Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20535_v3 Cicer arietinum L. HOM05D004410 ORTHO05D034587 1.3e-85 319.7 158 100.0
Ca_20536_v3 Cicer arietinum L. HOM05D004410 ORTHO05D034587 3.7e-85 318.2 158 99.4
Ca_30867_v3 Cicer arietinum L. HOM05D004410 ORTHO05D034587 3.7e-85 318.2 158 99.4
Medtr4g007420 Medicago truncatula HOM05D004410 ORTHO05D006134 3.5e-43 178.7 157 60.5
CANSAT78G0098 Cannabis sativa HOM05D004410 ORTHO05D006134 1.0e-42 177.2 153 60.8
Lj3g0011551 Lotus japonicus HOM05D004410 ORTHO05D006134 2.9e-42 175.6 153 62.7
CANSAT78G0037 Cannabis sativa HOM05D004410 ORTHO05D006134 5.0e-42 174.9 153 60.1
CANSAT78G1648 Cannabis sativa HOM05D004410 ORTHO05D006134 5.0e-42 174.9 153 60.1
Phvul.003G141775 Phaseolus vulgaris HOM05D004410 ORTHO05D006134 5.0e-42 174.9 153 62.1
Glyma.17G060900 Glycine max HOM05D004410 ORTHO05D006134 6.5e-42 174.5 153 62.1
CANSAT78G1079 Cannabis sativa HOM05D004410 ORTHO05D006134 8.5e-42 174.1 153 59.5
Lj3g0017980 Lotus japonicus HOM05D004410 ORTHO05D006134 8.5e-42 174.1 153 62.1
VMungo1215G0063 Vigna mungo HOM05D004410 ORTHO05D006134 8.5e-42 174.1 153 62.1
Glyma.13G099200 Glycine max HOM05D004410 ORTHO05D006134 3.2e-41 172.2 153 61.4
Potri.001G338700 Populus trichocarpa HOM05D004410 ORTHO05D006134 5.5e-41 171.4 154 59.7
Lalb_Chr07g0180591 Lupinus albus HOM05D004410 ORTHO05D006134 7.2e-41 171.0 153 61.4
Psat0s4042g0040 Pisum sativum HOM05D004410 ORTHO05D006134 7.2e-41 171.0 153 60.8
C03p15070 Brassica napus HOM05D004410 ORTHO05D006134 9.5e-41 170.6 154 61.0
BolC3t13949H Brassica oleracea HOM05D004410 ORTHO05D006134 9.5e-41 170.6 154 61.0
Carub.0008s1778 Capsella rubella HOM05D004410 ORTHO05D006134 1.2e-40 170.2 154 60.4
Aa31sc36G40 Aethionema arabicum HOM05D004410 ORTHO05D006134 1.6e-40 169.9 154 60.4
arahy.Tifrunner.gnm1.ann1.2H7I9L Arachis hypogaea HOM05D004410 ORTHO05D006134 1.6e-40 169.9 153 60.1
arahy.Tifrunner.gnm1.ann1.FB81IM Arachis hypogaea HOM05D004410 ORTHO05D006134 1.6e-40 169.9 153 60.1
Cpa.g.sc95.31 Carica papaya HOM05D004410 ORTHO05D006134 1.6e-40 169.9 154 60.4
Sp6g19010 Schrenkiella parvula HOM05D004410 ORTHO05D006134 1.6e-40 169.9 154 60.4
CARHR271080 Cardamine hirsuta HOM05D004410 ORTHO05D006134 2.7e-40 169.1 154 60.4
Ciclev10009088m.g Citrus clementina HOM05D004410 ORTHO05D006134 2.7e-40 169.1 154 61.0
CANSAT56G1932 Cannabis sativa HOM05D004410 ORTHO05D006134 3.6e-40 168.7 153 60.1
HanXRQChr06g0179561 Helianthus annuus HOM05D004410 ORTHO05D006134 3.6e-40 168.7 154 60.4
Manes.06G021200 Manihot esculenta HOM05D004410 ORTHO05D006134 3.6e-40 168.7 154 60.4
