Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22543_v3 Cicer arietinum L. HOM05D002170 ORTHO05D005003 6.2e-32 140.2 72 100.0
Medtr8g070490 Medicago truncatula HOM05D002170 ORTHO05D005003 8.1e-32 139.8 71 100.0
Psat1g044520 Pisum sativum HOM05D002170 ORTHO05D005003 8.1e-32 139.8 71 100.0
TPR.G6144 Trifolium pratense HOM05D002170 ORTHO05D005003 8.1e-32 139.8 71 100.0
Lalb_Chr09g0334601 Lupinus albus HOM05D002170 ORTHO05D005003 9.0e-31 136.3 71 97.2
Potri.006G265700 Populus trichocarpa HOM05D002170 ORTHO05D005003 2.6e-30 134.8 71 95.8
Glyma.08G265300 Glycine max HOM05D002170 ORTHO05D005003 3.4e-30 134.4 71 95.8
Glyma.16G095600 Glycine max HOM05D002170 ORTHO05D005003 3.4e-30 134.4 71 95.8
Lj4g0016988 Lotus japonicus HOM05D002170 ORTHO05D005003 7.6e-30 133.3 71 95.8
Phvul.003G275100 Phaseolus vulgaris HOM05D002170 ORTHO05D005003 7.6e-30 133.3 71 94.4
Sabra18G0020600 Salix brachista HOM05D002170 ORTHO05D005003 7.6e-30 133.3 71 94.4
VMungo0251G1008 Vigna mungo HOM05D002170 ORTHO05D005003 7.6e-30 133.3 71 94.4
arahy.Tifrunner.gnm1.ann1.B0P3FA Arachis hypogaea HOM05D002170 ORTHO05D005003 1.0e-29 132.9 71 94.4
arahy.Tifrunner.gnm1.ann1.Q77VDD Arachis hypogaea HOM05D002170 ORTHO05D005003 1.0e-29 132.9 71 94.4
PGR044G1237 Punica granatum HOM05D002170 ORTHO05D005003 1.0e-29 132.9 71 94.4
MD08G1054700 Malus domestica HOM05D002170 ORTHO05D005003 1.3e-29 132.5 71 94.4
Lj7A736G82 Lonicera japonica HOM05D002170 ORTHO05D005003 1.7e-29 132.1 71 94.4
Nn8g40047 Nelumbo nucifera HOM05D002170 ORTHO05D005003 1.7e-29 132.1 71 93.0
Potri.018G017200 Populus trichocarpa HOM05D002170 ORTHO05D005003 1.7e-29 132.1 71 94.4
GSVIVG01035985001 Vitis vinifera HOM05D002170 ORTHO05D005003 2.2e-29 131.7 71 93.0
Cpa.g.sc148.25 Carica papaya HOM05D002170 ORTHO05D005003 2.9e-29 131.3 71 93.0
MD15G1042300 Malus domestica HOM05D002170 ORTHO05D005003 3.8e-29 131.0 71 93.0
TAR636G2364 Trochodendron aralioides HOM05D002170 ORTHO05D005003 3.8e-29 131.0 71 91.5
TWI63G1817 Tripterygium wilfordii HOM05D002170 ORTHO05D005003 4.9e-29 130.6 71 93.0
TWI32G0518 Tripterygium wilfordii HOM05D002170 ORTHO05D005003 6.5e-29 130.2 71 91.5
DCAR_004512 Daucus carota HOM05D002170 ORTHO05D005003 8.4e-29 129.8 71 93.0
PSO063G0760 Papaver somniferum HOM05D002170 ORTHO05D005003 1.1e-28 129.4 71 90.1
PSO782G3858 Papaver somniferum HOM05D002170 ORTHO05D005003 1.1e-28 129.4 71 90.1
Duzib187G0716 Durio zibethinus HOM05D002170 ORTHO05D005003 1.9e-28 128.6 71 91.5
Eucgr.C04040 Eucalyptus grandis HOM05D002170 ORTHO05D005003 3.2e-28 127.9 71 91.5
QL02p018561 Quercus lobata HOM05D002170 ORTHO05D005003 3.2e-28 127.9 71 91.5
RcHm_v2.0_Chr6g0299281 Rosa chinensis HOM05D002170 ORTHO05D005003 3.2e-28 127.9 71 90.1
Atru.chr7.2551 Acer truncatum HOM05D002170 ORTHO05D005003 5.5e-28 127.1 71 94.4
