Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20539_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 6.8e-143 510.8 277 100.0
Ca_06309_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 1.3e-141 506.5 252 99.2
Psat2g013120 Pisum sativum HOM05D003624 ORTHO05D004188 1.4e-132 476.5 252 92.1
TPR.G29126 Trifolium pratense HOM05D003624 ORTHO05D004188 1.7e-130 469.5 252 91.3
Lalb_Chr04g0248651 Lupinus albus HOM05D003624 ORTHO05D004188 2.3e-127 459.1 253 88.5
Lalb_Chr03g0040441 Lupinus albus HOM05D003624 ORTHO05D004188 3.4e-126 455.3 253 87.7
Glyma.14G026000 Glycine max HOM05D003624 ORTHO05D004188 4.9e-125 451.4 253 87.4
Glyma.02G288800 Glycine max HOM05D003624 ORTHO05D004188 5.4e-124 448.0 253 86.2
Phvul.003G195200 Phaseolus vulgaris HOM05D003624 ORTHO05D004188 1.6e-123 446.4 254 86.6
LjContig00310g0027848 Lotus japonicus HOM05D003624 ORTHO05D004188 2.0e-123 446.0 252 86.1
Lj3g0001422 Lotus japonicus HOM05D003624 ORTHO05D004188 1.5e-121 439.9 252 84.9
Phvul.008G264800 Phaseolus vulgaris HOM05D003624 ORTHO05D004188 1.2e-120 436.8 254 85.4
Lj3g0027074 Lotus japonicus HOM05D003624 ORTHO05D004188 1.8e-119 433.0 241 86.3
VMungo0647G0302 Vigna mungo HOM05D003624 ORTHO05D004188 4.9e-117 424.9 254 83.5
Medtr5g092130 Medicago truncatula HOM05D003624 ORTHO05D004188 1.4e-116 423.3 253 83.4
arahy.Tifrunner.gnm1.ann1.2R0TK7 Arachis hypogaea HOM05D003624 ORTHO05D004188 9.2e-116 420.6 249 83.5
CANSAT54G1653 Cannabis sativa HOM05D003624 ORTHO05D004188 3.4e-110 402.1 242 80.6
Haze_15559 Corylus avellana HOM05D003624 ORTHO05D004188 3.2e-108 395.6 246 78.5
Psat2g013800 Pisum sativum HOM05D003624 ORTHO05D004188 7.1e-108 394.4 197 96.4
Hma1.2p1_0493F.1_g164850 Hydrangea macrophylla HOM05D003624 ORTHO05D004188 4.6e-107 391.7 249 76.3
Eucgr.C04375 Eucalyptus grandis HOM05D003624 ORTHO05D004188 2.3e-106 389.4 246 78.0
CiPaw.01G286800 Carya illinoinensis HOM05D003624 ORTHO05D004188 8.6e-106 387.5 248 77.4
Sed0019448 Sechium edule HOM05D003624 ORTHO05D004188 1.5e-105 386.7 249 74.7
ClCG01G013570 Citrullus lanatus HOM05D003624 ORTHO05D004188 5.6e-105 384.8 252 75.0
ClCG05G013440 Citrullus lanatus HOM05D003624 ORTHO05D004188 1.2e-104 383.6 243 78.2
QL09p007395 Quercus lobata HOM05D003624 ORTHO05D004188 1.6e-104 383.3 240 77.5
QL93p0214_0025 Quercus lobata HOM05D003624 ORTHO05D004188 1.6e-104 383.3 240 77.5
Actinidia02952 Actinidia chinensis HOM05D003624 ORTHO05D004188 2.8e-104 382.5 249 75.5
MELO3C014877.2 Cucumis melo HOM05D003624 ORTHO05D004188 2.8e-104 382.5 252 74.2
QL06p008449 Quercus lobata HOM05D003624 ORTHO05D004188 3.6e-104 382.1 250 75.2
CsaV3_3G027090 Cucumis sativus L. HOM05D003624 ORTHO05D004188 4.7e-104 381.7 243 76.5
Dinv27204 Davidia involucrata HOM05D003624 ORTHO05D004188 8.1e-104 380.9 245 76.3
PSO339G0082 Papaver somniferum HOM05D003624 ORTHO05D004188 1.8e-103 379.8 248 75.4