PSO210G0218 Papaver somniferum HOM05D004410 ORTHO05D006134 3.6e-40 168.7 153 60.8
AL8G33250 Arabidopsis lyrata HOM05D004410 ORTHO05D006134 4.7e-40 168.3 154 59.7
A03p12910 Brassica napus HOM05D004410 ORTHO05D006134 4.7e-40 168.3 154 60.4
A10p17910 Brassica napus HOM05D004410 ORTHO05D006134 4.7e-40 168.3 154 60.4
BraA03t10599Z Brassica rapa HOM05D004410 ORTHO05D006134 4.7e-40 168.3 154 60.4
Thhalv10014295m.g Eutrema salsugineum HOM05D004410 ORTHO05D006134 4.7e-40 168.3 154 59.7
TPR.G5373 Trifolium pratense HOM05D004410 ORTHO05D006134 4.7e-40 168.3 153 60.1
Nn8g40987 Nelumbo nucifera HOM05D004410 ORTHO05D006134 6.1e-40 167.9 154 61.0
Potri.018G049800 Populus trichocarpa HOM05D004410 ORTHO05D006134 6.1e-40 167.9 154 59.1
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 1.4e-39 166.8 153 60.8
PSO210G4717 Papaver somniferum HOM05D004410 ORTHO05D006134 1.4e-39 166.8 153 60.1
Rhsim12G0146500 Rhododendron simsii HOM05D004410 ORTHO05D006134 1.4e-39 166.8 154 59.7
TAR626G0361 Trochodendron aralioides HOM05D004410 ORTHO05D006134 1.4e-39 166.8 153 60.1
CSS0020745 Camellia sinensis var. sinensis HOM05D004410 ORTHO05D006134 1.8e-39 166.4 153 60.8
MD13G1245300 Malus domestica HOM05D004410 ORTHO05D006134 1.8e-39 166.4 157 58.6
TPR.G26767 Trifolium pratense HOM05D004410 ORTHO05D006134 1.8e-39 166.4 146 62.3
ECA236G3126 Erigeron canadensis HOM05D004410 ORTHO05D006134 2.3e-39 166.0 154 59.1
THA.LOC104817784 Tarenaya hassleriana HOM05D004410 ORTHO05D006134 2.3e-39 166.0 153 60.1
Eucgr.L02823 Eucalyptus grandis HOM05D004410 ORTHO05D006134 3.0e-39 165.6 154 59.7
Eucgr.C02260 Eucalyptus grandis HOM05D004410 ORTHO05D006134 5.2e-39 164.9 154 59.1
AT5G57280 Arabidopsis thaliana HOM05D004410 ORTHO05D006134 6.8e-39 164.5 154 58.4
Lsat_1_v5_gn_8_69561 Lactuca sativa HOM05D004410 ORTHO05D005614 6.8e-39 164.5 154 59.1
Thecc.09G180400 Theobroma cacao HOM05D004410 ORTHO05D006134 6.8e-39 164.5 153 60.1
AagrBONN_evm.TU.Sc2ySwM_344.4914 Anthoceros agrestis HOM05D004410 ORTHO05D006134 1.2e-38 163.7 154 57.8
Hund26318 Selenicereus undatus HOM05D004410 ORTHO05D006134 1.2e-38 163.7 154 57.1
PGSC0003DMG400027051 Solanum tuberosum HOM05D004410 ORTHO05D006134 1.2e-38 163.7 154 58.4
Duzib170G0185 Durio zibethinus HOM05D004410 ORTHO05D006134 1.5e-38 163.3 154 59.1
Mapoly0020s0093 Marchantia polymorpha HOM05D004410 ORTHO05D006134 1.5e-38 163.3 154 55.2
Os02g0804300 Oryza sativa ssp. japonica HOM05D004410 ORTHO05D006134 1.5e-38 163.3 153 58.2
CANSAT21G0708 Cannabis sativa HOM05D004410 ORTHO05D006134 2.0e-38 162.9 153 57.5
Cc09_g07700 Coffea canephora HOM05D004410 ORTHO05D006134 2.0e-38 162.9 153 59.5
