Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23943_v3 Cicer arietinum L. HOM05D003406 ORTHO05D004026 1.2e-254 883.2 650 100.0
Medtr8g038550 Medicago truncatula HOM05D003406 ORTHO05D004026 3.6e-211 738.8 649 89.4
Glyma.13G198200 Glycine max HOM05D003406 ORTHO05D004026 1.9e-204 716.5 644 89.0
Lalb_Chr01g0007801 Lupinus albus HOM05D003406 ORTHO05D004026 5.5e-204 714.9 650 86.6
Phvul.011G207400 Phaseolus vulgaris HOM05D003406 ORTHO05D004026 4.1e-199 698.7 645 87.1
Lalb_Chr19g0132381 Lupinus albus HOM05D003406 ORTHO05D004026 3.7e-192 675.6 676 81.7
VMungo1127G0085 Vigna mungo HOM05D003406 ORTHO05D004026 8.6e-189 664.5 679 65.7
Psat4g192120 Pisum sativum HOM05D003406 ORTHO05D004026 8.6e-181 637.9 540 95.0
Glyma.15G236500 Glycine max HOM05D003406 ORTHO05D004026 3.1e-178 629.4 644 84.3
arahy.Tifrunner.gnm1.ann1.07MYST Arachis hypogaea HOM05D003406 ORTHO05D004026 2.1e-174 616.7 653 75.2
CiPaw.13G012800 Carya illinoinensis HOM05D003406 ORTHO05D004026 4.9e-168 595.5 676 79.1
QL04p014603 Quercus lobata HOM05D003406 ORTHO05D004026 1.4e-167 594.0 674 78.5
QL04p014965 Quercus lobata HOM05D003406 ORTHO05D004026 1.6e-166 590.5 674 78.2
Cfa010885 Carpinus fangiana HOM05D003406 ORTHO05D004026 2.3e-165 586.6 654 82.0
Lj3g0018542 Lotus japonicus HOM05D003406 ORTHO05D004026 5.1e-165 585.5 584 84.8
Gohir.A10G183800 Gossypium hirsutum HOM05D003406 ORTHO05D004026 1.2e-163 580.9 672 78.6
arahy.Tifrunner.gnm1.ann1.P8HZNX Arachis hypogaea HOM05D003406 ORTHO05D004026 4.7e-163 578.9 668 78.7
CANSAT25G0328 Cannabis sativa HOM05D003406 ORTHO05D004026 5.2e-162 575.5 649 78.6
Ciclev10004445m.g Citrus clementina HOM05D003406 ORTHO05D004026 1.2e-161 574.3 662 78.5
Gorai.011G213900 Gossypium raimondii HOM05D003406 ORTHO05D004026 2.0e-161 573.5 672 77.2
Duzib106G0689 Durio zibethinus HOM05D003406 ORTHO05D004026 5.4e-159 565.5 662 77.3
Haze_03074 Corylus avellana HOM05D003406 ORTHO05D004026 9.2e-159 564.7 628 81.2
Thecc.10G162300 Theobroma cacao HOM05D003406 ORTHO05D004026 2.7e-158 563.1 673 75.9
Gohir.D10G190800 Gossypium hirsutum HOM05D003406 ORTHO05D004026 6.0e-158 562.0 672 76.6
CsaV3_5G024420 Cucumis sativus L. HOM05D003406 ORTHO05D004026 1.0e-157 561.2 676 76.6
Dinv32032 Davidia involucrata HOM05D003406 ORTHO05D004026 1.0e-157 561.2 689 76.8
TWI63G0701 Tripterygium wilfordii HOM05D003406 ORTHO05D004026 1.0e-157 561.2 668 77.1
Potri.003G197900 Populus trichocarpa HOM05D003406 ORTHO05D004026 1.2e-155 554.3 660 77.4
MELO3C005161.2 Cucumis melo HOM05D003406 ORTHO05D004026 1.6e-155 553.9 673 75.6
Prupe.2G034300 Prunus persica HOM05D003406 ORTHO05D004026 3.6e-155 552.7 668 75.7
