Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15283_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 2.0e-138 495.7 250 100.0
Ca_15419_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 2.0e-138 495.7 250 100.0
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 1.9e-59 233.4 240 59.2
Phvul.009G117500 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 6.1e-50 201.8 261 49.0
VMungo1309G0350 Vigna mungo HOM05D003719 ORTHO05D004116 6.5e-44 181.8 256 47.3
Prupe.2G107000 Prunus persica HOM05D003719 ORTHO05D004116 5.7e-40 168.7 301 40.5
Psat5g001120 Pisum sativum HOM05D003719 ORTHO05D004116 9.1e-38 161.4 237 48.9
arahy.Tifrunner.gnm1.ann1.N569AS Arachis hypogaea HOM05D003719 ORTHO05D004116 2.2e-36 156.8 282 42.6
arahy.Tifrunner.gnm1.ann1.U92JU2 Arachis hypogaea HOM05D003719 ORTHO05D004116 2.2e-36 156.8 282 42.9
Glyma.16G079900 Glycine max HOM05D003719 ORTHO05D004116 3.8e-36 156.0 284 40.5
Phvul.010G034600 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 4.2e-35 152.5 287 41.5
FAN10G3972 Fragaria x ananassa HOM05D003719 ORTHO05D004116 5.5e-35 152.1 301 38.9
RcHm_v2.0_Chr1g0340791 Rosa chinensis HOM05D003719 ORTHO05D004116 9.4e-35 151.4 291 40.2
FvH4_7g08280 Fragaria vesca HOM05D003719 ORTHO05D004116 1.2e-34 151.0 291 38.8
FAN06G0622 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.1e-34 150.2 301 38.2
Glyma.03G094200 Glycine max HOM05D003719 ORTHO05D004116 2.1e-34 150.2 284 39.8
QL04p053441 Quercus lobata HOM05D003719 ORTHO05D004116 1.1e-32 144.4 250 42.4
VMungo0331G0617 Vigna mungo HOM05D003719 ORTHO05D004116 1.5e-32 144.1 285 40.4
Haze_15777 Corylus avellana HOM05D003719 ORTHO05D004116 5.7e-32 142.1 289 38.8
Glyma.04G002100 Glycine max HOM05D003719 ORTHO05D004116 5.7e-32 142.1 238 46.6
Lj3g0017682 Lotus japonicus HOM05D003719 ORTHO05D004116 2.8e-31 139.8 282 35.8
MD07G1081800 Malus domestica HOM05D003719 ORTHO05D004116 4.8e-31 139.0 290 38.3
Cpa.g.sc73.30 Carica papaya HOM05D003719 ORTHO05D004116 8.2e-31 138.3 283 39.2
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 2.4e-30 136.7 261 35.6
Gorai.007G347200 Gossypium raimondii HOM05D003719 ORTHO05D004116 1.6e-29 134.0 289 37.7
Gohir.D11G317400 Gossypium hirsutum HOM05D003719 ORTHO05D004116 2.0e-29 133.7 289 37.7
TAR629G0070 Trochodendron aralioides HOM05D003719 ORTHO05D004116 2.6e-29 133.3 272 36.8
CiPaw.02G047600 Carya illinoinensis HOM05D003719 ORTHO05D004116 3.5e-29 132.9 286 36.7
Gohir.A11G301800 Gossypium hirsutum HOM05D003719 ORTHO05D004116 3.5e-29 132.9 289 37.0
MD02G1231000 Malus domestica HOM05D003719 ORTHO05D004116 5.9e-29 132.1 297 36.0
Glyma.06G001700 Glycine max HOM05D003719 ORTHO05D004116 1.0e-28 131.3 237 46.8
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 1.7e-28 130.6 283 35.0
Potri.013G070400 Populus trichocarpa HOM05D003719 ORTHO05D004116 3.8e-28 129.4 297 34.3
Thecc.05G235300 Theobroma cacao HOM05D003719 ORTHO05D004116 5.0e-28 129.0 291 37.1
CANSAT25G2268 Cannabis sativa HOM05D003719 ORTHO05D004116 6.5e-28 128.6 285 36.1
Duzib177G0203 Durio zibethinus HOM05D003719 ORTHO05D004116 6.5e-28 128.6 295 38.6
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 6.5e-28 128.6 290 36.9
ClCG06G000580 Citrullus lanatus HOM05D003719 ORTHO05D004116 1.5e-27 127.5 294 35.7
