Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19355_v3 Cicer arietinum L. HOM05D001165 ORTHO05D001347 1.4e-108 396.4 211 100.0
Ca_24958_v3 Cicer arietinum L. HOM05D001165 ORTHO05D001347 1.8e-18 97.1 57 86.0
TPR.G25144 Trifolium pratense HOM05D001165 ORTHO05D001347 9.1e-15 84.7 59 69.5
Medtr7g007090 Medicago truncatula HOM05D001165 ORTHO05D001347 3.8e-13 79.3 57 66.7
Medtr6g084890 Medicago truncatula HOM05D001165 ORTHO05D001347 8.5e-13 78.2 57 66.7
Medtr5g023660 Medicago truncatula HOM05D001165 ORTHO05D001347 1.1e-12 77.8 57 64.9
Lalb_Chr09g0321331 Lupinus albus HOM05D001165 ORTHO05D001347 2.5e-12 76.6 59 66.1
Phvul.002G113900 Phaseolus vulgaris HOM05D001165 ORTHO05D001347 2.5e-12 76.6 58 63.8
TAR369G1100 Trochodendron aralioides HOM05D001165 ORTHO05D001347 2.5e-12 76.6 59 55.9
Atru.chr6.2999 Acer truncatum HOM05D001165 ORTHO05D001347 9.4e-12 74.7 59 55.9
Glyma.11G083600 Glycine max HOM05D001165 ORTHO05D001347 2.7e-11 73.2 59 62.7
Lj2g0018357 Lotus japonicus HOM05D001165 ORTHO05D001347 2.7e-11 73.2 59 61.0
QL06p052529 Quercus lobata HOM05D001165 ORTHO05D001347 2.7e-11 73.2 59 59.3
GSVIVG01033464001 Vitis vinifera HOM05D001165 ORTHO05D001347 2.7e-11 73.2 64 57.8
Medtr4g017850 Medicago truncatula HOM05D001165 ORTHO05D001347 4.7e-11 72.4 57 59.6
Psat2g130080 Pisum sativum HOM05D001165 ORTHO05D001347 8.0e-11 71.6 59 62.7
VMungo1215G1000 Vigna mungo HOM05D001165 ORTHO05D001347 8.0e-11 71.6 58 60.3
CANSAT64G0692 Cannabis sativa HOM05D001165 ORTHO05D001347 1.4e-10 70.9 71 45.1
Glyma.01G160300 Glycine max HOM05D001165 ORTHO05D001347 2.3e-10 70.1 59 61.0
TPR.G19244 Trifolium pratense HOM05D001165 ORTHO05D001347 2.3e-10 70.1 59 57.6
Ca_19888_v3 Cicer arietinum L. HOM05D000326 ORTHO05D001347 4.0e-10 69.3 41 82.9
THA.LOC104809536 Tarenaya hassleriana HOM05D001165 ORTHO05D001347 5.2e-10 68.9 63 55.6
TAR633G2726 Trochodendron aralioides HOM05D001165 ORTHO05D001347 8.8e-10 68.2 58 50.0
Medtr6g037900 Medicago truncatula HOM05D001165 ORTHO05D001347 1.5e-09 67.4 57 54.4
Ca_03267_v3 Cicer arietinum L. HOM05D001165 ORTHO05D001347 2.0e-09 67.0 57 64.9
Hund16326 Selenicereus undatus HOM05D001165 ORTHO05D001347 2.0e-09 67.0 59 55.9
Ciclev10000251m.g Citrus clementina HOM05D001165 ORTHO05D001347 3.4e-09 66.2 59 54.2
Manes.09G037800 Manihot esculenta HOM05D001165 ORTHO05D001347 4.4e-09 65.9 59 50.8
Dinv24043 Davidia involucrata HOM05D001165 ORTHO05D001347 7.5e-09 65.1 58 55.2
Lsat_1_v5_gn_6_36561 Lactuca sativa HOM05D001165 ORTHO05D001347 1.7e-08 63.9 59 54.2
MELO3C015649.2 Cucumis melo HOM05D001165 ORTHO05D001347 2.2e-08 63.5 56 46.4
Nn1g02006 Nelumbo nucifera HOM05D001165 ORTHO05D001347 2.2e-08 63.5 57 54.4
Solyc01g006100.4 Solanum lycopersicum HOM05D001165 ORTHO05D001347 3.7e-08 62.8 61 50.8
