Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 0.0e+00 1424.8 706 100.0
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 0.0e+00 1288.1 709 89.8
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 0.0e+00 1269.6 701 89.6
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 0.0e+00 1262.3 711 88.0
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 0.0e+00 1245.7 702 86.6
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 0.0e+00 1241.9 698 87.1
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 0.0e+00 1236.9 706 86.1
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 0.0e+00 1224.2 700 86.1
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 0.0e+00 1218.4 700 85.4
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 0.0e+00 1215.7 705 85.1
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 0.0e+00 1168.7 706 85.0
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 0.0e+00 1142.5 712 79.6
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 0.0e+00 1139.4 705 79.6
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 0.0e+00 1128.2 704 78.0
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 0.0e+00 1126.7 704 77.8
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 0.0e+00 1124.8 705 77.3
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 0.0e+00 1119.8 705 78.0
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 0.0e+00 1118.2 705 78.0
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 0.0e+00 1117.8 707 77.5
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 0.0e+00 1117.4 714 77.3
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 0.0e+00 1116.7 704 77.4
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 0.0e+00 1115.5 697 78.2
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 0.0e+00 1114.4 705 77.2
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 0.0e+00 1112.4 705 77.3
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 0.0e+00 1111.3 705 77.6
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 0.0e+00 1109.0 708 78.1
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 0.0e+00 1108.6 708 77.5
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 0.0e+00 1106.7 715 77.5
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 0.0e+00 1105.1 707 76.8
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 0.0e+00 1103.6 705 76.7
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 0.0e+00 1102.0 705 75.6
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 0.0e+00 1099.3 715 77.3
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 0.0e+00 1098.2 715 77.3
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 0.0e+00 1092.4 704 75.7
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 0.0e+00 1090.5 717 76.8
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 0.0e+00 1087.0 708 75.0
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 9.7e-312 1072.8 794 69.3
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 1.3e-310 1069.3 713 73.8
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 1.1e-309 1066.2 706 74.4
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 1.5e-308 1062.4 705 75.0
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 2.0e-308 1062.0 703 74.1
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 3.8e-307 1057.7 708 72.9
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 1.2e-305 1052.7 707 73.6
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 4.6e-305 1050.8 708 73.3
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 6.0e-305 1050.4 705 73.9
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 1.0e-304 1049.7 701 73.6
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 6.7e-304 1047.0 708 72.6
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 8.7e-304 1046.6 718 71.0
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 8.7e-304 1046.6 711 72.2
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 8.7e-304 1046.6 710 72.4
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 3.3e-303 1044.6 703 72.8
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 4.3e-303 1044.3 707 72.8
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 2.1e-302 1042.0 698 73.6
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 2.8e-302 1041.6 711 72.0
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 5.3e-301 1037.3 742 70.2
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 3.4e-300 1034.6 710 72.5
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 4.5e-300 1034.2 705 72.2
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 2.9e-299 1031.6 702 72.4
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 4.9e-299 1030.8 704 72.0
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.5e-298 1028.5 731 72.0
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 1.8e-296 1022.3 700 71.7
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 9.7e-295 1016.5 721 70.0
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 2.2e-294 1015.4 713 71.2
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 3.7e-294 1014.6 700 70.9
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 8.2e-294 1013.4 709 70.4
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 8.2e-294 1013.4 700 70.9
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 2.4e-293 1011.9 698 70.1
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 3.1e-293 1011.5 704 70.0
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 1.5e-292 1009.2 714 70.9