Duzib114G0281 Durio zibethinus HOM05D003406 ORTHO05D004026 1.5e-153 547.4 651 69.7
Dinv09276 Davidia involucrata HOM05D003406 ORTHO05D004026 5.8e-153 545.4 675 56.3
Actinidia06245 Actinidia chinensis HOM05D003406 ORTHO05D004026 2.9e-152 543.1 677 75.6
Sed0018149 Sechium edule HOM05D003406 ORTHO05D004026 1.6e-150 537.3 669 76.5
Atru.chr12.1360 Acer truncatum HOM05D003406 ORTHO05D004026 2.7e-150 536.6 669 75.9
MD07G1038200 Malus domestica HOM05D003406 ORTHO05D004026 3.5e-150 536.2 666 75.8
Potri.T125206 Populus trichocarpa HOM05D003406 ORTHO05D004026 3.5e-150 536.2 660 76.2
GSVIVG01013527001 Vitis vinifera HOM05D003406 ORTHO05D004026 2.3e-149 533.5 658 76.6
Potri.001G026800 Populus trichocarpa HOM05D003406 ORTHO05D004026 1.1e-148 531.2 682 74.0
CiPaw.14G007200 Carya illinoinensis HOM05D003406 ORTHO05D004026 9.0e-146 521.5 684 73.2
Eucgr.G03238 Eucalyptus grandis HOM05D003406 ORTHO05D004026 2.0e-145 520.4 672 74.6
Hund13347 Selenicereus undatus HOM05D003406 ORTHO05D004026 2.6e-145 520.0 644 75.0
Manes.11G004700 Manihot esculenta HOM05D003406 ORTHO05D004026 7.6e-145 518.5 667 75.4
Manes.04G160100 Manihot esculenta HOM05D003406 ORTHO05D004026 1.7e-144 517.3 637 76.5
MD02G1288700 Malus domestica HOM05D003406 ORTHO05D004026 3.8e-144 516.2 673 64.5
FAN03G3378 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.2e-143 513.1 664 74.1
FvH4_7g02880 Fragaria vesca HOM05D003406 ORTHO05D004026 9.3e-143 511.5 665 74.7
Aqoxy4G02704 Aquilegia oxysepala HOM05D003406 ORTHO05D004026 1.6e-142 510.8 683 71.0
Cc00_g06910 Coffea canephora HOM05D003406 ORTHO05D004026 3.5e-142 509.6 668 74.9
TPR.G36971 Trifolium pratense HOM05D003406 ORTHO05D004026 6.0e-142 508.8 398 69.6
RcHm_v2.0_Chr1g0323831 Rosa chinensis HOM05D003406 ORTHO05D004026 3.9e-141 506.1 664 74.5
Nn7g36639 Nelumbo nucifera HOM05D003406 ORTHO05D004026 1.1e-140 504.6 701 69.5
TAR369G0157 Trochodendron aralioides HOM05D003406 ORTHO05D004026 1.9e-140 503.8 667 72.6
CSS0014544 Camellia sinensis var. sinensis HOM05D003406 ORTHO05D004026 5.6e-140 502.3 683 75.0
ClCG01G007460 Citrullus lanatus HOM05D003406 ORTHO05D004026 7.4e-140 501.9 767 57.8
THA.LOC104826724 Tarenaya hassleriana HOM05D003406 ORTHO05D004026 1.3e-139 501.1 659 73.3
PGR031G1802 Punica granatum HOM05D003406 ORTHO05D004026 1.6e-139 500.7 659 74.2
Sc14g0005750 Simmondsia chinensis HOM05D003406 ORTHO05D004026 3.7e-139 499.6 675 73.2
FAN06G4607 Fragaria x ananassa HOM05D003406 ORTHO05D004026 4.0e-138 496.1 715 57.5
ECA248G2072 Erigeron canadensis HOM05D003406 ORTHO05D004026 4.9e-136 489.2 674 72.6
EL10Ac2g02817 Beta vulgaris HOM05D003406 ORTHO05D004026 4.2e-135 486.1 665 71.4
