Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23283_v3 Cicer arietinum L. HOM05D005962 ORTHO05D007325 3.4e-138 495.0 247 100.0
Psat4g195960 Pisum sativum HOM05D005962 ORTHO05D007325 1.3e-121 439.9 253 88.1
Medtr8g015230 Medicago truncatula HOM05D005962 ORTHO05D007325 1.2e-119 433.3 253 86.6
VMungo0331G0822 Vigna mungo HOM05D005962 ORTHO05D007325 3.8e-113 411.8 251 84.1
Glyma.08G199200 Glycine max HOM05D005962 ORTHO05D007325 6.1e-111 404.4 251 82.9
Lj3g0005277 Lotus japonicus HOM05D005962 ORTHO05D007325 1.0e-110 403.7 253 83.0
Phvul.010G143300 Phaseolus vulgaris HOM05D005962 ORTHO05D007325 3.0e-110 402.1 251 83.3
TAR623G1297 Trochodendron aralioides HOM05D005962 ORTHO05D007325 4.7e-103 378.3 251 75.7
Gohir.D01G215700 Gossypium hirsutum HOM05D005962 ORTHO05D007325 3.0e-102 375.6 251 76.9
Gorai.002G261900 Gossypium raimondii HOM05D005962 ORTHO05D007325 5.2e-102 374.8 237 80.2
CANSAT21G1984 Cannabis sativa HOM05D005962 ORTHO05D007325 5.7e-101 371.3 257 75.5
Nn4g25123 Nelumbo nucifera HOM05D005962 ORTHO05D007325 1.3e-100 370.2 250 74.8
Haze_15888 Corylus avellana HOM05D005962 ORTHO05D007325 2.2e-100 369.4 253 74.7
COL.COLO4_30547 Corchorus olitorius HOM05D005962 ORTHO05D007325 3.7e-100 368.6 241 76.8
CiPaw.02G144100 Carya illinoinensis HOM05D005962 ORTHO05D007325 4.8e-100 368.2 246 77.2
Thecc.06G103400 Theobroma cacao HOM05D005962 ORTHO05D007325 6.3e-100 367.9 252 75.0
Ciclev10026335m.g Citrus clementina HOM05D005962 ORTHO05D007325 1.4e-99 366.7 255 73.7
CsaV3_3G023410 Cucumis sativus L. HOM05D005962 ORTHO05D007325 4.1e-99 365.2 253 75.9
arahy.Tifrunner.gnm1.ann1.FEFU12 Arachis hypogaea HOM05D005962 ORTHO05D007325 1.2e-98 363.6 252 74.2
Atru.chr12.732 Acer truncatum HOM05D005962 ORTHO05D007325 2.6e-98 362.5 250 74.0
Manes.11G030300 Manihot esculenta HOM05D005962 ORTHO05D007325 3.5e-98 362.1 254 73.6
Gohir.D10G065400 Gossypium hirsutum HOM05D005962 ORTHO05D007325 5.9e-98 361.3 252 74.6
Gohir.A10G063800 Gossypium hirsutum HOM05D005962 ORTHO05D007325 7.7e-98 360.9 252 73.8
Gorai.011G069400 Gossypium raimondii HOM05D005962 ORTHO05D007325 7.7e-98 360.9 237 77.6
Duzib192G0276 Durio zibethinus HOM05D005962 ORTHO05D007325 1.0e-97 360.5 252 73.0
Lalb_Chr01g0013231 Lupinus albus HOM05D005962 ORTHO05D007325 1.7e-97 359.8 254 72.8
Sabra17G0126400 Salix brachista HOM05D005962 ORTHO05D007325 1.7e-97 359.8 243 75.3
arahy.Tifrunner.gnm1.ann1.M52QXX Arachis hypogaea HOM05D005962 ORTHO05D007325 3.8e-97 358.6 233 77.7
ClCG07G013490 Citrullus lanatus HOM05D005962 ORTHO05D007325 6.5e-97 357.8 254 75.2
Prupe.3G054900 Prunus persica HOM05D005962 ORTHO05D007325 6.5e-97 357.8 255 74.1
Manes.04G136400 Manihot esculenta HOM05D005962 ORTHO05D007325 1.1e-96 357.1 254 73.6
GSVIVG01016927001 Vitis vinifera HOM05D005962 ORTHO05D007325 2.5e-96 355.9 231 77.9
TWI12G1051 Tripterygium wilfordii HOM05D005962 ORTHO05D007325 5.5e-96 354.8 252 73.4