PGR142G3002 Punica granatum HOM05D003624 ORTHO05D004188 2.3e-103 379.4 245 76.3
TAR636G1411 Trochodendron aralioides HOM05D003624 ORTHO05D004188 2.3e-103 379.4 251 74.1
Prupe.2G234600 Prunus persica HOM05D003624 ORTHO05D004188 3.1e-103 379.0 250 74.8
PSO384G3632 Papaver somniferum HOM05D003624 ORTHO05D004188 4.0e-103 378.6 244 76.2
Sc10g0001520 Simmondsia chinensis HOM05D003624 ORTHO05D004188 5.2e-103 378.3 244 74.6
CDE07G1603 Ceratophyllum demersum HOM05D003624 ORTHO05D004188 6.8e-103 377.9 242 76.0
Nn3g21232 Nelumbo nucifera HOM05D003624 ORTHO05D004188 8.9e-103 377.5 246 74.0
Nn6g34375 Nelumbo nucifera HOM05D003624 ORTHO05D004188 1.2e-102 377.1 240 77.5
Nitab4.5_0001992g0010 Nicotiana tabacum HOM05D003624 ORTHO05D004188 1.2e-102 377.1 243 76.5
Peaxi162Scf00015g10126 Petunia axillaris HOM05D003624 ORTHO05D004188 1.5e-102 376.7 249 75.5
Peaxi162Scf00271g00059 Petunia axillaris HOM05D003624 ORTHO05D004188 1.5e-102 376.7 249 75.5
Peaxi162Scf00001g00045 Petunia axillaris HOM05D003624 ORTHO05D004188 2.6e-102 375.9 247 75.7
RcHm_v2.0_Chr1g0367021 Rosa chinensis HOM05D003624 ORTHO05D004188 2.6e-102 375.9 240 77.5
CDE04G0801 Ceratophyllum demersum HOM05D003624 ORTHO05D004188 3.4e-102 375.6 242 74.8
arahy.Tifrunner.gnm1.ann1.Y1WZEQ Arachis hypogaea HOM05D003624 ORTHO05D004188 4.4e-102 375.2 253 74.3
Potri.010G204900 Populus trichocarpa HOM05D003624 ORTHO05D004188 4.4e-102 375.2 246 74.0
Lj2C36T16 Lonicera japonica HOM05D003624 ORTHO05D004188 9.9e-102 374.0 243 75.7
THA.LOC104815670 Tarenaya hassleriana HOM05D003624 ORTHO05D004188 1.3e-101 373.6 268 69.4
Manes.07G115700 Manihot esculenta HOM05D003624 ORTHO05D004188 2.2e-101 372.9 250 75.6
CAN.G862.53 Capsicum annuum HOM05D003624 ORTHO05D004188 2.9e-101 372.5 242 75.6
Cpa.g.sc1.400 Carica papaya HOM05D003624 ORTHO05D004188 3.7e-101 372.1 250 73.2
MD01G1133500 Malus domestica HOM05D003624 ORTHO05D004188 3.7e-101 372.1 245 74.7
DCAR_001936 Daucus carota HOM05D003624 ORTHO05D004188 4.9e-101 371.7 239 76.2
Prupe.6G266400 Prunus persica HOM05D003624 ORTHO05D004188 4.9e-101 371.7 245 74.7
vmacro17110 Vaccinium macrocarpon HOM05D003624 ORTHO05D004188 4.9e-101 371.7 252 73.8
Nitab4.5_0006489g0020 Nicotiana tabacum HOM05D003624 ORTHO05D004188 6.4e-101 371.3 242 76.0
Oeu048253.2 Olea europaea HOM05D003624 ORTHO05D004188 8.4e-101 370.9 255 72.9
Sabra08G0039900 Salix brachista HOM05D003624 ORTHO05D004188 1.4e-100 370.2 243 72.0
Potri.008G055300 Populus trichocarpa HOM05D003624 ORTHO05D004188 1.9e-100 369.8 243 71.6
Rhsim03G0131100 Rhododendron simsii HOM05D003624 ORTHO05D004188 1.9e-100 369.8 244 75.0
Rhsim05G0153700 Rhododendron simsii HOM05D003624 ORTHO05D004188 5.4e-100 368.2 244 74.2
Cc07_g19190 Coffea canephora HOM05D003624 ORTHO05D004188 9.2e-100 367.5 252 72.6
Gohir.A10G218400 Gossypium hirsutum HOM05D003624 ORTHO05D004188 9.2e-100 367.5 248 73.4
