Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25015_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 5.8e-47 190.7 103 100.0
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 4.3e-26 121.3 89 79.8
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 1.2e-25 119.8 89 76.4
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 3.6e-25 118.2 90 76.7
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 4.0e-24 114.8 90 72.2
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 6.8e-24 114.0 88 75.0
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 1.5e-23 112.8 88 72.7
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 1.5e-23 112.8 88 72.7
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 1.5e-23 112.8 89 74.2
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 2.0e-23 112.5 89 73.0
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 2.0e-23 112.5 90 71.1
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 2.6e-23 112.1 89 70.8
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 3.4e-23 111.7 90 70.0
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 4.4e-23 111.3 89 70.8
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 5.8e-23 110.9 89 70.8
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 5.8e-23 110.9 88 72.7
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 5.8e-23 110.9 89 74.2
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 7.6e-23 110.5 88 70.5
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 7.6e-23 110.5 89 70.8
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 2.2e-22 109.0 89 70.8
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 3.8e-22 108.2 88 70.5
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 6.4e-22 107.5 89 69.7
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 8.4e-22 107.1 88 69.3
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 8.4e-22 107.1 89 70.8
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 8.4e-22 107.1 89 69.7
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 1.1e-21 106.7 93 65.6
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 1.1e-21 106.7 93 65.6
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.1e-21 106.7 88 69.3
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 1.4e-21 106.3 89 67.4
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 1.4e-21 106.3 89 67.4
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 1.4e-21 106.3 89 68.5
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 1.9e-21 105.9 89 68.5
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 1.9e-21 105.9 89 70.8
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 2.4e-21 105.5 88 69.3
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 2.4e-21 105.5 89 68.5
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 3.2e-21 105.1 89 69.7
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 4.2e-21 104.8 89 68.5
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 4.2e-21 104.8 89 70.8
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 5.4e-21 104.4 88 68.2
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 7.1e-21 104.0 89 73.0
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 7.1e-21 104.0 89 73.0
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 9.2e-21 103.6 89 68.5
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 9.2e-21 103.6 89 66.3
Ca_25011_v3 Cicer arietinum L. HOM05D010632 ORTHO05D000013 1.6e-20 102.8 97 70.1
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 6.0e-20 100.9 108 56.5
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 7.8e-20 100.5 89 66.3
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 1.7e-19 99.4 89 65.2
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 3.0e-19 98.6 90 66.7
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 3.0e-19 98.6 89 65.2
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 5.1e-19 97.8 89 64.0
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 6.6e-19 97.4 99 58.6
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 8.7e-19 97.1 60 93.3
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 8.7e-19 97.1 60 93.3
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 1.5e-18 96.3 89 65.2
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 2.5e-18 95.5 60 91.7
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 3.3e-18 95.1 89 64.0
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 3.3e-18 95.1 89 65.2
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 5.6e-18 94.4 61 88.5
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 5.6e-18 94.4 61 88.5
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 5.6e-18 94.4 61 88.5
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 7.3e-18 94.0 89 65.2
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 7.3e-18 94.0 88 65.9
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 7.3e-18 94.0 89 65.2
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 9.6e-18 93.6 61 88.5
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 9.6e-18 93.6 90 64.4
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 1.3e-17 93.2 62 85.5
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 2.1e-17 92.4 62 87.1
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 2.8e-17 92.0 60 86.7
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 2.8e-17 92.0 63 82.5
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 6.2e-17 90.9 61 83.6
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 6.2e-17 90.9 59 88.1
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 6.2e-17 90.9 59 88.1
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 6.2e-17 90.9 89 64.0
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 8.1e-17 90.5 59 88.1
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 1.4e-16 89.7 61 83.6
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.8e-16 89.4 59 86.4
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 1.8e-16 89.4 62 80.6
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 2.4e-16 89.0 63 79.4
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 2.4e-16 89.0 57 87.7
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 4.0e-16 88.2 61 83.6
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 5.3e-16 87.8 61 82.0
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 5.3e-16 87.8 55 90.9
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 6.9e-16 87.4 56 89.3
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 9.0e-16 87.0 89 62.9
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 9.0e-16 87.0 89 62.9
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 1.2e-15 86.7 58 84.5
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.2e-15 86.7 89 59.6
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.5e-15 86.3 59 83.1
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 1.5e-15 86.3 61 80.3
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 1.5e-15 86.3 89 61.8
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 2.0e-15 85.9 90 60.0
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 2.0e-15 85.9 89 59.6
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 2.6e-15 85.5 89 55.1
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 2.6e-15 85.5 54 90.7
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 2.6e-15 85.5 88 60.2
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 3.4e-15 85.1 88 59.1
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 3.4e-15 85.1 88 59.1
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 3.4e-15 85.1 89 55.1
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 5.8e-15 84.3 57 82.5
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 7.6e-15 84.0 57 84.2
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 7.6e-15 84.0 55 87.3
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 7.6e-15 84.0 57 86.0
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 9.9e-15 83.6 55 85.5
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 1.3e-14 83.2 89 57.3
Thecc.08G046800 Theobroma cacao HOM05D003521 ORTHO05D000476 1.7e-14 82.8 79 65.8
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 1.4e-13 79.7 52 86.5
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 5.4e-13 77.8 89 52.8
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 9.3e-13 77.0 89 58.4
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 1.2e-12 76.6 52 82.7
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 1.2e-12 76.6 62 75.8
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 1.2e-12 76.6 89 55.1
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 2.1e-12 75.9 89 56.2
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 2.1e-12 75.9 101 46.5
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 2.1e-12 75.9 52 80.8
Ca_01143_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 2.7e-12 75.5 46 93.5
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 3.5e-12 75.1 52 82.7
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 7.8e-12 73.9 53 81.1
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 3.9e-11 71.6 51 78.4
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 3.9e-11 71.6 62 71.0
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 5.1e-11 71.2 50 78.0
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 4.3e-10 68.2 51 70.6
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 1.6e-09 66.2 89 46.1
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 3.6e-09 65.1 59 69.5
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 1.1e-08 63.5 89 47.2
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 3.1e-08 62.0 59 66.1
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 3.1e-08 62.0 62 62.9
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 2.6e-07 58.9 61 62.3
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 2.2e-06 55.8 52 67.3
HanXRQChr07g0187491 Helianthus annuus HOM05D003521 ORTHO05D000476 4.9e-06 54.7 47 63.8
CARHR212390 Cardamine hirsuta HOM05D003521 ORTHO05D000476 8.4e-06 53.9 46 67.4


User provided reference genes

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