Sed0025844 Sechium edule HOM05D005962 ORTHO05D007325 9.4e-96 354.0 252 74.2
MBI01_g35895_MAGBIO Magnolia biondii HOM05D005962 ORTHO05D007325 2.7e-95 352.4 251 71.3
QL08p056642 Quercus lobata HOM05D005962 ORTHO05D007325 2.7e-95 352.4 242 74.4
Cc00_g23930 Coffea canephora HOM05D005962 ORTHO05D007325 6.1e-95 351.3 253 72.3
MELO3C013015.2 Cucumis melo HOM05D005962 ORTHO05D007325 8.0e-95 350.9 281 68.7
Rhsim08G0229500 Rhododendron simsii HOM05D005962 ORTHO05D007325 8.0e-95 350.9 251 73.3
Solyc12g044640.2 Solanum lycopersicum HOM05D005962 ORTHO05D007325 8.0e-95 350.9 252 72.6
Actinidia32123 Actinidia chinensis HOM05D005962 ORTHO05D007325 2.3e-94 349.4 252 71.8
DCAR_007600 Daucus carota HOM05D005962 ORTHO05D007325 2.3e-94 349.4 253 72.3
Eucgr.J02602 Eucalyptus grandis HOM05D005962 ORTHO05D007325 5.2e-94 348.2 261 70.9
Sc19g0007830 Simmondsia chinensis HOM05D005962 ORTHO05D007325 5.2e-94 348.2 251 70.9
Aqoxy2G04031 Aquilegia oxysepala HOM05D005962 ORTHO05D007325 2.0e-93 346.3 235 76.2
vmacro18833 Vaccinium macrocarpon HOM05D005962 ORTHO05D007325 2.0e-93 346.3 234 75.2
CSS0027495 Camellia sinensis var. sinensis HOM05D005962 ORTHO05D007325 3.4e-93 345.5 229 76.0
EL10Ac3g07358 Beta vulgaris HOM05D005962 ORTHO05D007325 4.4e-93 345.1 240 72.5
Lsat_1_v5_gn_5_181040 Lactuca sativa HOM05D005962 ORTHO05D007325 5.7e-93 344.7 245 72.2
Oeu024256.1 Olea europaea HOM05D005962 ORTHO05D007325 9.8e-93 344.0 256 71.5
Peaxi162Scf00038g01151 Petunia axillaris HOM05D005962 ORTHO05D007325 2.2e-92 342.8 244 71.7
CAN.G1143.30 Capsicum annuum HOM05D005962 ORTHO05D007325 2.8e-92 342.4 233 74.7
ECA248G1573 Erigeron canadensis HOM05D005962 ORTHO05D007325 4.8e-92 341.7 242 73.1
PGSC0003DMG400026839 Solanum tuberosum HOM05D005962 ORTHO05D007325 4.8e-92 341.7 252 72.2
MSTRG.11013 Avicennia marina HOM05D005962 ORTHO05D007325 6.3e-92 341.3 257 71.2
AUR62020986 Chenopodium quinoa HOM05D005962 ORTHO05D007325 1.1e-91 340.5 251 70.5
PGSC0003DMG401002516 Solanum tuberosum HOM05D005962 ORTHO05D007325 2.4e-91 339.3 243 72.0
Rhsim08G0229700 Rhododendron simsii HOM05D005962 ORTHO05D007325 1.2e-90 337.0 264 68.6
Sopen12g023060 Solanum pennellii HOM05D005962 ORTHO05D007325 1.6e-90 336.7 252 70.6
Nitab4.5_0002423g0030 Nicotiana tabacum HOM05D005962 ORTHO05D007325 4.5e-90 335.1 251 71.7
PSO210G0258 Papaver somniferum HOM05D005962 ORTHO05D007325 4.5e-90 335.1 253 68.4
Nitab4.5_0001172g0180 Nicotiana tabacum HOM05D005962 ORTHO05D007325 2.9e-89 332.4 252 70.2
Migut.I00971 Erythranthe guttata HOM05D005962 ORTHO05D007325 6.5e-89 331.3 233 74.2
PGR102G2175 Punica granatum HOM05D005962 ORTHO05D007325 8.5e-89 330.9 253 68.8
FvH4_6g32730 Fragaria vesca HOM05D005962 ORTHO05D007325 1.1e-88 330.5 255 68.2
PSO210G7608 Papaver somniferum HOM05D005962 ORTHO05D007325 1.1e-88 330.5 253 67.6
