 548.1 300 92.0
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 4.7e-150 534.6 299 89.0
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 8.3e-147 523.9 301 87.0
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 2.0e-145 519.2 298 85.2
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 1.0e-144 516.9 301 87.0
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 2.3e-144 515.8 298 84.2
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 1.5e-143 513.1 300 85.0
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 2.4e-138 495.7 300 82.0
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 4.1e-138 495.0 300 82.7
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 2.7e-137 492.3 301 82.1
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 4.6e-137 491.5 299 80.9
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 4.6e-137 491.5 299 81.3
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 6.0e-137 491.1 299 81.3
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 6.6e-136 487.6 299 80.3
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 1.9e-135 486.1 303 80.9
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 3.3e-135 485.3 310 79.4
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 4.3e-135 485.0 301 79.4
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 4.3e-135 485.0 299 80.3
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 1.6e-134 483.0 302 79.8
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 2.1e-134 482.6 301 78.7
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 2.8e-134 482.3 299 78.3
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 6.2e-134 481.1 299 79.6
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 1.4e-133 479.9 299 78.9
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 1.8e-133 479.6 299 78.3
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 2.4e-133 479.2 293 80.9
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 4.0e-133 478.4 300 79.0
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 1.2e-132 476.9 301 78.7
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 2.0e-132 476.1 299 79.3
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 2.0e-132 476.1 300 78.3
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 2.6e-132 475.7 301 78.4
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 4.4e-132 474.9 299 77.9
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 7.6e-132 474.2 301 78.1
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 1.7e-131 473.0 299 78.6
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 1.7e-131 473.0 299 77.9
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 2.2e-131 472.6 301 77.7
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 3.8e-131 471.9 299 76.9
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 3.8e-131 471.9 293 77.8
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 4.9e-131 471.5 301 76.4
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 8.4e-131 470.7 300 76.7
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 2.4e-130 469.2 301 76.7
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 3.2e-130 468.8 299 77.6
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 4.1e-130 468.4 300 76.7
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 5.4e-130 468.0 299 77.3
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 5.4e-130 468.0 270 87.8
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 9.2e-130 467.2 302 76.2
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 2.7e-129 465.7 331 71.9
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 2.7e-129 465.7 299 75.6
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 2.7e-129 465.7 299 75.9
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 6.0e-129 464.5 299 75.6
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 7.8e-129 464.2 300 75.3
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 7.8e-129 464.2 300 76.3
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 1.3e-128 463.4 299 76.6
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 1.3e-128 463.4 299 76.3
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 1.7e-128 463.0 303 76.6
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 3.0e-128 462.2 303 76.9
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 5.1e-128 461.5 299 75.6
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 5.1e-128 461.5 299 75.9
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 1.1e-127 460.3 299 74.6
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 1.9e-127 459.5 300 76.0
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 1.9e-127 459.5 303 75.2
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 1.2e-126 456.8 332 70.8
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 2.8e-126 455.7 299 75.6
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 3.6e-126 455.3 299 74.2
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 3.1e-125 452.2 289 75.8
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 4.0e-125 451.8 299 74.6
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 6.9e-125 451.1 299 72.6
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 1.2e-124 450.3 282 79.1
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 2.6e-124 449.1 299 73.2
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 3.4e-124 448.7 299 71.6
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 5.8e-124 448.0 291 74.9