Solyc12g100330.2 Solanum lycopersicum HOM05D001165 ORTHO05D001347 4.8e-08 62.4 61 47.5
Sopen12g034960 Solanum pennellii HOM05D001165 ORTHO05D001347 4.8e-08 62.4 61 47.5
Aqoxy6G02964 Aquilegia oxysepala HOM05D001165 ORTHO05D001347 6.3e-08 62.0 58 51.7
Cpa.g.sc27.168 Carica papaya HOM05D001165 ORTHO05D001347 6.3e-08 62.0 59 54.2
CDE05G1370 Ceratophyllum demersum HOM05D001165 ORTHO05D001347 6.3e-08 62.0 58 53.4
CAN.G575.11 Capsicum annuum HOM05D001165 ORTHO05D001347 8.3e-08 61.6 61 47.5
Nn2g15742 Nelumbo nucifera HOM05D001165 ORTHO05D001347 8.3e-08 61.6 58 48.3
Thecc.02G019200 Theobroma cacao HOM05D001165 ORTHO05D001347 1.1e-07 61.2 58 46.6
Aqoxy3G02035 Aquilegia oxysepala HOM05D001165 ORTHO05D001347 1.4e-07 60.8 59 49.2
Aqoxy4G01202 Aquilegia oxysepala HOM05D001165 ORTHO05D001347 1.8e-07 60.5 59 47.5
Actinidia38596 Actinidia chinensis HOM05D001165 ORTHO05D001347 2.4e-07 60.1 74 44.6
ATR0829G097 Amborella trichopoda HOM05D001165 ORTHO05D001347 2.4e-07 60.1 48 60.4
GSVIVG01025386001 Vitis vinifera HOM05D001165 ORTHO05D001347 2.4e-07 60.1 58 46.6
Aqoxy2G04079 Aquilegia oxysepala HOM05D001165 ORTHO05D001347 3.1e-07 59.7 59 47.5
arahy.Tifrunner.gnm1.ann1.QU6E8I Arachis hypogaea HOM05D001165 ORTHO05D001347 3.1e-07 59.7 65 50.8
arahy.Tifrunner.gnm1.ann1.VQI5ED Arachis hypogaea HOM05D001165 ORTHO05D001347 3.1e-07 59.7 65 50.8
CsaV3_1G042250 Cucumis sativus L. HOM05D001165 ORTHO05D001347 3.1e-07 59.7 56 44.6
Gohir.D01G174400 Gossypium hirsutum HOM05D001165 ORTHO05D001347 3.1e-07 59.7 63 46.0
Gorai.002G216500 Gossypium raimondii HOM05D001165 ORTHO05D001347 3.1e-07 59.7 63 46.0
Sopen01g002100 Solanum pennellii HOM05D001165 ORTHO05D001347 3.1e-07 59.7 61 49.2
Gohir.A01G183300 Gossypium hirsutum HOM05D001165 ORTHO05D001347 4.1e-07 59.3 63 44.4
Lsat_1_v5_gn_2_113601 Lactuca sativa HOM05D001165 ORTHO05D001347 4.1e-07 59.3 56 53.6
Lsat_1_v5_gn_7_26800 Lactuca sativa HOM05D001165 ORTHO05D001347 4.1e-07 59.3 56 53.6
Lj3C889T12 Lonicera japonica HOM05D001165 ORTHO05D001347 4.1e-07 59.3 57 52.6
TAR374G0107 Trochodendron aralioides HOM05D001165 ORTHO05D001347 4.1e-07 59.3 57 49.1
Duzib205G0564 Durio zibethinus HOM05D001165 ORTHO05D001347 5.4e-07 58.9 58 44.8
Sc19g0000230 Simmondsia chinensis HOM05D001165 ORTHO05D001347 5.4e-07 58.9 48 58.3
PGSC0003DMG400004285 Solanum tuberosum HOM05D001165 ORTHO05D001347 5.4e-07 58.9 61 44.3
Aqoxy1G04090 Aquilegia oxysepala HOM05D001165 ORTHO05D001347 7.0e-07 58.5 59 52.5
Aqoxy4G00400 Aquilegia oxysepala HOM05D001165 ORTHO05D001347 7.0e-07 58.5 51 52.9
Lalb_Chr16g0377271 Lupinus albus HOM05D001165 ORTHO05D001347 7.0e-07 58.5 39 69.2
Manes.17G009250 Manihot esculenta HOM05D001165 ORTHO05D001347 7.0e-07 58.5 86 34.9
SGA_v2.0_scaffold18G08504 Striga asiatica HOM05D001165 ORTHO05D001347 7.0e-07 58.5 57 50.9