Thecc.09G014300 Theobroma cacao HOM05D002170 ORTHO05D005003 5.5e-28 127.1 71 90.1
Nn2g14023 Nelumbo nucifera HOM05D002170 ORTHO05D005003 7.1e-28 126.7 71 88.7
CANSAT11G1789 Cannabis sativa HOM05D002170 ORTHO05D005003 9.3e-28 126.3 71 90.1
FvH4_2g41230 Fragaria vesca HOM05D002170 ORTHO05D005003 9.3e-28 126.3 71 88.7
FAN15G1846 Fragaria x ananassa HOM05D002170 ORTHO05D005003 9.3e-28 126.3 71 88.7
FAN27G0183 Fragaria x ananassa HOM05D002170 ORTHO05D005003 9.3e-28 126.3 71 88.7
Dinv10283 Davidia involucrata HOM05D002170 ORTHO05D005003 1.2e-27 125.9 69 91.3
MBI15_g08396_MAGBIO Magnolia biondii HOM05D002170 ORTHO05D005003 1.6e-27 125.6 71 87.3
CiPaw.07G231100 Carya illinoinensis HOM05D002170 ORTHO05D005003 2.1e-27 125.2 71 90.1
Gohir.A06G109900 Gossypium hirsutum HOM05D002170 ORTHO05D005003 2.1e-27 125.2 71 88.7
CDE05G2090 Ceratophyllum demersum HOM05D002170 ORTHO05D005003 2.7e-27 124.8 71 87.3
Gohir.D06G104300 Gossypium hirsutum HOM05D002170 ORTHO05D005003 3.5e-27 124.4 71 88.7
Gorai.010G119500 Gossypium raimondii HOM05D002170 ORTHO05D005003 3.5e-27 124.4 71 88.7
CiPaw.08G005300 Carya illinoinensis HOM05D002170 ORTHO05D005003 6.0e-27 123.6 71 90.1
CDE02G0333 Ceratophyllum demersum HOM05D002170 ORTHO05D005003 7.9e-27 123.2 71 85.9
Ciclev10007357m.g Citrus clementina HOM05D002170 ORTHO05D005003 7.9e-27 123.2 67 92.5
Duzib168G2019 Durio zibethinus HOM05D002170 ORTHO05D005003 7.9e-27 123.2 71 87.3
Dinv18466 Davidia involucrata HOM05D002170 ORTHO05D005003 1.0e-26 122.9 69 88.4
Ah.15g090090 Amaranthus hybridus HOM05D002170 ORTHO05D005003 3.0e-26 121.3 71 85.9
Actinidia14137 Actinidia chinensis HOM05D002170 ORTHO05D005003 3.9e-26 120.9 71 88.7
AUR62042299 Chenopodium quinoa HOM05D002170 ORTHO05D005003 3.9e-26 120.9 70 87.1
Duzib150G1070 Durio zibethinus HOM05D002170 ORTHO05D005003 5.1e-26 120.6 71 84.5
Sabra06G0208300 Salix brachista HOM05D002170 ORTHO05D005003 6.7e-26 120.2 71 85.9
Actinidia23116 Actinidia chinensis HOM05D002170 ORTHO05D005003 8.7e-26 119.8 71 87.3
EL10Ac7g17340 Beta vulgaris HOM05D002170 ORTHO05D005003 8.7e-26 119.8 71 84.5
AUR62040507 Chenopodium quinoa HOM05D002170 ORTHO05D005003 1.1e-25 119.4 70 85.7
Aa31LG3G16300 Aethionema arabicum HOM05D002170 ORTHO05D005003 1.9e-25 118.6 71 90.1
CSS0015318 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D005003 1.9e-25 118.6 71 85.9
BcaNung03197 Brassica carinata HOM05D002170 ORTHO05D005003 2.5e-25 118.2 71 88.7
Sp6g32650 Schrenkiella parvula HOM05D002170 ORTHO05D005003 2.5e-25 118.2 71 88.7
Rhsim02G0216100 Rhododendron simsii HOM05D002170 ORTHO05D005003 7.4e-25 116.7 71 84.5
HanXRQChr03g0081441 Helianthus annuus HOM05D002170 ORTHO05D005003 9.6e-25 116.3 71 84.5
Sp2g22460 Schrenkiella parvula HOM05D002170 ORTHO05D005003 9.6e-25 116.3 71 87.3