Gohir.D10G228000 Gossypium hirsutum HOM05D003624 ORTHO05D004188 9.2e-100 367.5 252 72.2
Gorai.011G260400 Gossypium raimondii HOM05D003624 ORTHO05D004188 9.2e-100 367.5 252 72.2
Cc04_g09670 Coffea canephora HOM05D003624 ORTHO05D004188 1.2e-99 367.1 252 72.2
Duzib114G1042 Durio zibethinus HOM05D003624 ORTHO05D004188 1.2e-99 367.1 251 74.1
MBI12_g10423_MAGBIO Magnolia biondii HOM05D003624 ORTHO05D004188 2.7e-99 365.9 240 75.4
FvH4_7g22390 Fragaria vesca HOM05D003624 ORTHO05D004188 1.3e-98 363.6 241 75.5
FAN06G1965 Fragaria x ananassa HOM05D003624 ORTHO05D004188 1.3e-98 363.6 241 75.5
FAN06G4942 Fragaria x ananassa HOM05D003624 ORTHO05D004188 1.3e-98 363.6 241 75.5
FAN10G3681 Fragaria x ananassa HOM05D003624 ORTHO05D004188 1.7e-98 363.2 241 75.5
FAN01G1443 Fragaria x ananassa HOM05D003624 ORTHO05D004188 3.9e-98 362.1 237 76.4
FAN03G2437 Fragaria x ananassa HOM05D003624 ORTHO05D004188 5.1e-98 361.7 238 76.5
Carub.0001s4395 Capsella rubella HOM05D003624 ORTHO05D004188 6.6e-98 361.3 259 69.5
AL1G63460 Arabidopsis lyrata HOM05D003624 ORTHO05D004188 8.6e-98 360.9 261 68.2
FAN01G2477 Fragaria x ananassa HOM05D003624 ORTHO05D004188 1.9e-97 359.8 246 73.6
BcaC08g44198 Brassica carinata HOM05D003624 ORTHO05D004188 2.5e-97 359.4 240 71.2
BolC6t36805H Brassica oleracea HOM05D003624 ORTHO05D004188 2.5e-97 359.4 240 71.2
Aa31LG10G790 Aethionema arabicum HOM05D003624 ORTHO05D004188 3.3e-97 359.0 255 69.8
Aqoxy2G03154 Aquilegia oxysepala HOM05D003624 ORTHO05D004188 3.3e-97 359.0 248 69.8
AT1G55460 Arabidopsis thaliana HOM05D003624 ORTHO05D004188 3.3e-97 359.0 260 67.3
A05p17470 Brassica napus HOM05D003624 ORTHO05D004188 4.3e-97 358.6 241 72.2
C06p16060 Brassica napus HOM05D003624 ORTHO05D004188 4.3e-97 358.6 240 71.2
BraA05t20642Z Brassica rapa HOM05D003624 ORTHO05D004188 4.3e-97 358.6 241 72.2
COL.COLO4_15033 Corchorus olitorius HOM05D003624 ORTHO05D004188 4.3e-97 358.6 231 75.8
Thecc.10G043100 Theobroma cacao HOM05D003624 ORTHO05D004188 4.3e-97 358.6 216 80.1
CSS0018661 Camellia sinensis var. sinensis HOM05D003624 ORTHO05D004188 1.2e-96 357.1 258 71.3
CARHR045130 Cardamine hirsuta HOM05D003624 ORTHO05D004188 1.2e-96 357.1 255 68.2
Duzib106G1275 Durio zibethinus HOM05D003624 ORTHO05D004188 1.2e-96 357.1 216 81.0
Sp1g41070 Schrenkiella parvula HOM05D003624 ORTHO05D004188 1.2e-96 357.1 265 66.8
TWI60G1571 Tripterygium wilfordii HOM05D003624 ORTHO05D004188 1.2e-96 357.1 244 72.5
unitig_749.g13772 Utricularia gibba HOM05D003624 ORTHO05D004188 1.6e-96 356.7 240 75.4
Duzib106G0342 Durio zibethinus HOM05D003624 ORTHO05D004188 2.8e-96 355.9 216 80.6
AUR62031721 Chenopodium quinoa HOM05D003624 ORTHO05D004188 4.7e-96 355.1 254 69.7
Lsat_1_v5_gn_3_22041 Lactuca sativa HOM05D003624 ORTHO05D004188 4.7e-96 355.1 249 72.7
Ah.16g102270 Amaranthus hybridus HOM05D003624 ORTHO05D004188 6.2e-96 354.8 255 70.2
unitig_26.g9714 Utricularia gibba HOM05D001237 ORTHO05D001827 6.2e-96 354.8 204 83.8
