Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19986_v3 Cicer arietinum L. HOM05D005507 ORTHO05D007316 4.5e-65 251.1 129 100.0
Ca_19991_v3 Cicer arietinum L. HOM05D005507 ORTHO05D007316 3.7e-51 204.9 117 88.9
TPR.G5632 Trifolium pratense HOM05D005507 ORTHO05D007316 1.2e-46 189.9 117 82.9
Medtr4g021750 Medicago truncatula HOM05D005507 ORTHO05D007316 5.2e-45 184.5 117 80.3
Lj3g0017176 Lotus japonicus HOM05D005507 ORTHO05D007316 1.2e-44 183.3 117 79.5
VMungo0331G0190 Vigna mungo HOM05D005507 ORTHO05D007316 2.6e-44 182.2 117 79.5
Glyma.18G153300 Glycine max HOM05D005507 ORTHO05D007316 1.3e-43 179.9 117 79.5
Phvul.010G010050 Phaseolus vulgaris HOM05D005507 ORTHO05D007316 1.3e-43 179.9 117 77.8
arahy.Tifrunner.gnm1.ann1.128L9Z Arachis hypogaea HOM05D005507 ORTHO05D007316 2.8e-43 178.7 117 76.1
arahy.Tifrunner.gnm1.ann1.CQ4D9K Arachis hypogaea HOM05D005507 ORTHO05D007316 2.8e-43 178.7 117 76.1
Lalb_Chr07g0193881 Lupinus albus HOM05D005507 ORTHO05D007316 7.0e-42 174.1 113 78.8
Lalb_Chr12g0209571 Lupinus albus HOM05D005507 ORTHO05D007316 2.7e-41 172.2 117 74.4
GSVIVG01034161001 Vitis vinifera HOM05D005507 ORTHO05D007316 1.3e-40 169.9 113 73.5
QL07p048577 Quercus lobata HOM05D005507 ORTHO05D007316 3.8e-40 168.3 119 70.6
FvH4_6g13600 Fragaria vesca HOM05D005507 ORTHO05D007316 8.5e-40 167.2 117 70.9
FAN14G4006 Fragaria x ananassa HOM05D005507 ORTHO05D007316 8.5e-40 167.2 117 70.9
Gohir.D09G151000 Gossypium hirsutum HOM05D005507 ORTHO05D007316 8.5e-40 167.2 120 70.0
Gorai.006G172300 Gossypium raimondii HOM05D005507 ORTHO05D007316 8.5e-40 167.2 120 70.0
Potri.006G086200 Populus trichocarpa HOM05D005507 ORTHO05D007316 8.5e-40 167.2 120 69.2
MD04G1129900 Malus domestica HOM05D005507 ORTHO05D007316 1.1e-39 166.8 117 69.2
MD12G1143000 Malus domestica HOM05D005507 ORTHO05D007316 1.9e-39 166.0 117 70.9
Manes.08G080700 Manihot esculenta HOM05D005507 ORTHO05D007316 1.9e-39 166.0 121 68.6
Sabra06G0065800 Salix brachista HOM05D005507 ORTHO05D007316 1.9e-39 166.0 120 69.2
FAN09G0180 Fragaria x ananassa HOM05D005507 ORTHO05D007316 2.5e-39 165.6 117 70.1
Cfa017367 Carpinus fangiana HOM05D005507 ORTHO05D007316 3.2e-39 165.2 120 68.3
CiPaw.09G193400 Carya illinoinensis HOM05D005507 ORTHO05D007316 4.2e-39 164.9 120 69.2
Gohir.A09G155500 Gossypium hirsutum HOM05D005507 ORTHO05D007316 7.2e-39 164.1 120 68.3
Sed0014596 Sechium edule HOM05D005507 ORTHO05D007316 1.2e-38 163.3 112 69.6
ClCG04G008130 Citrullus lanatus HOM05D005507 ORTHO05D007316 1.6e-38 162.9 112 68.8
CSS0025531 Camellia sinensis var. sinensis HOM05D005507 ORTHO05D007316 3.6e-38 161.8 117 68.4
Thecc.05G038400 Theobroma cacao HOM05D005507 ORTHO05D007316 3.6e-38 161.8 120 67.5
Cpa.g.sc188.6 Carica papaya HOM05D005507 ORTHO05D007316 8.0e-38 160.6 113 68.1
CsaV3_4G025060 Cucumis sativus L. HOM05D005507 ORTHO05D007316 1.0e-37 160.2 112 67.0
TAR623G0024 Trochodendron aralioides HOM05D005507 ORTHO05D007316 1.0e-37 160.2 117 66.7
Eucgr.A01270 Eucalyptus grandis HOM05D005507 ORTHO05D007316 1.8e-37 159.5 114 66.7
Nn2g11133 Nelumbo nucifera HOM05D005507 ORTHO05D007316 1.8e-37 159.5 117 65.8
vmacro20162 Vaccinium macrocarpon HOM05D005507 ORTHO05D007316 2.3e-37 159.1 117 68.4