Lsat_1_v5_gn_3_37841 Lactuca sativa HOM05D001165 ORTHO05D001347 9.1e-07 58.2 56 51.8
EL10Ac3g05097 Beta vulgaris HOM05D001165 ORTHO05D001347 1.2e-06 57.8 57 45.6
Dinv13422 Davidia involucrata HOM05D001165 ORTHO05D001347 1.2e-06 57.8 58 50.0
C05p09630 Brassica napus HOM05D001165 ORTHO05D001347 1.6e-06 57.4 64 45.3
BolC5t29705H Brassica oleracea HOM05D001165 ORTHO05D001347 1.6e-06 57.4 64 45.3
AUR62028152 Chenopodium quinoa HOM05D001165 ORTHO05D001347 1.6e-06 57.4 57 47.4
DCAR_006422 Daucus carota HOM05D001165 ORTHO05D001347 1.6e-06 57.4 58 46.6
Hund21648 Selenicereus undatus HOM05D001165 ORTHO05D001347 1.6e-06 57.4 58 43.1
Gohir.A07G044300 Gossypium hirsutum HOM05D001165 ORTHO05D001347 2.0e-06 57.0 58 44.8
Gohir.D07G048800 Gossypium hirsutum HOM05D001165 ORTHO05D001347 2.0e-06 57.0 58 44.8
Gorai.001G052000 Gossypium raimondii HOM05D001165 ORTHO05D001347 2.0e-06 57.0 58 44.8
Ah.04g157270 Amaranthus hybridus HOM05D001165 ORTHO05D001347 3.5e-06 56.2 57 47.4
ATR0598G105 Amborella trichopoda HOM05D001165 ORTHO05D001347 3.5e-06 56.2 57 49.1
Cfa009624 Carpinus fangiana HOM05D001165 ORTHO05D001347 3.5e-06 56.2 58 44.8
ClCG03G013970 Citrullus lanatus HOM05D001165 ORTHO05D001347 3.5e-06 56.2 58 43.1
Lj1C1132T6 Lonicera japonica HOM05D001165 ORTHO05D001347 3.5e-06 56.2 61 45.9
GSVIVG01024446001 Vitis vinifera HOM05D001165 ORTHO05D001347 3.5e-06 56.2 59 47.5
Ah.06g193090 Amaranthus hybridus HOM05D001165 ORTHO05D001347 4.5e-06 55.8 52 44.2
A06p08030 Brassica napus HOM05D001165 ORTHO05D001347 4.5e-06 55.8 64 43.8
BraA06t24002Z Brassica rapa HOM05D001165 ORTHO05D001347 4.5e-06 55.8 64 43.8
ECA240G3224 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.5e-06 55.8 59 50.8
PGR031G1844 Punica granatum HOM05D001165 ORTHO05D001347 4.5e-06 55.8 57 40.4
CSS0013017 Camellia sinensis var. sinensis HOM05D001165 ORTHO05D001347 5.9e-06 55.5 58 50.0
AUR62001932 Chenopodium quinoa HOM05D001165 ORTHO05D001347 5.9e-06 55.5 57 52.6
AUR62003878 Chenopodium quinoa HOM05D001165 ORTHO05D001347 5.9e-06 55.5 57 52.6
Thhalv10006850m.g Eutrema salsugineum HOM05D001165 ORTHO05D001347 5.9e-06 55.5 58 44.8
MBI13_g29649_MAGBIO Magnolia biondii HOM05D001165 ORTHO05D001347 5.9e-06 55.5 49 55.1
Sed0004362 Sechium edule HOM05D001165 ORTHO05D001347 5.9e-06 55.5 58 41.4
Thecc.09G214800 Theobroma cacao HOM05D001165 ORTHO05D001347 5.9e-06 55.5 58 44.8
Aa31LG2G9200 Aethionema arabicum HOM05D001165 ORTHO05D001347 7.7e-06 55.1 59 44.1
Ciclev10000487m.g Citrus clementina HOM05D001165 ORTHO05D001347 7.7e-06 55.1 57 42.1
HanXRQChr02g0054041 Helianthus annuus HOM05D001165 ORTHO05D001347 7.7e-06 55.1 59 47.5
PGR119G1059 Punica granatum HOM05D001165 ORTHO05D001347 7.7e-06 55.1 57 49.1


User provided reference genes

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