MSTRG.16987 Avicennia marina HOM05D003406 ORTHO05D004026 2.3e-133 480.3 672 72.8
THA.LOC104819128 Tarenaya hassleriana HOM05D003406 ORTHO05D004026 3.3e-132 476.5 646 73.2
PSO561G0002 Papaver somniferum HOM05D003406 ORTHO05D004026 4.3e-132 476.1 684 69.9
SalBow5G3900 Salvia bowleyana HOM05D003406 ORTHO05D004026 5.8e-129 465.7 659 72.5
SalBow5G0382 Salvia bowleyana HOM05D003406 ORTHO05D004026 1.4e-127 461.1 659 72.5
PSO063G0746 Papaver somniferum HOM05D003406 ORTHO05D004026 4.2e-127 459.5 680 70.4
Rhsim07G0066700 Rhododendron simsii HOM05D003406 ORTHO05D004026 1.9e-124 450.7 801 48.2
AUR62026878 Chenopodium quinoa HOM05D003406 ORTHO05D004026 2.4e-122 443.7 674 68.2
Nitab4.5_0001669g0120 Nicotiana tabacum HOM05D003406 ORTHO05D004026 8.5e-120 435.3 677 59.2
HPP92_025009 Vanilla planifolia HOM05D003406 ORTHO05D004026 1.1e-119 434.9 682 67.7
Sabra01G0019600 Salix brachista HOM05D003406 ORTHO05D004026 9.4e-119 431.8 689 47.5
Zm00001eb140970 Zea mays HOM05D003406 ORTHO05D004026 9.4e-119 431.8 654 69.4
BcaB01g05356 Brassica carinata HOM05D003406 ORTHO05D004026 2.7e-118 430.3 636 71.4
Actinidia10165 Actinidia chinensis HOM05D003406 ORTHO05D004026 6.1e-118 429.1 659 44.9
Migut.B01223 Erythranthe guttata HOM05D003406 ORTHO05D004026 6.7e-117 425.6 658 69.5
Lsat_1_v5_gn_1_115021 Lactuca sativa HOM05D003406 ORTHO05D004026 5.7e-116 422.5 650 69.4
Lj7A583T43 Lonicera japonica HOM05D003406 ORTHO05D004026 9.7e-116 421.8 609 71.4
A03p06010 Brassica napus HOM05D003406 ORTHO05D004026 8.2e-115 418.7 646 71.4
AUR62037187 Chenopodium quinoa HOM05D003406 ORTHO05D004026 1.1e-114 418.3 663 63.8
SGA_v2.0_scaffold124G33625 Striga asiatica HOM05D003406 ORTHO05D004026 9.1e-114 415.2 517 69.4
Sabra03G0147300 Salix brachista HOM05D003406 ORTHO05D004026 1.2e-113 414.8 717 67.8
Nitab4.5_0000151g0240 Nicotiana tabacum HOM05D003406 ORTHO05D004026 2.0e-113 414.1 677 57.3
Peaxi162Scf00341g00714 Petunia axillaris HOM05D003406 ORTHO05D004026 2.0e-113 414.1 671 53.5
BraA03t09938Z Brassica rapa HOM05D003406 ORTHO05D004026 8.5e-112 408.7 669 68.2
HanXRQChr01g0004511 Helianthus annuus HOM05D003406 ORTHO05D004026 1.1e-111 408.3 644 70.3
HanXRQChr15g0463071 Helianthus annuus HOM05D003406 ORTHO05D004026 3.2e-111 406.8 646 70.9
Sp6g30540 Schrenkiella parvula HOM05D003406 ORTHO05D004026 5.5e-111 406.0 643 69.4
C03p07050 Brassica napus HOM05D003406 ORTHO05D004026 7.2e-111 405.6 642 70.6
AT5G13480 Arabidopsis thaliana HOM05D003406 ORTHO05D004026 3.0e-109 400.2 630 70.8
vmacro13749 Vaccinium macrocarpon HOM05D003406 ORTHO05D004026 3.9e-109 399.8 798 47.5
BolC3t13203H Brassica oleracea HOM05D003406 ORTHO05D004026 5.1e-109 399.4 655 59.2