Sopen03g040020 Solanum pennellii HOM05D005962 ORTHO05D007325 1.1e-88 330.5 243 71.6
FAN05G1114 Fragaria x ananassa HOM05D005962 ORTHO05D007325 1.9e-88 329.7 255 67.8
SalBow6G5073 Salvia bowleyana HOM05D005962 ORTHO05D007325 1.9e-88 329.7 232 71.6
HanXRQChr15g0489361 Helianthus annuus HOM05D005962 ORTHO05D007325 3.2e-88 328.9 249 71.5
Hma1.2p1_0764F.1_g214960 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 4.2e-88 328.6 255 68.6
Hma1.2p1_2308F.1_g319480 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 9.4e-88 327.4 255 68.6
AUR62018448 Chenopodium quinoa HOM05D005962 ORTHO05D007325 1.6e-87 326.6 251 68.1
FAN02G1749 Fragaria x ananassa HOM05D005962 ORTHO05D007325 1.0e-86 323.9 255 66.7
RcHm_v2.0_Chr2g0141751 Rosa chinensis HOM05D005962 ORTHO05D007325 1.8e-86 323.2 255 67.1
HPP92_007682 Vanilla planifolia HOM05D005962 ORTHO05D007325 1.8e-86 323.2 234 70.5
Os06g0217500 Oryza sativa ssp. japonica HOM05D005962 ORTHO05D007325 2.2e-84 316.2 235 69.4
FAN09G1055 Fragaria x ananassa HOM05D005962 ORTHO05D007325 2.8e-84 315.8 255 65.1
unitig_32.g10986 Utricularia gibba HOM05D005962 ORTHO05D007325 8.3e-84 314.3 261 64.4
Dinv37956 Davidia involucrata HOM05D005962 ORTHO05D007325 3.1e-83 312.4 218 72.9
Aa31LG8G8050 Aethionema arabicum HOM05D005962 ORTHO05D007325 4.1e-83 312.0 237 69.6
TPR.G39766 Trifolium pratense HOM05D005962 ORTHO05D007325 2.9e-81 305.8 189 84.7
SHI11207 Sapria himalayana HOM05D005962 ORTHO05D007325 8.6e-81 304.3 242 66.5
Zm00001eb372970 Zea mays HOM05D005962 ORTHO05D007325 2.5e-80 302.8 243 65.0
Sp3g19410 Schrenkiella parvula HOM05D005962 ORTHO05D007325 5.5e-80 301.6 240 67.5
AL3G35400 Arabidopsis lyrata HOM05D005962 ORTHO05D007325 6.1e-79 298.1 240 67.1
Carub.0003s2138 Capsella rubella HOM05D005962 ORTHO05D007325 1.4e-78 297.0 240 66.7
THA.LOC104805924 Tarenaya hassleriana HOM05D005962 ORTHO05D007325 4.0e-78 295.4 259 65.3
Gohir.A01G226000 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.2e-77 293.9 183 80.9
Solyc03g121210.4 Solanum lycopersicum HOM05D005962 ORTHO05D007325 1.2e-77 293.9 221 69.2
BcaB06g26231 Brassica carinata HOM05D005962 ORTHO05D007325 4.9e-76 288.5 240 65.0
CARHR097270 Cardamine hirsuta HOM05D005962 ORTHO05D007325 4.9e-76 288.5 240 65.4
SGA_v2.0_scaffold45G16998 Striga asiatica HOM05D005962 ORTHO05D007325 1.4e-75 287.0 206 72.8
BcaC05g28175 Brassica carinata HOM05D005962 ORTHO05D007325 1.8e-75 286.6 241 65.1
Thhalv10021373m.g Eutrema salsugineum HOM05D005962 ORTHO05D007325 1.8e-75 286.6 240 64.6
BraA05t21615Z Brassica rapa HOM05D005962 ORTHO05D007325 5.4e-75 285.0 247 63.2
AT3G21350 Arabidopsis thaliana HOM05D005962 ORTHO05D007325 1.2e-74 283.9 240 65.8
A05p27250 Brassica napus HOM05D005962 ORTHO05D007325 1.2e-74 283.9 240 63.8
C05p42110 Brassica napus HOM05D005962 ORTHO05D007325 1.2e-74 283.9 240 64.2
BolC5t32941H Brassica oleracea HOM05D005962 ORTHO05D007325 1.4e-70 270.4 274 56.2