Duzib128G0107 Durio zibethinus HOM05D003719 ORTHO05D004116 1.9e-27 127.1 287 37.3
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 2.5e-27 126.7 288 38.9
Lalb_Chr07g0194591 Lupinus albus HOM05D003719 ORTHO05D004116 5.5e-27 125.6 279 33.0
Hma1.2p1_0128F.1_g060060 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 2.7e-26 123.2 277 34.3
Nitab4.5_0000050g0180 Nicotiana tabacum HOM05D003719 ORTHO05D004116 2.7e-26 123.2 283 36.0
Nitab4.5_0003123g0030 Nicotiana tabacum HOM05D003719 ORTHO05D004116 2.7e-26 123.2 285 35.8
Nitab4.5_0000792g0110 Nicotiana tabacum HOM05D003719 ORTHO05D004116 4.7e-26 122.5 269 36.1
Lalb_Chr13g0290971 Lupinus albus HOM05D003719 ORTHO05D004116 1.0e-25 121.3 279 32.3
Sabra13G0061200 Salix brachista HOM05D003719 ORTHO05D004116 1.0e-25 121.3 283 35.7
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 1.0e-25 121.3 286 36.4
Ciclev10031549m.g Citrus clementina HOM05D003719 ORTHO05D004116 1.8e-25 120.6 282 37.9
Sed0010466 Sechium edule HOM05D003719 ORTHO05D004116 2.3e-25 120.2 289 34.6
Peaxi162Scf00245g00417 Petunia axillaris HOM05D003719 ORTHO05D004116 3.0e-25 119.8 285 35.4
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 3.0e-25 119.8 259 36.3
CsaV3_6G006350 Cucumis sativus L. HOM05D003719 ORTHO05D004116 6.7e-25 118.6 294 33.7
MELO3C022484.2 Cucumis melo HOM05D003719 ORTHO05D004116 1.2e-24 117.9 294 33.3
Dinv43958 Davidia involucrata HOM05D003719 ORTHO05D004116 1.5e-24 117.5 289 34.6
Atru.chr2.1627 Acer truncatum HOM05D003719 ORTHO05D004116 2.0e-24 117.1 288 36.8
Potri.019G044400 Populus trichocarpa HOM05D003719 ORTHO05D004116 2.0e-24 117.1 287 35.5
Nitab4.5_0025236g0010 Nicotiana tabacum HOM05D003719 ORTHO05D004116 3.3e-24 116.3 268 34.7
PGR042G1172 Punica granatum HOM05D003719 ORTHO05D004116 9.7e-24 114.8 264 39.0
FAN03G1006 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.8e-23 113.2 275 36.0
Sopen01g033060 Solanum pennellii HOM05D003719 ORTHO05D004116 3.7e-23 112.8 256 34.8
Lalb_Chr23g0264911 Lupinus albus HOM05D003719 ORTHO05D004116 4.8e-23 112.5 252 36.1
Oeu020240.1 Olea europaea HOM05D003719 ORTHO05D004116 4.8e-23 112.5 281 31.3
Solyc01g081500.4 Solanum lycopersicum HOM05D003719 ORTHO05D004116 4.8e-23 112.5 256 34.8
Eucgr.E01743 Eucalyptus grandis HOM05D003719 ORTHO05D004116 6.3e-23 112.1 290 36.9
GSVIVG01019328001 Vitis vinifera HOM05D003719 ORTHO05D004116 6.3e-23 112.1 273 35.2
Migut.N01648 Erythranthe guttata HOM05D003719 ORTHO05D004116 8.2e-23 111.7 292 33.6
Cc02_g26500 Coffea canephora HOM05D003719 ORTHO05D004116 1.1e-22 111.3 279 32.3
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 1.4e-22 110.9 250 35.2
PGSC0003DMG400031112 Solanum tuberosum HOM05D003719 ORTHO05D004116 1.4e-22 110.9 266 34.6
Actinidia05832 Actinidia chinensis HOM05D003719 ORTHO05D004116 1.8e-22 110.5 284 34.5
Peaxi162Scf00907g00023 Petunia axillaris HOM05D003719 ORTHO05D004116 2.4e-22 110.2 273 33.3
MSTRG.4990 Avicennia marina HOM05D003719 ORTHO05D004116 4.1e-22 109.4 285 31.2
Actinidia31730 Actinidia chinensis HOM05D003719 ORTHO05D004116 1.2e-21 107.8 281 34.2
THA.LOC104827246 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 7.7e-21 105.1 281 35.6
Sed0012975 Sechium edule HOM05D003719 ORTHO05D004116 2.9e-20 103.2 291 30.2
MBI04_g06283_MAGBIO Magnolia biondii HOM05D003719 ORTHO05D004116 1.1e-19 101.3 282 33.3
