Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 9.9e-217 756.5 388 100.0
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 2.1e-134 483.0 388 68.3
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 2.9e-123 446.0 402 63.9
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 1.0e-120 437.6 383 63.7
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 3.8e-107 392.5 384 58.3
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 9.2e-106 387.9 390 55.4
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 4.2e-98 362.5 349 56.7
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 5.4e-98 362.1 379 54.4
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 2.1e-97 360.1 383 54.3
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 2.3e-96 356.7 389 54.2
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 2.8e-94 349.7 388 52.1
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 5.8e-92 342.0 409 51.8
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 9.9e-92 341.3 351 54.4
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 2.2e-91 340.1 405 50.9
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 4.9e-91 339.0 404 51.2
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 1.4e-90 337.4 405 51.4
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 3.2e-90 336.3 405 51.6
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 9.3e-90 334.7 398 51.8
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 6.0e-89 332.0 408 50.7
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 1.0e-88 331.3 388 50.0
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 6.7e-88 328.6 389 48.8
arahy.Tifrunner.gnm1.ann1.D4R6TJ Arachis hypogaea HOM05D007241 ORTHO05D009142 8.7e-88 328.2 427 47.5
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 8.7e-88 328.2 402 49.8
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 4.3e-87 325.9 418 49.3
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 5.6e-87 325.5 370 49.2
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 7.4e-87 325.1 405 49.4
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 2.1e-86 323.6 389 48.1
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 2.1e-86 323.6 390 47.9
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 6.2e-86 322.0 390 47.9
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 8.1e-86 321.6 382 51.0
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 1.1e-85 321.2 393 49.1
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 1.4e-85 320.9 390 46.9
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 3.1e-85 319.7 380 47.6
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 5.3e-85 318.9 390 46.9
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 5.3e-85 318.9 359 50.4
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 9.0e-85 318.2 389 49.4
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 1.2e-84 317.8 402 48.0
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 2.0e-84 317.0 374 51.1
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 2.0e-84 317.0 403 47.9
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 4.5e-84 315.8 362 50.0
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 4.5e-84 315.8 381 47.8
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 1.7e-83 313.9 391 47.3
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 1.7e-83 313.9 379 48.5
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 3.8e-83 312.8 386 47.4
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 4.9e-83 312.4 392 47.7
TPR.G8187 Trifolium pratense HOM05D007241 ORTHO05D009142 4.9e-83 312.4 397 51.1
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 6.4e-83 312.0 355 50.7
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 6.4e-83 312.0 384 48.4
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 6.4e-83 312.0 370 48.9
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 8.4e-83 311.6 384 48.7
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 8.4e-83 311.6 359 50.1
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 2.5e-82 310.1 389 48.3
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 4.2e-82 309.3 398 48.0
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 7.1e-82 308.5 383 48.0
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 9.3e-82 308.1 398 47.5
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 2.7e-81 306.6 382 47.9
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 3.5e-81 306.2 396 48.7
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 6.0e-81 305.4 365 48.8
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 6.0e-81 305.4 383 47.5
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 2.3e-80 303.5 399 46.9
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 3.9e-80 302.8 399 46.1
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 6.7e-80 302.0 367 48.5
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 1.5e-79 300.8 341 49.0
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 2.5e-79 300.1 392 46.9
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 3.3e-79 299.7 389 46.3
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 5.7e-79 298.9 391 47.1
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 1.3e-78 297.7 370 47.3
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 1.4e-77 294.3 385 47.8
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 2.4e-77 293.5 392 45.2
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 5.3e-77 292.4 405 46.7
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 5.3e-77 292.4 352 48.0
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 1.0e-75 288.1 401 45.1
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 2.9e-75 286.6 393 44.5
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 7.1e-74 282.0 374 46.0
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 4.6e-73 279.3 401 43.6
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 7.9e-73 278.5 394 43.4
DCAR_010398 Daucus carota HOM05D007241 ORTHO05D009142 3.0e-72 276.6 423 42.3
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 6.7e-72 275.4 387 44.4
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 8.7e-72 275.0 363 44.1
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 7.4e-71 271.9 345 46.1
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 3.7e-70 269.6 358 43.3
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 2.4e-69 266.9 367 46.0
arahy.Tifrunner.gnm1.ann1.4L01Q9 Arachis hypogaea HOM05D007241 ORTHO05D009142 9.0e-69 265.0 206 65.0
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 1.0e-67 261.5 356 44.4
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 1.3e-67 261.2 362 45.0
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 2.5e-66 256.9 363 41.3
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 4.2e-66 256.1 381 44.9
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 5.1e-64 249.2 381 42.5
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 7.7e-60 235.3 340 43.2
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 4.1e-53 213.0 302 41.1
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 1.7e-51 207.6 367 35.7
AUR62021204 Chenopodium quinoa HOM05D007241 ORTHO05D009142 3.2e-50 203.4 370 40.0
CDE04G1578 Ceratophyllum demersum HOM05D007241 ORTHO05D009142 3.3e-47 193.4 210 50.0
Zm00001eb063100 Zea mays HOM05D007241 ORTHO05D009142 1.7e-43 181.0 345 34.5
TPR.G40038 Trifolium pratense HOM05D007241 ORTHO05D009142 4.5e-36 156.4 96 76.0
COL.COLO4_14646 Corchorus olitorius HOM05D007241 ORTHO05D009142 1.6e-28 131.3 135 60.0
Lj3A958T74 Lonicera japonica HOM05D007241 ORTHO05D009142 6.1e-25 119.4 145 49.7
MD12G1157800 Malus domestica HOM05D007241 ORTHO05D009142 6.3e-22 109.4 110 52.7
Mapoly0003s0142 Marchantia polymorpha HOM05D007241 ORTHO05D009142 1.4e-21 108.2 343 27.4
COL.COLO4_14645 Corchorus olitorius HOM05D007241 ORTHO05D009142 2.7e-20 104.0 134 50.7
Lj3A958T75 Lonicera japonica HOM05D007241 ORTHO05D009142 9.5e-18 95.5 117 48.7
Pp3c24_19950 Physcomitrium patens HOM05D007241 ORTHO05D009142 8.0e-17 92.4 344 24.7
BcaB05g24622 Brassica carinata HOM05D007241 ORTHO05D009142 2.0e-15 87.8 129 43.4
CBR_g25746 Chara braunii HOM05D000019 ORTHO05D000048 5.0e-11 73.2 358 21.2
SEGI_13087 Sequoiadendron giganteum HOM05D007241 ORTHO05D009142 8.6e-11 72.4 87 41.4
TAR629G1375 Trochodendron aralioides HOM05D007241 ORTHO05D009142 6.8e-08 62.8 62 48.4


User provided reference genes

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