Ciclev10005088m.g Citrus clementina HOM05D003624 ORTHO05D004188 2.4e-95 352.8 250 71.6
HanXRQChr08g0234751 Helianthus annuus HOM05D003624 ORTHO05D004188 2.4e-95 352.8 256 70.7
EL10Ac2g04634 Beta vulgaris HOM05D003624 ORTHO05D004188 3.1e-95 352.4 254 68.5
Thhalv10011527m.g Eutrema salsugineum HOM05D003624 ORTHO05D004188 5.2e-95 351.7 263 66.2
COL.COLO4_34579 Corchorus olitorius HOM05D003624 ORTHO05D004188 8.9e-95 350.9 231 75.8
ATR0691G007 Amborella trichopoda HOM05D003624 ORTHO05D004188 1.2e-94 350.5 253 70.0
Migut.B01491 Erythranthe guttata HOM05D003624 ORTHO05D004188 1.2e-94 350.5 244 73.4
AUR62032608 Chenopodium quinoa HOM05D003624 ORTHO05D004188 1.5e-94 350.1 251 70.5
BcaB02g10822 Brassica carinata HOM05D003624 ORTHO05D004188 2.0e-94 349.7 238 71.4
Sopen05g032980 Solanum pennellii HOM05D003624 ORTHO05D004188 4.9e-93 345.1 248 69.4
Atru.chr4.2829 Acer truncatum HOM05D003624 ORTHO05D004188 1.1e-92 344.0 258 67.8
PGSC0003DMG400023427 Solanum tuberosum HOM05D003624 ORTHO05D004188 1.1e-92 344.0 248 69.4
HPP92_019187 Vanilla planifolia HOM05D003624 ORTHO05D004188 1.4e-92 343.6 256 66.8
Solyc05g054500.1 Solanum lycopersicum HOM05D003624 ORTHO05D004188 2.4e-92 342.8 248 68.5
C03p92710 Brassica napus HOM05D003624 ORTHO05D004188 2.1e-91 339.7 222 73.0
A08p00650 Brassica napus HOM05D003624 ORTHO05D004188 2.7e-91 339.3 221 73.8
BraA08t32123Z Brassica rapa HOM05D003624 ORTHO05D004188 2.7e-91 339.3 221 73.8
BcaB04g16957 Brassica carinata HOM05D003624 ORTHO05D004188 3.5e-91 339.0 224 72.3
BcaC01g01521 Brassica carinata HOM05D003624 ORTHO05D004188 1.3e-90 337.0 222 73.4
BolSC126t60220H Brassica oleracea HOM05D003624 ORTHO05D004188 1.3e-90 337.0 222 73.4
SEGI_37535 Sequoiadendron giganteum HOM05D003624 ORTHO05D004188 2.3e-90 336.3 246 69.9
Nitab4.5_0000578g0060 Nicotiana tabacum HOM05D003624 ORTHO05D004188 6.6e-90 334.7 249 67.9
GSVIVG01008269001 Vitis vinifera HOM05D003624 ORTHO05D004188 3.6e-88 328.9 240 68.3
Mapoly0087s0013 Marchantia polymorpha HOM05D003624 ORTHO05D004188 1.2e-86 323.9 226 70.8
Pp3c24_1610 Physcomitrium patens HOM05D003624 ORTHO05D004188 1.5e-86 323.6 266 62.8
Rhsim05G0154000 Rhododendron simsii HOM05D003624 ORTHO05D004188 2.0e-86 323.2 244 66.4
CBR_g4138 Chara braunii HOM05D003624 ORTHO05D004188 1.1e-84 317.4 239 65.3
Aqoxy6G02821 Aquilegia oxysepala HOM05D003624 ORTHO05D004188 1.2e-83 313.9 247 64.4
Carub.0001s4393 Capsella rubella HOM05D003624 ORTHO05D004188 4.8e-80 302.0 165 84.8
Zm00001eb232160 Zea mays HOM05D003624 ORTHO05D004188 3.1e-79 299.3 199 71.4
SMO358G0194 Selaginella moellendorffii HOM05D003624 ORTHO05D004188 6.9e-79 298.1 247 59.5
AagrBONN_evm.TU.Sc2ySwM_368.2590 Anthoceros agrestis HOM05D003624 ORTHO05D004188 1.5e-78 297.0 225 65.3
Zm00001eb208070 Zea mays HOM05D003624 ORTHO05D004188 3.4e-78 295.8 199 70.4