Pp3c12_7620 Physcomitrium patens HOM05D004410 ORTHO05D006134 2.0e-38 162.9 154 55.8
Gohir.D08G028700 Gossypium hirsutum HOM05D004410 ORTHO05D006134 2.6e-38 162.5 154 58.4
Gorai.004G025800 Gossypium raimondii HOM05D004410 ORTHO05D006134 2.6e-38 162.5 154 58.4
Aqoxy3G03862 Aquilegia oxysepala HOM05D004410 ORTHO05D006134 3.4e-38 162.2 154 57.8
Ah.09g230150 Amaranthus hybridus HOM05D004410 ORTHO05D006134 4.4e-38 161.8 146 58.2
COL.COLO4_23558 Corchorus olitorius HOM05D004410 ORTHO05D006134 4.4e-38 161.8 154 58.4
MD16G1253000 Malus domestica HOM05D004410 ORTHO05D006134 4.4e-38 161.8 154 57.8
Prupe.1G079400 Prunus persica HOM05D004410 ORTHO05D006134 4.4e-38 161.8 157 56.7
RcHm_v2.0_Chr4g0400231 Rosa chinensis HOM05D004410 ORTHO05D006134 4.4e-38 161.8 157 56.1
Solyc06g072250.3 Solanum lycopersicum HOM05D004410 ORTHO05D006134 4.4e-38 161.8 154 57.1
Sopen06g028570 Solanum pennellii HOM05D004410 ORTHO05D006134 4.4e-38 161.8 154 57.1
SGA_v2.0_scaffold172G39079 Striga asiatica HOM05D004410 ORTHO05D006134 4.4e-38 161.8 154 59.1
MSTRG.4318 Avicennia marina HOM05D004410 ORTHO05D006134 5.7e-38 161.4 154 59.1
FvH4_4g07620 Fragaria vesca HOM05D004410 ORTHO05D006134 5.7e-38 161.4 157 56.7
FAN07G0604 Fragaria x ananassa HOM05D004410 ORTHO05D006134 5.7e-38 161.4 157 56.7
QL11p004818 Quercus lobata HOM05D004410 ORTHO05D006134 5.7e-38 161.4 154 57.8
TWI75G1515 Tripterygium wilfordii HOM05D004410 ORTHO05D006134 5.7e-38 161.4 154 55.8
unitig_26.g9274 Utricularia gibba HOM05D004410 ORTHO05D006134 5.7e-38 161.4 154 59.1
Lj7C624G8 Lonicera japonica HOM05D004410 ORTHO05D006134 7.5e-38 161.0 154 57.8
CAN.G65.73 Capsicum annuum HOM05D004410 ORTHO05D006134 9.8e-38 160.6 154 57.8
CiPaw.08G034000 Carya illinoinensis HOM05D004410 ORTHO05D006134 9.8e-38 160.6 153 57.5
MELO3C008596.2 Cucumis melo HOM05D004410 ORTHO05D006134 1.3e-37 160.2 154 57.8
CsaV3_5G008380 Cucumis sativus L. HOM05D004410 ORTHO05D006134 1.3e-37 160.2 154 57.8
Dinv26445 Davidia involucrata HOM05D004410 ORTHO05D006134 1.3e-37 160.2 155 59.4
FAN22G1351 Fragaria x ananassa HOM05D004410 ORTHO05D006134 1.3e-37 160.2 157 56.1
Cfa005486 Carpinus fangiana HOM05D004410 ORTHO05D006134 1.7e-37 159.8 153 58.2
Cfa013429 Carpinus fangiana HOM05D004410 ORTHO05D006134 1.7e-37 159.8 153 58.2
Haze_21974 Corylus avellana HOM05D004410 ORTHO05D006134 1.7e-37 159.8 153 58.2
SalBow8G1532 Salvia bowleyana HOM05D004410 ORTHO05D006134 2.2e-37 159.5 153 58.8
Ah.14g083650 Amaranthus hybridus HOM05D004410 ORTHO05D006134 2.8e-37 159.1 154 56.5