Aqoxy7G03347 Aquilegia oxysepala HOM05D002170 ORTHO05D005003 1.3e-24 115.9 71 81.7
AL6G36690 Arabidopsis lyrata HOM05D002170 ORTHO05D005003 1.3e-24 115.9 71 87.3
AT5G25060 Arabidopsis thaliana HOM05D002170 ORTHO05D005003 1.3e-24 115.9 71 87.3
Nitab4.5_0005295g0020 Nicotiana tabacum HOM05D002170 ORTHO05D005003 2.1e-24 115.2 64 92.2
Sopen03g004110 Solanum pennellii HOM05D002170 ORTHO05D005003 2.8e-24 114.8 64 90.6
ClCG08G013750 Citrullus lanatus HOM05D002170 ORTHO05D005003 3.7e-24 114.4 71 83.1
MELO3C011306.2 Cucumis melo HOM05D002170 ORTHO05D005003 3.7e-24 114.4 71 83.1
CsaV3_2G032530 Cucumis sativus L. HOM05D002170 ORTHO05D005003 3.7e-24 114.4 71 83.1
Lalb_Chr05g0229031 Lupinus albus HOM05D002170 ORTHO05D005003 3.7e-24 114.4 71 83.1
Peaxi162Scf00688g00229 Petunia axillaris HOM05D002170 ORTHO05D005003 3.7e-24 114.4 65 89.2
Sed0020863 Sechium edule HOM05D002170 ORTHO05D005003 3.7e-24 114.4 71 83.1
CARHR188430 Cardamine hirsuta HOM05D002170 ORTHO05D005003 4.8e-24 114.0 71 85.9
Nitab4.5_0001894g0050 Nicotiana tabacum HOM05D002170 ORTHO05D005003 4.8e-24 114.0 64 90.6
Oeu009655.1 Olea europaea HOM05D002170 ORTHO05D005003 4.8e-24 114.0 65 86.2
Lsat_1_v5_gn_5_62020 Lactuca sativa HOM05D002170 ORTHO05D005003 6.2e-24 113.6 71 83.1
MSTRG.25828 Avicennia marina HOM05D002170 ORTHO05D005003 8.2e-24 113.2 65 89.2
Nitab4.5_0000927g0020 Nicotiana tabacum HOM05D002170 ORTHO05D005003 8.2e-24 113.2 65 89.2
SalBow4G1870 Salvia bowleyana HOM05D002170 ORTHO05D005003 8.2e-24 113.2 64 89.1
Solyc03g025280.4 Solanum lycopersicum HOM05D002170 ORTHO05D005003 1.1e-23 112.8 64 89.1
BcaC04g23569 Brassica carinata HOM05D002170 ORTHO05D005003 1.4e-23 112.5 71 83.1
A09p06320 Brassica napus HOM05D002170 ORTHO05D005003 1.4e-23 112.5 71 83.1
Migut.E01450 Erythranthe guttata HOM05D002170 ORTHO05D005003 1.4e-23 112.5 64 85.9
Nitab4.5_0001798g0020 Nicotiana tabacum HOM05D002170 ORTHO05D005003 1.4e-23 112.5 65 87.7
Sed0005523 Sechium edule HOM05D002170 ORTHO05D005003 1.4e-23 112.5 71 81.7
vmacro11266 Vaccinium macrocarpon HOM05D002170 ORTHO05D005003 1.4e-23 112.5 71 81.7
Carub.0006s2289 Capsella rubella HOM05D002170 ORTHO05D005003 1.8e-23 112.1 71 84.5
Thhalv10003609m.g Eutrema salsugineum HOM05D002170 ORTHO05D005003 1.8e-23 112.1 71 84.5
Peaxi162Scf00227g00611 Petunia axillaris HOM05D002170 ORTHO05D005003 4.0e-23 110.9 64 89.1
Prupe.1G395500 Prunus persica HOM05D002170 ORTHO05D005003 4.0e-23 110.9 71 78.9
unitig_0.g2818 Utricularia gibba HOM05D002170 ORTHO05D005003 4.0e-23 110.9 64 85.9
Ah.01g016890 Amaranthus hybridus HOM05D002170 ORTHO05D005003 5.3e-23 110.5 71 76.1
ATR0749G037 Amborella trichopoda HOM05D002170 ORTHO05D005003 6.9e-23 110.2 71 80.3
Nitab4.5_0000748g0050 Nicotiana tabacum HOM05D002170 ORTHO05D005003 6.9e-23 110.2 65 86.2