Cpa.g.sc131.1 Carica papaya HOM05D005962 ORTHO05D007325 8.6e-65 251.1 154 77.9
ATR0705G221 Amborella trichopoda HOM05D005962 ORTHO05D007325 2.5e-64 249.6 158 77.8
Cfa019373 Carpinus fangiana HOM05D005962 ORTHO05D007325 5.2e-62 241.9 175 72.6
Pp3c11_22580 Physcomitrium patens HOM05D005962 ORTHO05D007325 2.9e-60 236.1 249 53.8
Ah.04g150140 Amaranthus hybridus HOM05D005962 ORTHO05D007325 4.9e-60 235.3 156 73.7
Migut.I00969 Erythranthe guttata HOM05D005962 ORTHO05D007325 6.4e-60 235.0 139 80.6
Migut.O00801 Erythranthe guttata HOM05D005962 ORTHO05D007325 6.4e-60 235.0 139 80.6
AagrBONN_evm.TU.Sc2ySwM_362.1658 Anthoceros agrestis HOM05D005962 ORTHO05D007325 2.1e-58 229.9 198 60.1
Mapoly0012s0176 Marchantia polymorpha HOM05D005962 ORTHO05D007325 3.3e-56 222.6 256 50.8
Lj5A50T68 Lonicera japonica HOM05D005962 ORTHO05D007325 7.3e-56 221.5 175 66.9
SMO143G0120 Selaginella moellendorffii HOM05D005962 ORTHO05D007325 1.8e-54 216.9 193 58.0
MD14G1079700 Malus domestica HOM05D005962 ORTHO05D007325 1.3e-52 210.7 179 64.2
CBR_g22489 Chara braunii HOM05D005962 ORTHO05D007325 1.7e-41 173.7 245 44.1
Medtr0361s0030 Medicago truncatula HOM05D005962 ORTHO05D007325 1.3e-39 167.5 107 83.2
Lj3g0016976 Lotus japonicus HOM05D005962 ORTHO05D007325 7.1e-35 151.8 194 53.1
Lj5C50T14 Lonicera japonica HOM05D005962 ORTHO05D007325 4.2e-27 125.9 60 90.0
Cfa019374 Carpinus fangiana HOM05D005962 ORTHO05D007325 2.7e-26 123.2 69 82.6
Ah.04g150130 Amaranthus hybridus HOM05D000535 ORTHO05D000427 5.6e-24 115.5 97 63.9
Lsat_1_v5_gn_2_99820 Lactuca sativa HOM05D005962 ORTHO05D007325 9.6e-24 114.8 87 65.5
TAR624G0741 Trochodendron aralioides HOM05D005962 ORTHO05D007325 3.7e-23 112.8 120 55.8
QL05p018100 Quercus lobata HOM05D005962 ORTHO05D007325 4.8e-23 112.5 97 64.9
Dinv30416 Davidia involucrata HOM05D005962 ORTHO05D007325 6.2e-23 112.1 202 40.1
SEGI_18792 Sequoiadendron giganteum HOM05D005962 ORTHO05D007325 1.4e-22 110.9 80 66.2
RcHm_v2.0_Chr5g0064381 Rosa chinensis HOM05D005962 ORTHO05D007325 7.1e-19 98.6 83 56.6
Nitab4.5_0008212g0010 Nicotiana tabacum HOM05D005962 ORTHO05D007325 5.1e-17 92.4 195 38.5
TAR623G1541 Trochodendron aralioides HOM05D005962 ORTHO05D007325 2.8e-15 86.7 52 76.9
PRCOL_00006676 Prasinoderma coloniale HOM05D001184 ORTHO05D008450 8.2e-15 85.1 146 36.3
Zm00001eb084330 Zea mays HOM05D005962 ORTHO05D007325 3.1e-14 83.2 53 73.6
Cpa.g.c26718.1 Carica papaya HOM05D005962 ORTHO05D007325 6.9e-14 82.0 54 77.8
Zm00001eb192830 Zea mays HOM05D005962 ORTHO05D007325 4.5e-13 79.3 62 59.7
Pp3c7_2870 Physcomitrium patens HOM05D005962 ORTHO05D007325 5.9e-13 79.0 226 33.2
TAR636G3265 Trochodendron aralioides HOM05D005962 ORTHO05D007325 2.2e-12 77.0 49 73.5
Dinv30417 Davidia involucrata HOM05D000106 ORTHO05D000160 7.9e-10 68.6 60 63.3


User provided reference genes

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