Carub.0006s1164 Capsella rubella HOM05D003406 ORTHO05D004026 5.1e-109 399.4 652 69.2
Thhalv10012890m.g Eutrema salsugineum HOM05D003406 ORTHO05D004026 2.8e-107 393.7 667 67.2
ATR0745G072 Amborella trichopoda HOM05D003406 ORTHO05D004026 3.7e-107 393.3 671 65.1
Sopen08g020990 Solanum pennellii HOM05D003406 ORTHO05D004026 4.1e-106 389.8 651 66.8
Solyc08g067040.4 Solanum lycopersicum HOM05D003406 ORTHO05D004026 5.3e-106 389.4 652 66.7
AL6G24100 Arabidopsis lyrata HOM05D003406 ORTHO05D004026 1.2e-105 388.3 642 69.0
Aa31LG11G7380 Aethionema arabicum HOM05D003406 ORTHO05D004026 5.9e-105 386.0 659 68.9
A02p01970 Brassica napus HOM05D003406 ORTHO05D004026 2.2e-104 384.0 642 69.2
BraA02t05170Z Brassica rapa HOM05D003406 ORTHO05D004026 9.4e-103 378.6 658 67.6
BolC2t06560H Brassica oleracea HOM05D003406 ORTHO05D004026 1.6e-102 377.9 647 70.0
BcaNung01149 Brassica carinata HOM05D003406 ORTHO05D004026 8.0e-102 375.6 647 69.9
BcaNung01887 Brassica carinata HOM05D003406 ORTHO05D004026 2.3e-101 374.0 644 67.7
C02p06160 Brassica napus HOM05D003406 ORTHO05D004026 1.3e-96 358.2 614 70.8
MBI02_g23406_MAGBIO Magnolia biondii HOM05D003406 ORTHO05D004026 6.1e-86 322.8 373 53.1
AUR62037192 Chenopodium quinoa HOM05D003406 ORTHO05D004026 2.8e-83 313.9 339 54.3
Mapoly0029s0111 Marchantia polymorpha HOM05D003406 ORTHO05D004026 2.9e-80 303.9 427 81.3
Hma1.2p1_1396F.1_g280640 Hydrangea macrophylla HOM05D003406 ORTHO05D004026 2.9e-75 287.3 356 77.8
CDE04G3459 Ceratophyllum demersum HOM05D003406 ORTHO05D004026 6.3e-75 286.2 379 48.3
SMO353G0072 Selaginella moellendorffii HOM05D003406 ORTHO05D004026 1.7e-72 278.1 422 78.2
PSO782G3285 Papaver somniferum HOM05D003406 ORTHO05D004026 8.6e-72 275.8 593 51.4
SHI03990 Sapria himalayana HOM05D003406 ORTHO05D004026 9.5e-71 272.3 348 47.1
RcHm_v2.0_Chr5g0010661 Rosa chinensis HOM05D003406 ORTHO05D004026 2.4e-66 257.7 433 77.1
Pp3c16_16500 Physcomitrium patens HOM05D003406 ORTHO05D004026 5.0e-64 250.0 526 66.2
CARHR199960 Cardamine hirsuta HOM05D003406 ORTHO05D004026 1.1e-63 248.8 354 48.6
unitig_26.g9605 Utricularia gibba HOM05D003406 ORTHO05D004026 3.1e-61 240.7 417 43.4
CBR_g22487 Chara braunii HOM05D003406 ORTHO05D004026 4.4e-60 236.9 543 63.9
CBR_g16799 Chara braunii HOM05D003406 ORTHO05D004026 9.8e-60 235.7 537 64.4
DCAR_031832 Daucus carota HOM05D003406 ORTHO05D004026 3.5e-57 227.3 133 82.0
FAN28G2604 Fragaria x ananassa HOM05D003406 ORTHO05D004026 7.3e-55 219.5 426 74.6
FAN19G0629 Fragaria x ananassa HOM05D003406 ORTHO05D004026 9.5e-55 219.2 424 75.2
Ah.10g030390 Amaranthus hybridus HOM05D003406 ORTHO05D004026 6.2e-54 216.5 141 75.9