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 2.6e-292 1008.4 704 69.3
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 4.5e-292 1007.7 706 70.1
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 3.8e-291 1004.6 694 70.5
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 8.5e-291 1003.4 695 70.4
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 1.4e-290 1002.7 729 68.7
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 1.2e-289 999.6 708 68.8
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 3.6e-289 998.0 704 69.6
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 2.0e-287 992.3 683 71.0
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 2.5e-287 991.9 695 70.1
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 2.8e-286 988.4 704 69.0
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 4.1e-285 984.6 670 72.1
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 5.0e-283 977.6 706 69.3
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 8.5e-283 976.9 707 69.9
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 1.0e-280 969.9 711 68.5
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 8.8e-280 966.8 778 64.0
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 3.5e-276 954.9 760 64.1
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 2.9e-275 951.8 701 67.9
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 5.5e-274 947.6 699 65.8
Sc17g0005780 Simmondsia chinensis HOM05D005873 ORTHO05D007582 1.2e-268 929.9 592 75.2
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 4.2e-266 921.4 709 65.9
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 6.8e-264 914.1 584 76.9
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 1.7e-262 909.4 707 65.1
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 1.3e-259 899.8 671 65.9
Dinv40666 Davidia involucrata HOM05D005873 ORTHO05D007582 2.7e-257 892.1 553 77.9
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 1.1e-250 870.2 712 63.5
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 1.6e-244 849.7 714 61.3
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 1.1e-242 843.6 707 61.8
Manes.17G054900 Manihot esculenta HOM05D005873 ORTHO05D007582 7.5e-239 830.9 548 75.2
Cpa.g.sc7.54 Carica papaya HOM05D005873 ORTHO05D007582 1.9e-226 789.6 523 75.3
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 2.1e-217 759.6 688 54.8
Pp3c24_8100 Physcomitrium patens HOM05D005873 ORTHO05D007582 9.0e-208 727.6 686 54.8
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 3.4e-199 699.1 746 54.0
CBR_g39927 Chara braunii HOM05D005873 ORTHO05D007582 3.0e-187 659.4 882 43.8
SMO367G0884 Selaginella moellendorffii HOM05D005873 ORTHO05D007582 5.1e-187 658.7 692 50.1
Eucgr.B01507 Eucalyptus grandis HOM05D005873 ORTHO05D007582 1.1e-176 624.4 449 67.7
CBR_g50802 Chara braunii HOM05D005873 ORTHO05D007582 1.5e-175 620.5 838 43.8
Haze_06243 Corylus avellana HOM05D005873 ORTHO05D007582 1.1e-173 614.4 384 76.3
Os01g0614900 Oryza sativa ssp. japonica HOM05D005873 ORTHO05D007582 1.2e-164 584.3 681 47.3
Mapoly0015s0071 Marchantia polymorpha HOM05D005873 ORTHO05D007582 7.7e-159 565.1 496 57.5
MCO13G516 Micromonas commoda HOM05D005873 ORTHO05D007582 7.2e-149 531.9 745 43.2
PRCOL_00005698 Prasinoderma coloniale HOM05D005873 ORTHO05D007582 1.6e-143 514.2 726 43.4
Haze_26854 Corylus avellana HOM05D005873 ORTHO05D007582 1.3e-134 484.6 714 39.1
Cfa025052 Carpinus fangiana HOM05D005873 ORTHO05D007582 2.3e-131 473.8 747 40.0
Cre03.g165215 Chlamydomonas reinhardtii HOM05D005873 ORTHO05D007582 1.8e-123 447.6 811 36.6
CDE08G0418 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 2.0e-114 417.5 303 71.0
Actinidia16800 Actinidia chinensis HOM05D005873 ORTHO05D007582 2.6e-114 417.2 333 66.4
Zm00001eb358160 Zea mays HOM05D005873 ORTHO05D007582 6.6e-110 402.5 357 58.8
SHI28554 Sapria himalayana HOM05D005873 ORTHO05D007582 5.3e-75 286.6 268 56.0
CDE08G0836 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 1.9e-72 278.1 201 67.7
TPR.G23454 Trifolium pratense HOM05D001972 ORTHO05D002555 8.7e-62 242.7 132 91.7
unitig_0.g713 Utricularia gibba HOM05D005873 ORTHO05D007582 7.4e-61 239.6 193 63.2
CDE02G2814 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 2.5e-56 224.6 164 65.9
Psat0s133g0080 Pisum sativum HOM05D005873 ORTHO05D007582 1.0e-41 176.0 253 50.2
SHI28555 Sapria himalayana HOM05D005873 ORTHO05D007582 1.0e-38 166.0 102 78.4
Haze_06244 Corylus avellana HOM05D005873 ORTHO05D007582 1.7e-36 158.7 112 70.5
SHI28562 Sapria himalayana HOM05D005873 ORTHO05D007582 2.7e-31 141.4 120 55.0
Potri.011G065402 Populus trichocarpa HOM05D005873 ORTHO05D007582 1.8e-30 138.7 100 73.0
SHI28558 Sapria himalayana HOM05D005873 ORTHO05D050808 1.7e-25 122.1 85 63.5
Sabra11G0047200 Salix brachista HOM05D005873 ORTHO05D007582 6.3e-20 103.6 61 77.0
Lsat_1_v5_gn_1_96960 Lactuca sativa HOM05D001670 ORTHO05D002980 2.4e-19 101.7 168 42.3
Lsat_1_v5_gn_9_10320 Lactuca sativa HOM05D001670 ORTHO05D002980 1.6e-18 99.0 62 69.4
Lsat_1_v5_gn_4_5981 Lactuca sativa HOM05D005873 ORTHO05D002980 4.3e-16 90.9 59 71.2
Oeu041773.1 Olea europaea HOM05D005873 ORTHO05D042378 6.1e-15 87.0 63 65.1
Cpa.g.c47463 Carica papaya HOM05D005873 ORTHO05D007582 1.2e-10 72.8 37 86.5
SHI28556 Sapria himalayana HOM05D005873 ORTHO05D007582 3.9e-09 67.8 51 56.9
A06p46270 Brassica napus HOM05D005873 ORTHO05D042378 1.5e-08 65.9 49 59.2


User provided reference genes

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