RcHm_v2.0_Chr4g0406621 Rosa chinensis HOM05D003624 ORTHO05D004188 6.4e-77 291.6 258 62.0
SMO142G0061 Selaginella moellendorffii HOM05D003624 ORTHO05D004188 8.4e-77 291.2 217 64.5
AL185U10020 Arabidopsis lyrata HOM05D003624 ORTHO05D004188 7.1e-76 288.1 260 57.7
Os03g0570300 Oryza sativa ssp. japonica HOM05D003624 ORTHO05D004188 2.1e-75 286.6 175 74.9
Nitab4.5_0004476g0070 Nicotiana tabacum HOM05D003624 ORTHO05D004188 8.7e-74 281.2 251 58.2
Atru.chr11.11 Acer truncatum HOM05D003624 ORTHO05D004188 4.3e-73 278.9 159 78.6
CSS0014624 Camellia sinensis var. sinensis HOM05D003624 ORTHO05D004188 3.7e-72 275.8 222 63.5
Peaxi162Scf00015g01215 Petunia axillaris HOM05D003624 ORTHO05D004188 2.6e-70 269.6 203 69.0
Cre16.g654350 Chlamydomonas reinhardtii HOM05D003624 ORTHO05D004188 1.4e-68 263.8 194 63.4
Prupe.4G141300 Prunus persica HOM05D003624 ORTHO05D004188 4.2e-68 262.3 198 67.2
COL.COLO4_15032 Corchorus olitorius HOM05D003624 ORTHO05D004188 2.1e-64 250.0 147 78.9
ECA232G3640 Erigeron canadensis HOM05D003624 ORTHO05D004188 2.0e-62 243.4 200 65.5
ECA247G0176 Erigeron canadensis HOM05D003624 ORTHO05D004188 1.1e-60 237.7 191 67.5
CAN.G1013.23 Capsicum annuum HOM05D003624 ORTHO05D004188 8.7e-58 228.0 239 51.9
MCO11G291 Micromonas commoda HOM05D003624 ORTHO05D004188 3.7e-56 222.6 173 61.3
EL10Ac6g13458 Beta vulgaris HOM05D003624 ORTHO05D004188 1.7e-53 213.8 256 47.3
DCAR_027848 Daucus carota HOM05D003624 ORTHO05D004188 2.6e-49 199.9 165 59.4
QL08p059869 Quercus lobata HOM05D003624 ORTHO05D004188 4.3e-49 199.1 177 62.1
AT5G51795 Arabidopsis thaliana HOM05D003624 ORTHO05D004188 1.7e-48 197.2 248 45.2
SMO347G0189 Selaginella moellendorffii HOM05D003624 ORTHO05D004188 2.2e-48 196.8 176 54.0
Ca_06298_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 6.7e-42 175.3 99 91.9
Cfa024674 Carpinus fangiana HOM05D003624 ORTHO05D004188 8.8e-42 174.9 180 45.6
Prupe.1G588200 Prunus persica HOM05D003624 ORTHO05D004188 4.4e-41 172.6 145 62.8
Lj8P413T16 Lonicera japonica HOM05D003624 ORTHO05D004188 1.1e-39 167.9 190 51.6
Ca_06299_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 2.6e-38 163.3 99 88.9
Dinv02280 Davidia involucrata HOM05D003624 ORTHO05D004188 1.0e-34 151.4 104 67.3
CARHR218920 Cardamine hirsuta HOM05D003624 ORTHO05D004188 1.4e-31 141.0 81 74.1
Prupe.4G141400 Prunus persica HOM05D003624 ORTHO05D004188 2.4e-31 140.2 125 57.6
RcHm_v2.0_Chr2g0124991 Rosa chinensis HOM05D003624 ORTHO05D004188 9.1e-31 138.3 67 91.0
TAR625G1177 Trochodendron aralioides HOM05D003624 ORTHO05D004188 9.2e-15 85.1 84 53.6
RcHm_v2.0_Chr2g0124981 Rosa chinensis HOM05D003624 ORTHO05D004188 2.2e-08 63.9 84 50.0
MD07G1197800 Malus domestica HOM05D003624 ORTHO05D004188 1.1e-07 61.6 80 50.0
Aqoxy2G00783 Aquilegia oxysepala HOM05D003624 ORTHO05D004188 2.7e-06 57.0 67 43.3


User provided reference genes

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