AUR62038028 Chenopodium quinoa HOM05D003719 ORTHO05D004116 1.9e-19 100.5 288 27.8
Ah.05g177100 Amaranthus hybridus HOM05D003719 ORTHO05D004116 3.2e-19 99.8 242 31.0
Sc02g0003460 Simmondsia chinensis HOM05D003719 ORTHO05D004116 5.5e-19 99.0 278 30.9
Hma1.2p1_0462F.1_g158020 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 9.4e-19 98.2 278 32.7
THA.LOC104802889 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 9.4e-19 98.2 279 34.4
AUR62014507 Chenopodium quinoa HOM05D003719 ORTHO05D004116 2.7e-18 96.7 275 29.1
SGA_v2.0_scaffold95G28748 Striga asiatica HOM05D003719 ORTHO05D004116 6.1e-18 95.5 288 31.2
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 8.0e-18 95.1 289 33.9
TPR.G9787 Trifolium pratense HOM05D003719 ORTHO05D004116 8.0e-18 95.1 304 29.6
vmacro13601 Vaccinium macrocarpon HOM05D003719 ORTHO05D004116 1.0e-17 94.7 339 29.5
CDE11G0837 Ceratophyllum demersum HOM05D003719 ORTHO05D004116 1.8e-17 94.0 274 31.8
THA.LOC104820814 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.8e-17 94.0 293 31.4
PSO170G0628 Papaver somniferum HOM05D003719 ORTHO05D004116 2.3e-17 93.6 299 34.1
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 3.0e-17 93.2 288 31.6
Lj9A617T60 Lonicera japonica HOM05D003719 ORTHO05D004116 3.0e-17 93.2 250 32.4
PSO017G6528 Papaver somniferum HOM05D003719 ORTHO05D004116 4.0e-17 92.8 290 32.8
Ca_23168_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 8.8e-17 91.7 289 32.2
EL10Ac1g00661 Beta vulgaris HOM05D003719 ORTHO05D004116 1.2e-16 91.3 275 28.4
Nn1g09363 Nelumbo nucifera HOM05D003719 ORTHO05D004116 1.2e-16 91.3 291 30.2
unitig_0.g1580 Utricularia gibba HOM05D003719 ORTHO05D004116 1.5e-16 90.9 232 31.0
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 2.0e-16 90.5 291 33.7
Ah.05g177090 Amaranthus hybridus HOM05D000308 ORTHO05D005285 2.6e-16 90.1 252 30.2
HanXRQChr11g0343451 Helianthus annuus HOM05D003719 ORTHO05D004116 3.4e-16 89.7 238 35.3
HanXRQChr04g0117621 Helianthus annuus HOM05D003719 ORTHO05D004116 4.4e-16 89.4 295 28.5
Hund17170 Selenicereus undatus HOM05D003719 ORTHO05D000105 4.4e-16 89.4 272 28.7
BcaC04g18768 Brassica carinata HOM05D003719 ORTHO05D004116 5.7e-16 89.0 275 32.7
C09p59480 Brassica napus HOM05D003719 ORTHO05D004116 5.7e-16 89.0 275 32.7
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 5.7e-16 89.0 253 31.2
BolC9t58786H Brassica oleracea HOM05D003719 ORTHO05D004116 5.7e-16 89.0 275 32.7
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 7.5e-16 88.6 288 30.9
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 7.5e-16 88.6 253 31.2
Rhsim07G0047900 Rhododendron simsii HOM05D003719 ORTHO05D004116 9.8e-16 88.2 325 29.2
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 1.3e-15 87.8 253 31.2
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 3.7e-15 86.3 271 30.3
A10p21730 Brassica napus HOM05D003719 ORTHO05D004116 4.8e-15 85.9 287 30.0
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 4.8e-15 85.9 277 32.9
BraA10t44234Z Brassica rapa HOM05D003719 ORTHO05D004116 4.8e-15 85.9 287 30.0
FAN01G0294 Fragaria x ananassa HOM05D003719 ORTHO05D004116 4.8e-15 85.9 168 35.1
Oeu045633.2 Olea europaea HOM05D003719 ORTHO05D004116 6.3e-15 85.5 279 31.2
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 1.8e-14 84.0 259 30.5