MSTRG.19080 Avicennia marina HOM05D005507 ORTHO05D007316 3.0e-37 158.7 112 68.8
Dinv37165 Davidia involucrata HOM05D005507 ORTHO05D007316 3.0e-37 158.7 117 66.7
MELO3C003135.2 Cucumis melo HOM05D005507 ORTHO05D007316 5.2e-37 157.9 112 66.1
Hma1.2p1_0936F.1_g238770 Hydrangea macrophylla HOM05D005507 ORTHO05D007316 6.8e-37 157.5 113 68.1
Rhsim05G0193600 Rhododendron simsii HOM05D005507 ORTHO05D007316 1.5e-36 156.4 112 71.4
SalBow3G2672 Salvia bowleyana HOM05D005507 ORTHO05D007316 1.5e-36 156.4 117 63.2
Actinidia11260 Actinidia chinensis HOM05D005507 ORTHO05D007316 2.0e-36 156.0 114 64.9
TAR633G0577 Trochodendron aralioides HOM05D005507 ORTHO05D007316 2.0e-36 156.0 117 65.0
PSO151G0160 Papaver somniferum HOM05D005507 ORTHO05D007316 2.6e-36 155.6 113 66.4
THA.LOC104816267 Tarenaya hassleriana HOM05D005507 ORTHO05D007316 2.6e-36 155.6 113 64.6
Haze_20804 Corylus avellana HOM05D005507 ORTHO05D007316 3.4e-36 155.2 127 63.8
MBI14_g36928_MAGBIO Magnolia biondii HOM05D005507 ORTHO05D007316 4.4e-36 154.8 117 65.8
Cc06_g02560 Coffea canephora HOM05D005507 ORTHO05D007316 5.7e-36 154.5 113 66.4
Migut.J00324 Erythranthe guttata HOM05D005507 ORTHO05D007316 5.7e-36 154.5 116 64.7
Aqoxy2G02218 Aquilegia oxysepala HOM05D005507 ORTHO05D007316 7.5e-36 154.1 113 67.3
CANSAT35G1404 Cannabis sativa HOM05D005507 ORTHO05D007316 9.8e-36 153.7 117 65.8
PGR004G0811 Punica granatum HOM05D005507 ORTHO05D007316 9.8e-36 153.7 117 65.8
CAN.G499.3 Capsicum annuum HOM05D005507 ORTHO05D007316 1.3e-35 153.3 117 65.0
Nitab4.5_0011443g0010 Nicotiana tabacum HOM05D005507 ORTHO05D007316 1.3e-35 153.3 116 65.5
Peaxi162Scf00165g01015 Petunia axillaris HOM05D005507 ORTHO05D007316 1.7e-35 152.9 116 64.7
Oeu024341.2 Olea europaea HOM05D005507 ORTHO05D007316 2.2e-35 152.5 117 64.1
Sc07g0007070 Simmondsia chinensis HOM05D005507 ORTHO05D007316 3.7e-35 151.8 113 63.7
Nitab4.5_0000705g0210 Nicotiana tabacum HOM05D005507 ORTHO05D007316 4.8e-35 151.4 115 64.3
HanXRQChr04g0125471 Helianthus annuus HOM05D005507 ORTHO05D007316 8.3e-35 150.6 114 64.0
Solyc09g010870.4 Solanum lycopersicum HOM05D005507 ORTHO05D007316 8.3e-35 150.6 117 64.1
Thhalv10012718m.g Eutrema salsugineum HOM05D005507 ORTHO05D007316 1.1e-34 150.2 113 63.7
PGSC0003DMG400008832 Solanum tuberosum HOM05D005507 ORTHO05D007316 1.4e-34 149.8 117 64.1
Ciclev10011102m.g Citrus clementina HOM05D005507 ORTHO05D007316 1.8e-34 149.4 120 60.8
Aa31LG1G22500 Aethionema arabicum HOM05D005507 ORTHO05D007316 2.4e-34 149.1 113 64.6
Sopen09g005610 Solanum pennellii HOM05D005507 ORTHO05D007316 2.4e-34 149.1 117 63.2
TWI53G1275 Tripterygium wilfordii HOM05D005507 ORTHO05D007316 2.4e-34 149.1 113 62.8
Lj2A93G83 Lonicera japonica HOM05D005507 ORTHO05D007316 3.1e-34 148.7 116 62.9
Psat5g035720 Pisum sativum HOM05D005507 ORTHO05D007316 3.1e-34 148.7 87 81.6
Sp6g40200 Schrenkiella parvula HOM05D005507 ORTHO05D007316 4.1e-34 148.3 113 61.1
Hund10642 Selenicereus undatus HOM05D005507 ORTHO05D007316 4.1e-34 148.3 108 68.5
SGA_v2.0_scaffold75G24953 Striga asiatica HOM05D005507 ORTHO05D007316 4.1e-34 148.3 112 65.2
CARHR211120 Cardamine hirsuta HOM05D005507 ORTHO05D007316 7.0e-34 147.5 113 62.8