MELO3C008923.2 Cucumis melo HOM05D004410 ORTHO05D006134 2.8e-37 159.1 154 57.1
Sabra03G0001500 Salix brachista HOM05D004410 ORTHO05D006134 2.8e-37 159.1 168 54.8
Oeu016123.1 Olea europaea HOM05D004410 ORTHO05D006134 3.7e-37 158.7 154 57.1
GSVIVG01010906001 Vitis vinifera HOM05D004410 ORTHO05D006134 3.7e-37 158.7 153 58.8
Gohir.A08G018100 Gossypium hirsutum HOM05D004410 ORTHO05D006134 4.9e-37 158.3 154 57.1
CDE06G0833 Ceratophyllum demersum HOM05D004410 ORTHO05D006134 6.3e-37 157.9 154 53.9
Lj5C681T1 Lonicera japonica HOM05D004410 ORTHO05D006134 6.3e-37 157.9 154 57.1
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 1.4e-36 156.8 154 57.8
ATR0561G198 Amborella trichopoda HOM05D004410 ORTHO05D006134 1.8e-36 156.4 154 57.1
Peaxi162Scf00171g00233 Petunia axillaris HOM05D004410 ORTHO05D006134 1.8e-36 156.4 154 56.5
Sc14g0001390 Simmondsia chinensis HOM05D004410 ORTHO05D006134 1.8e-36 156.4 153 56.9
TWI36G0301 Tripterygium wilfordii HOM05D004410 ORTHO05D006134 1.8e-36 156.4 154 54.5
Zm00001eb258180 Zea mays HOM05D004410 ORTHO05D006134 1.8e-36 156.4 153 56.2
Oeu038397.1 Olea europaea HOM05D004410 ORTHO05D006134 2.4e-36 156.0 154 56.5
BcaB05g22331 Brassica carinata HOM05D004410 ORTHO05D006134 3.1e-36 155.6 154 56.5
SEGI_20363 Sequoiadendron giganteum HOM05D004410 ORTHO05D006134 3.1e-36 155.6 154 54.5
CSS0004658 Camellia sinensis var. sinensis HOM05D004410 ORTHO05D006134 9.2e-36 154.1 153 58.8
Nitab4.5_0000339g0120 Nicotiana tabacum HOM05D004410 ORTHO05D006134 9.2e-36 154.1 154 55.8
AagrBONN_evm.TU.Sc2ySwM_344.3468 Anthoceros agrestis HOM05D004410 ORTHO05D006134 2.0e-35 152.9 154 55.2
Sed0003098 Sechium edule HOM05D004410 ORTHO05D006134 2.0e-35 152.9 153 54.9
FAN17G1447 Fragaria x ananassa HOM05D004410 ORTHO05D006134 3.5e-35 152.1 175 50.3
SMO367G1042 Selaginella moellendorffii HOM05D004410 ORTHO05D006134 4.5e-35 151.8 154 54.5
EL10Ac8g18319 Beta vulgaris HOM05D004410 ORTHO05D006134 5.9e-35 151.4 153 55.6
AUR62021333 Chenopodium quinoa HOM05D004410 ORTHO05D006134 5.9e-35 151.4 154 54.5
AUR62033248 Chenopodium quinoa HOM05D004410 ORTHO05D006134 5.9e-35 151.4 154 55.2
SGA_v2.0_scaffold36G14352 Striga asiatica HOM05D004410 ORTHO05D006134 7.7e-35 151.0 153 56.9
Migut.D01496 Erythranthe guttata HOM05D004410 ORTHO05D006134 1.3e-34 150.2 153 56.2
PGR044G0126 Punica granatum HOM05D004410 ORTHO05D006134 8.6e-34 147.5 185 48.6
FAN12G4072 Fragaria x ananassa HOM05D004410 ORTHO05D006134 1.1e-33 147.1 177 49.7
Sabra03G0004700 Salix brachista HOM05D004410 ORTHO05D006134 5.6e-33 144.8 192 47.9
Nitab4.5_0003040g0070 Nicotiana tabacum HOM05D004410 ORTHO05D006134 1.4e-31 140.2 105 67.6