AagrBONN_evm.TU.Sc2ySwM_369.461 Anthoceros agrestis HOM05D003406 ORTHO05D004026 3.1e-53 214.2 465 41.7
FAN26G1924 Fragaria x ananassa HOM05D003406 ORTHO05D004026 5.2e-53 213.4 424 69.3
DCAR_031833 Daucus carota HOM05D003406 ORTHO05D004026 2.0e-52 211.5 282 52.5
SEGI_13935 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 3.7e-51 207.2 129 76.0
Aqoxy2G01593 Aquilegia oxysepala HOM05D003406 ORTHO05D004026 1.1e-47 195.7 374 35.8
ATR0568G096 Amborella trichopoda HOM05D003406 ORTHO05D004026 1.1e-37 162.5 201 48.8
TPR.G36904 Trifolium pratense HOM05D003406 ORTHO05D004026 3.1e-37 161.0 78 96.2
SHI03989 Sapria himalayana HOM05D003406 ORTHO05D004026 4.0e-37 160.6 115 67.8
TPR.G24634 Trifolium pratense HOM05D003406 ORTHO05D004026 2.0e-36 158.3 79 93.7
MCO04G412 Micromonas commoda HOM05D003406 ORTHO05D004026 3.2e-34 151.0 365 45.2
RcHm_v2.0_Chr3g0482981 Rosa chinensis HOM05D003406 ORTHO05D004026 2.7e-33 147.9 382 74.6
RcHm_v2.0_Chr3g0482821 Rosa chinensis HOM05D003406 ORTHO05D004026 1.3e-32 145.6 375 74.7
PSO561G0005 Papaver somniferum HOM05D003406 ORTHO05D004026 5.6e-31 140.2 207 48.8
RcHm_v2.0_Chr4g0404661 Rosa chinensis HOM05D003406 ORTHO05D004026 7.3e-31 139.8 414 57.5
FAN23G2061 Fragaria x ananassa HOM05D003406 ORTHO05D004026 9.6e-31 139.4 131 54.2
Os01g0951000 Oryza sativa ssp. japonica HOM05D003406 ORTHO05D004026 3.1e-29 134.4 91 69.2
PSO782G3453 Papaver somniferum HOM05D003406 ORTHO05D004026 9.0e-29 132.9 264 42.8
RcHm_v2.0_Chr3g0486211 Rosa chinensis HOM05D003406 ORTHO05D004026 1.4e-26 125.6 135 49.6
FvH4_6g22190 Fragaria vesca HOM05D003406 ORTHO05D004026 2.4e-26 124.8 137 47.4
FAN09G0535 Fragaria x ananassa HOM05D003406 ORTHO05D004026 9.3e-26 122.9 137 46.7
FAN14G5538 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.2e-25 122.5 137 46.7
FAN13G0969 Fragaria x ananassa HOM05D003406 ORTHO05D004026 2.7e-25 121.3 132 46.2
PRCOL_00004312 Prasinoderma coloniale HOM05D003406 ORTHO05D004026 6.0e-25 120.2 367 44.1
FAN18G4486 Fragaria x ananassa HOM05D003406 ORTHO05D004026 2.3e-24 118.2 137 46.7
FvH4_5g25490 Fragaria vesca HOM05D003406 ORTHO05D004026 1.1e-23 115.9 137 46.0
FvH4_5g25550 Fragaria vesca HOM05D003406 ORTHO05D004026 1.1e-23 115.9 137 46.0
PGSC0003DMG400023151 Solanum tuberosum HOM05D003406 ORTHO05D004026 1.5e-23 115.5 252 40.1
SEGI_30282 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 1.9e-23 115.2 89 57.3
SMO231G0014 Selaginella moellendorffii HOM05D003406 ORTHO05D004026 3.3e-23 114.4 108 52.8
Actinidia10171 Actinidia chinensis HOM05D003406 ORTHO05D004026 7.4e-23 113.2 122 61.5
SEGI_28183 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 2.8e-22 111.3 164 47.6