PSO339G2235 Papaver somniferum HOM05D005507 ORTHO05D007316 7.0e-34 147.5 113 62.8
Carub.0006s0109 Capsella rubella HOM05D005507 ORTHO05D007316 9.1e-34 147.1 113 62.8
AUR62025794 Chenopodium quinoa HOM05D005507 ORTHO05D007316 9.1e-34 147.1 117 60.7
AUR62038110 Chenopodium quinoa HOM05D005507 ORTHO05D007316 9.1e-34 147.1 117 60.7
AL6G11510 Arabidopsis lyrata HOM05D005507 ORTHO05D007316 1.6e-33 146.4 113 62.8
C09p74280 Brassica napus HOM05D005507 ORTHO05D007316 1.6e-33 146.4 113 62.8
BolC9t60161H Brassica oleracea HOM05D005507 ORTHO05D007316 1.6e-33 146.4 113 62.8
FAN02G3281 Fragaria x ananassa HOM05D005507 ORTHO05D007316 1.6e-33 146.4 145 54.5
AT5G02250 Arabidopsis thaliana HOM05D005507 ORTHO05D007316 2.7e-33 145.6 113 60.2
EL10As1g23037 Beta vulgaris HOM05D005507 ORTHO05D007316 3.5e-33 145.2 113 61.1
Lsat_1_v5_gn_8_85360 Lactuca sativa HOM05D005507 ORTHO05D007316 3.5e-33 145.2 114 61.4
BraA10t45368Z Brassica rapa HOM05D005507 ORTHO05D007316 4.5e-33 144.8 113 61.9
Atru.chr8.1984 Acer truncatum HOM05D005507 ORTHO05D007316 1.0e-32 143.7 113 59.3
A10p33370 Brassica napus HOM05D005507 ORTHO05D007316 1.0e-32 143.7 113 61.9
ECA236G2467 Erigeron canadensis HOM05D005507 ORTHO05D007316 1.0e-32 143.7 121 59.5
CDE07G0172 Ceratophyllum demersum HOM05D005507 ORTHO05D007316 2.3e-32 142.5 117 58.1
Ah.08g210340 Amaranthus hybridus HOM05D005507 ORTHO05D007316 3.8e-32 141.7 116 59.5
CDE04G1833 Ceratophyllum demersum HOM05D005507 ORTHO05D007316 8.6e-32 140.6 117 58.1
DCAR_028747 Daucus carota HOM05D005507 ORTHO05D007316 4.2e-31 138.3 110 60.9
HPP92_018140 Vanilla planifolia HOM05D005507 ORTHO05D007316 4.2e-31 138.3 113 59.3
ATR0559G008 Amborella trichopoda HOM05D005507 ORTHO05D007316 1.2e-30 136.7 117 58.1
Psat7g235360 Pisum sativum HOM05D005507 ORTHO05D007316 1.2e-28 130.2 73 86.3
Lj3C966G5 Lonicera japonica HOM05D005507 ORTHO05D007316 2.0e-28 129.4 112 58.0
Prupe.6G256600 Prunus persica HOM05D005507 ORTHO05D007316 1.8e-26 122.9 84 71.4
Os01g0841800 Oryza sativa ssp. japonica HOM05D005507 ORTHO05D007316 5.4e-26 121.3 113 54.9
Zm00001eb148300 Zea mays HOM05D005507 ORTHO05D007316 7.8e-25 117.5 113 54.9
RcHm_v2.0_Chr3g0466451 Rosa chinensis HOM05D005507 ORTHO05D007316 1.3e-24 116.7 117 53.8
Pp3c14_20610 Physcomitrium patens HOM05D005507 ORTHO05D007316 2.4e-18 95.9 111 47.7
Psat6g176160 Pisum sativum HOM05D005507 ORTHO05D007316 6.6e-16 87.8 49 83.7
PSO170G4202 Papaver somniferum HOM05D005507 ORTHO05D007316 8.6e-16 87.4 65 61.5
AagrBONN_evm.TU.Sc2ySwM_362.2750 Anthoceros agrestis HOM05D005507 ORTHO05D007316 1.5e-15 86.7 112 39.3
unitig_578.g15691 Utricularia gibba HOM05D005507 ORTHO05D007316 7.3e-15 84.3 69 60.9
Mapoly0006s0179 Marchantia polymorpha HOM05D005507 ORTHO05D007316 9.5e-15 84.0 112 38.4
SMO119G0389 Selaginella moellendorffii HOM05D005507 ORTHO05D007316 1.3e-11 73.6 112 34.8
COL.COLO4_14788 Corchorus olitorius HOM05D005507 ORTHO05D007316 4.1e-10 68.6 62 54.8
CBR_g72631 Chara braunii HOM05D005507 ORTHO05D007316 1.2e-09 67.0 113 35.4
Ca_27727_v3 Cicer arietinum L. HOM05D005507 ORTHO05D025048 4.6e-09 65.1 35 91.4


User provided reference genes

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