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 1.8e-14 84.0 300 32.7
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 2.4e-14 83.6 259 30.5
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 2.4e-14 83.6 289 29.4
arahy.Tifrunner.gnm1.ann1.E07VAV Arachis hypogaea HOM05D003719 ORTHO05D004116 3.1e-14 83.2 171 36.3
Oeu034882.1 Olea europaea HOM05D003719 ORTHO05D004116 3.1e-14 83.2 217 32.3
Sed0017190 Sechium edule HOM05D003719 ORTHO05D004116 3.1e-14 83.2 253 31.6
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 1.6e-13 80.9 296 26.7
COL.COLO4_32214 Corchorus olitorius HOM05D003719 ORTHO05D004116 2.0e-13 80.5 264 30.3
Lalb_Chr12g0210141 Lupinus albus HOM05D003719 ORTHO05D004116 5.9e-13 79.0 288 27.4
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 7.7e-13 78.6 297 31.0
Lsat_1_v5_gn_1_89600 Lactuca sativa HOM05D003719 ORTHO05D004116 1.3e-12 77.8 265 29.8
Aqoxy7G02508 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 5.0e-12 75.9 283 30.7
Migut.O00700 Erythranthe guttata HOM05D003719 ORTHO05D004116 8.6e-12 75.1 137 38.0
Oeu032776.1 Olea europaea HOM05D003719 ORTHO05D004116 8.6e-12 75.1 267 28.8
Os10g0324900 Oryza sativa ssp. japonica HOM05D003719 ORTHO05D004116 1.1e-11 74.7 260 29.2
Hund26916 Selenicereus undatus HOM05D003719 ORTHO05D004116 7.2e-11 72.0 272 26.8
Lsat_1_v5_gn_7_34101 Lactuca sativa HOM05D003719 ORTHO05D004116 1.6e-10 70.9 291 27.1
Oeu024948.1 Olea europaea HOM05D003719 ORTHO05D004116 1.6e-10 70.9 277 29.6
Glyma.03G111600 Glycine max HOM05D003719 ORTHO05D004116 2.8e-10 70.1 143 37.1
DCAR_029570 Daucus carota HOM05D003719 ORTHO05D004116 3.6e-10 69.7 256 27.3
SHI54853 Sapria himalayana HOM05D003719 ORTHO05D004116 1.4e-09 67.8 280 26.8
HPP92_020485 Vanilla planifolia HOM05D003719 ORTHO05D004116 1.4e-09 67.8 240 28.3
SGA_v2.0_scaffold4G02229 Striga asiatica HOM05D003719 ORTHO05D004116 2.0e-08 63.9 125 37.6
Solyc10g024470.3 Solanum lycopersicum HOM05D003719 ORTHO05D004116 5.7e-08 62.4 123 38.2
Sopen10g009690 Solanum pennellii HOM05D003719 ORTHO05D004116 5.7e-08 62.4 123 38.2
ECA248G2234 Erigeron canadensis HOM05D003719 ORTHO05D004116 7.5e-08 62.0 285 26.3
DCAR_015727 Daucus carota HOM05D003719 ORTHO05D004116 1.3e-07 61.2 210 30.5
Psat4g207560 Pisum sativum HOM05D003719 ORTHO05D004116 2.8e-07 60.1 39 61.5
PGSC0003DMG400031514 Solanum tuberosum HOM05D003719 ORTHO05D004116 3.7e-07 59.7 67 47.8
DCAR_025000 Daucus carota HOM05D003719 ORTHO05D004116 8.3e-07 58.5 207 30.4
PSO732G0471 Papaver somniferum HOM05D003719 ORTHO05D004116 8.3e-07 58.5 240 28.8
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 1.1e-06 58.2 264 25.8
Migut.O00699 Erythranthe guttata HOM05D003719 ORTHO05D004116 1.4e-06 57.8 81 42.0
Lalb_Chr10g0091841 Lupinus albus HOM05D003719 ORTHO05D004116 1.4e-06 57.8 34 70.6
PSO732G0498 Papaver somniferum HOM05D003719 ORTHO05D004116 1.4e-06 57.8 240 28.3
PSO732G0548 Papaver somniferum HOM05D003719 ORTHO05D004116 1.4e-06 57.8 240 28.3
ATR0568G049 Amborella trichopoda HOM05D003719 ORTHO05D004116 4.1e-06 56.2 263 27.0
C03p09860 Brassica napus HOM05D003719 ORTHO05D004116 5.4e-06 55.8 240 27.1
Nn7g37398 Nelumbo nucifera HOM05D003719 ORTHO05D004116 9.2e-06 55.1 28 78.6


User provided reference genes

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