SEGI_35311 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 4.0e-21 107.5 337 34.7
Haze_26561 Corylus avellana HOM05D003406 ORTHO05D004026 1.0e-19 102.8 298 36.2
Cre06.g251951 Chlamydomonas reinhardtii HOM05D003406 ORTHO05D004026 4.9e-19 100.5 370 30.5
Actinidia13019 Actinidia chinensis HOM05D003406 ORTHO05D004026 2.5e-18 98.2 157 48.4
TPR.G20465 Trifolium pratense HOM05D003406 ORTHO05D004026 5.5e-18 97.1 55 90.9
arahy.Tifrunner.gnm1.ann1.JYS69T Arachis hypogaea HOM05D003406 ORTHO05D004026 9.3e-18 96.3 105 71.4
Actinidia19465 Actinidia chinensis HOM05D003406 ORTHO05D004026 1.6e-17 95.5 228 43.9
SEGI_34701 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 3.5e-17 94.4 53 69.8
SEGI_28398 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 3.9e-16 90.9 62 64.5
BcaC05g28071 Brassica carinata HOM05D003406 ORTHO05D004026 3.3e-15 87.8 56 75.0
C07p49630 Brassica napus HOM05D003406 ORTHO05D004026 4.1e-13 80.9 92 50.0
FAN06G0645 Fragaria x ananassa HOM05D003406 ORTHO05D004026 6.9e-13 80.1 54 63.0
FAN09G3514 Fragaria x ananassa HOM05D003406 ORTHO05D004026 6.9e-13 80.1 54 63.0
FAN11G1841 Fragaria x ananassa HOM05D003406 ORTHO05D004026 6.9e-13 80.1 54 63.0
FAN16G0070 Fragaria x ananassa HOM05D003406 ORTHO05D004026 6.9e-13 80.1 54 63.0
FAN16G0123 Fragaria x ananassa HOM05D003406 ORTHO05D004026 6.9e-13 80.1 54 63.0
FAN23G2758 Fragaria x ananassa HOM05D003406 ORTHO05D004026 6.9e-13 80.1 54 63.0
FAN27G1752 Fragaria x ananassa HOM05D003406 ORTHO05D004026 6.9e-13 80.1 54 63.0
FAN19G1643 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.5e-12 79.0 54 61.1
C03p43350 Brassica napus HOM05D003406 ORTHO05D004026 4.5e-12 77.4 47 78.7
BolC3t16605H Brassica oleracea HOM05D003406 ORTHO05D004026 4.5e-12 77.4 47 78.7
AUR62037193 Chenopodium quinoa HOM05D003406 ORTHO05D015410 1.3e-11 75.9 152 30.9
Hma1.2p1_1396F.1_g280660 Hydrangea macrophylla HOM05D003406 ORTHO05D004026 1.9e-10 72.0 110 48.2
Gohir.D10G058700 Gossypium hirsutum HOM05D003406 ORTHO05D004026 3.2e-10 71.2 51 72.5
Gorai.011G062800 Gossypium raimondii HOM05D003406 ORTHO05D004026 3.2e-10 71.2 51 70.6
FAN14G3483 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.2e-09 69.3 96 51.0
FAN11G4032 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.6e-09 68.9 74 58.1
Aa31LG8G12390 Aethionema arabicum HOM05D003406 ORTHO05D030983 5.1e-08 63.9 71 43.7
Aqoxy2G01592 Aquilegia oxysepala HOM05D003406 ORTHO05D004026 1.5e-07 62.4 137 37.2
FAN19G2649 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.9e-07 62.0 38 68.4
C05p40950 Brassica napus HOM05D003406 ORTHO05D004026 1.3e-06 59.3 39 69.2


User provided reference genes

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