Cc08_g07300 Coffea canephora HOM05D002170 ORTHO05D005003 9.0e-23 109.8 64 84.4
BcaB04g19807 Brassica carinata HOM05D002170 ORTHO05D005003 2.0e-22 108.6 71 81.7
BraA09t36277Z Brassica rapa HOM05D002170 ORTHO05D005003 2.0e-22 108.6 71 81.7
HanXRQChr13g0412271 Helianthus annuus HOM05D002170 ORTHO05D005003 3.4e-22 107.8 71 83.1
BolC9t53617H Brassica oleracea HOM05D002170 ORTHO05D005003 4.5e-22 107.5 71 80.3
Gohir.D08G274700 Gossypium hirsutum HOM05D002170 ORTHO05D005003 7.6e-22 106.7 71 77.5
Gorai.004G293200 Gossypium raimondii HOM05D002170 ORTHO05D005003 7.6e-22 106.7 71 77.5
Gohir.A08G253000 Gossypium hirsutum HOM05D002170 ORTHO05D005003 2.2e-21 105.1 71 77.5
Manes.16G131000 Manihot esculenta HOM05D002170 ORTHO05D005003 2.9e-21 104.8 71 76.1
Sc07g0003300 Simmondsia chinensis HOM05D002170 ORTHO05D005003 3.8e-21 104.4 71 76.1
HPP92_017465 Vanilla planifolia HOM05D007008 ORTHO05D008622 3.8e-21 104.4 71 78.9
Pp3c24_10060 Physcomitrium patens HOM05D002170 ORTHO05D005003 7.1e-20 100.1 65 73.8
Pp3c24_10090 Physcomitrium patens HOM05D002170 ORTHO05D005003 7.1e-20 100.1 65 73.8
Pp3c23_11510 Physcomitrium patens HOM05D002170 ORTHO05D005003 9.3e-20 99.8 65 73.8
vmacro16501 Vaccinium macrocarpon HOM05D002170 ORTHO05D005003 3.9e-18 94.4 71 71.8
SEGI_25040 Sequoiadendron giganteum HOM05D002170 ORTHO05D005003 7.4e-17 90.1 66 66.7
SMO347G0495 Selaginella moellendorffii HOM05D002170 ORTHO05D005003 2.2e-16 88.6 68 63.2
SEGI_31632 Sequoiadendron giganteum HOM05D002170 ORTHO05D005003 3.7e-16 87.8 71 62.0
Zm00001eb233960 Zea mays HOM05D002170 ORTHO05D005003 6.3e-16 87.0 66 66.7
Zm00001eb234030 Zea mays HOM05D002170 ORTHO05D005003 6.3e-16 87.0 66 66.7
CBR_g26149 Chara braunii HOM05D002170 ORTHO05D005003 1.1e-15 86.3 71 60.6
ECA240G4525 Erigeron canadensis HOM05D002170 ORTHO05D005003 1.1e-15 86.3 71 63.4
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 9.0e-15 83.2 46 84.8
Mapoly0144s0002 Marchantia polymorpha HOM05D002170 ORTHO05D005003 9.0e-15 83.2 71 59.2
Oeu021911.1 Olea europaea HOM05D002170 ORTHO05D005003 4.5e-14 80.9 65 66.2
Haze_21390 Corylus avellana HOM05D002170 ORTHO05D005003 1.7e-13 79.0 47 78.7
Pp3s245_40 Physcomitrium patens HOM05D002170 ORTHO05D005003 2.2e-13 78.6 56 67.9
BNapus_Darmor_BZH_scaffold_241p00050 Brassica napus HOM05D002170 ORTHO05D005003 3.0e-10 68.2 71 59.2
Cre03.g158150 Chlamydomonas reinhardtii HOM05D002170 ORTHO05D005003 3.9e-10 67.8 69 56.5
TAR636G0681 Trochodendron aralioides HOM05D000200 ORTHO05D000262 8.2e-08 60.1 36 75.0
MCO02G189 Micromonas commoda HOM05D002170 ORTHO05D005003 1.1e-07 59.7 74 43.2
Carub.0006s0931 Capsella rubella HOM05D002170 ORTHO05D005003 1.4e-07 59.3 71 53.5
A06p35810 Brassica napus HOM05D002170 ORTHO05D005003 1.8e-07 58.9 46 69.6


User provided reference genes

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