vmacro16466 Vaccinium macrocarpon HOM05D004410 ORTHO05D006134 5.2e-31 138.3 218 42.2
Cre09.g398104 Chlamydomonas reinhardtii HOM05D004410 ORTHO05D006134 1.5e-30 136.7 154 47.4
Medtr4g127640 Medicago truncatula HOM05D004410 ORTHO05D006134 2.0e-30 136.3 126 57.9
PRCOL_00001013 Prasinoderma coloniale HOM05D004410 ORTHO05D006134 2.6e-30 136.0 157 49.0
CBR_g3667 Chara braunii HOM05D004410 ORTHO05D006134 3.4e-30 135.6 154 47.4
ClCG11G007510 Citrullus lanatus HOM05D004410 ORTHO05D006134 2.2e-29 132.9 127 55.9
Nitab4.5_0000782g0050 Nicotiana tabacum HOM05D004410 ORTHO05D006134 8.3e-29 131.0 112 61.6
MBI13_g31549_MAGBIO Magnolia biondii HOM05D004410 ORTHO05D006134 9.2e-28 127.5 126 53.2
CAN.G65.105 Capsicum annuum HOM05D004410 ORTHO05D006134 1.6e-27 126.7 132 53.0
MCO01G124 Micromonas commoda HOM05D004410 ORTHO05D006134 5.0e-26 121.7 157 43.9
Ca_20516_v3 Cicer arietinum L. HOM05D004410 ORTHO05D147600 1.9e-25 119.8 116 57.8
Nitab4.5_0000033g0380 Nicotiana tabacum HOM05D004410 ORTHO05D006134 3.6e-24 115.5 89 67.4
Haze_27417 Corylus avellana HOM05D004410 ORTHO05D006134 8.0e-24 114.4 162 45.1
BcaC03g14169 Brassica carinata HOM05D004410 ORTHO05D006134 8.9e-23 110.9 89 65.2
C02p14420 Brassica napus HOM05D004410 ORTHO05D006134 8.9e-23 110.9 89 65.2
BolC2t07566H Brassica oleracea HOM05D004410 ORTHO05D006134 8.9e-23 110.9 89 65.2
Actinidia40404 Actinidia chinensis HOM05D004410 ORTHO05D006134 3.2e-20 102.4 91 59.3
Peaxi162Scf03693g00003 Petunia axillaris HOM05D004410 ORTHO05D006134 5.4e-20 101.7 116 50.0
Dinv25402 Davidia involucrata HOM05D004410 ORTHO05D006134 9.2e-20 100.9 105 55.2
Cfa026974 Carpinus fangiana HOM05D004410 ORTHO05D006134 2.7e-19 99.4 152 44.7
Atru.chr12.1677 Acer truncatum HOM05D004410 ORTHO05D006134 4.6e-19 98.6 119 47.1
CANSAT78G0925 Cannabis sativa HOM05D004410 ORTHO05D006134 6.0e-19 98.2 72 68.1
TAR383G0389 Trochodendron aralioides HOM05D004410 ORTHO05D006134 1.5e-17 93.6 70 65.7
BcaC05g27254 Brassica carinata HOM05D004410 ORTHO05D027626 2.5e-17 92.8 70 65.7
C03p79720 Brassica napus HOM05D004410 ORTHO05D027626 2.5e-17 92.8 70 65.7
BolC5t31886H Brassica oleracea HOM05D004410 ORTHO05D027626 2.5e-17 92.8 70 65.7
Glyma.17G179900 Glycine max HOM05D004410 ORTHO05D027626 1.3e-13 80.5 64 60.9
MCO02G313 Micromonas commoda HOM05D004410 ORTHO05D006134 1.1e-09 67.4 90 44.4
PSO210G2992 Papaver somniferum HOM05D004410 ORTHO05D006134 3.3e-09 65.9 50 66.0
PSO724G1151 Papaver somniferum HOM05D004410 ORTHO05D305184 4.7e-08 62.0 97 43.3


User provided reference genes

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