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 5.8e-124 448.0 284 76.8
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 7.6e-124 447.6 291 74.9
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 7.6e-124 447.6 291 74.9
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 7.6e-124 447.6 291 74.9
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 9.9e-124 447.2 291 74.6
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 1.3e-123 446.8 291 74.6
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 2.2e-123 446.0 299 71.9
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 3.8e-123 445.3 334 68.6
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 4.2e-122 441.8 298 73.2
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 1.7e-120 436.4 296 73.6
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 1.6e-118 429.9 249 82.7
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 8.1e-118 427.6 239 84.1
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 2.4e-117 426.0 312 69.9
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 3.1e-117 425.6 299 72.9
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 2.2e-115 419.5 293 69.3
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 6.4e-115 417.9 280 73.6
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 5.4e-114 414.8 269 78.1
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 6.0e-113 411.4 238 86.1
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 8.7e-112 407.5 237 80.2
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 1.9e-111 406.4 296 68.9
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 3.3e-111 405.6 292 69.5
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 1.2e-108 397.1 241 78.8
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 2.4e-106 389.4 222 82.9
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 5.5e-106 388.3 269 71.7
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 6.0e-105 384.8 250 76.8
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 8.5e-91 337.8 287 57.5
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 3.6e-89 332.4 295 55.3
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 1.8e-88 330.1 288 55.9
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 5.3e-85 318.5 418 47.8
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 6.7e-80 301.6 209 69.9
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 9.7e-79 297.7 283 61.8
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 5.5e-66 255.4 153 85.0
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 6.1e-65 251.9 273 50.2
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 4.1e-61 239.2 259 56.4
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 3.6e-57 226.1 117 88.9
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 2.2e-54 216.9 291 39.9
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 3.7e-54 216.1 245 46.1
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 5.0e-51 205.7 117 83.8
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 2.8e-46 189.9 189 52.9
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 3.7e-46 189.5 186 58.6
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 2.0e-39 167.2 175 53.7
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 3.5e-36 156.4 236 40.3
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 4.3e-34 149.4 107 67.3
Psat0s449g0080 Pisum sativum HOM05D000909 ORTHO05D000928 2.6e-31 140.2 73 90.4
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 7.3e-26 122.1 82 76.8
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 2.1e-20 104.0 52 92.3
Psat4g071240 Pisum sativum HOM05D005598 ORTHO05D006587 5.1e-19 99.4 203 35.0
Psat5g185320 Pisum sativum HOM05D000559 ORTHO05D006587 1.5e-18 97.8 52 86.5
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 1.2e-17 94.7 60 76.7
Psat5g299440 Pisum sativum HOM05D005598 ORTHO05D006587 1.4e-16 91.3 109 47.7
SEGI_12669 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 1.2e-15 88.2 54 74.1
Lalb_Chr21g0309161 Lupinus albus HOM05D005598 ORTHO05D006587 3.4e-15 86.7 60 80.0
MBI01_g19134_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 1.4e-13 81.3 44 84.1
Lalb_Chr21g0309141 Lupinus albus HOM05D005598 ORTHO05D006587 2.4e-13 80.5 54 75.9
Sabra10G0187600 Salix brachista HOM05D005598 ORTHO05D006587 1.6e-12 77.8 59 61.0
Psat6g121040 Pisum sativum HOM05D005598 ORTHO05D324080 4.8e-09 66.2 291 26.8
Cre13.g561900 Chlamydomonas reinhardtii HOM05D016613 ORTHO05D014817 6.2e-09 65.9 169 29.6
Psat6g162040 Pisum sativum HOM05D005598 ORTHO05D006587 1.4e-08 64.7 61 62.3
Pp3c2_19600 Physcomitrium patens HOM05D016613 ORTHO05D014817 1.8e-08 64.3 164 31.7
Mapoly0023s0164 Marchantia polymorpha HOM05D016613 ORTHO05D014817 3.1e-08 63.5 181 31.5
MCO01G455 Micromonas commoda HOM05D016613 ORTHO05D014817 1.5e-07 61.2 164 29.9
Psat7g021760 Pisum sativum HOM05D000559 ORTHO05D000596 1.5e-07 61.2 28 96.4
ClCG05G021840 Citrullus lanatus HOM05D005598 ORTHO05D006587 2.0e-07 60.8 89 46.1
SMO118G0286 Selaginella moellendorffii HOM05D016613 ORTHO05D014817 5.8e-07 59.3 165 27.3
PRCOL_00000730 Prasinoderma coloniale HOM05D016613 ORTHO05D014817 9.9e-07 58.5 170 29.4
BolC8t51460H Brassica oleracea HOM05D005598 ORTHO05D041141 4.9e-06 56.2 42 66.7
Psat0s447g0040 Pisum sativum HOM05D005598 ORTHO05D322697 8.4e-06 55.5 123 35.8


User provided reference genes

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