Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 8.3e-168 593.6 290 100.0
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 2.4e-159 565.5 274 100.0
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 1.4e-138 496.5 288 85.8
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 8.4e-136 487.3 274 86.1
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 1.9e-135 486.1 274 85.8
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 3.0e-125 452.2 278 81.3
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 1.5e-124 449.9 274 81.8
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 2.8e-123 445.7 274 79.6
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 2.7e-118 429.1 283 76.0
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 1.2e-113 413.7 286 72.7
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 2.6e-113 412.5 279 71.3
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 5.8e-113 411.4 276 76.4
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 2.2e-112 409.5 274 73.0
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 6.5e-112 407.9 280 72.1
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 1.1e-111 407.1 282 72.0
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 1.9e-111 406.4 274 71.5
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 3.2e-111 405.6 282 73.0
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 3.2e-111 405.6 279 72.0
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 4.2e-111 405.2 282 73.0
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 1.2e-110 403.7 278 72.3
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 1.6e-110 403.3 281 69.8
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 2.1e-110 402.9 274 71.2
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 7.9e-110 401.0 280 72.5
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 1.3e-109 400.2 236 78.0
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 1.3e-109 400.2 279 72.0
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 2.3e-109 399.4 278 72.3
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 5.1e-109 398.3 267 73.4
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 1.1e-108 397.1 231 81.4
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 2.5e-108 396.0 273 72.2
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 4.3e-108 395.2 277 71.1
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 5.7e-108 394.8 280 70.4
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 7.4e-108 394.4 276 71.4
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 9.6e-108 394.0 284 69.4
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 1.3e-107 393.7 279 72.4
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 1.6e-107 393.3 282 70.9
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 1.6e-107 393.3 280 69.3
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 2.1e-107 392.9 275 69.1
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 2.1e-107 392.9 283 70.7
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 3.7e-107 392.1 281 69.4
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 4.8e-107 391.7 280 70.0
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 4.8e-107 391.7 283 70.7
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 8.2e-107 391.0 280 68.2
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 1.1e-106 390.6 280 69.6
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.1e-106 390.6 271 73.1
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 2.4e-106 389.4 279 70.3
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 3.1e-106 389.0 280 69.6
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 5.3e-106 388.3 284 69.0
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 5.3e-106 388.3 284 69.0
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 5.3e-106 388.3 283 68.6
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 5.3e-106 388.3 279 69.2
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 6.9e-106 387.9 284 68.7
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 6.9e-106 387.9 284 68.7
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 6.9e-106 387.9 271 72.0
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 6.9e-106 387.9 276 70.3
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 9.0e-106 387.5 271 72.7
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 9.0e-106 387.5 271 72.7
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 2.0e-105 386.3 284 68.0
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 2.0e-105 386.3 279 69.2
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.0e-105 386.3 271 72.0
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 2.0e-105 386.3 277 69.7
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 3.4e-105 385.6 281 67.3
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 3.4e-105 385.6 271 69.7
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 4.5e-105 385.2 284 68.7
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 7.6e-105 384.4 274 70.1
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 7.6e-105 384.4 286 68.9
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 2.9e-104 382.5 286 68.9
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 1.1e-103 380.6 277 67.9
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 3.2e-103 379.0 279 69.2
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 3.2e-103 379.0 273 68.9
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 4.2e-103 378.6 257 72.8
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 2.1e-102 376.3 283 65.7
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 2.1e-102 376.3 272 70.6
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 6.7e-101 371.3 251 72.9
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 7.4e-100 367.9 232 74.6
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 1.6e-99 366.7 273 67.8
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 2.2e-99 366.3 219 79.0
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 2.8e-99 365.9 275 68.0
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 5.3e-98 361.7 262 66.0
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 1.5e-97 360.1 273 66.7
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 2.0e-97 359.8 262 68.7
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 4.5e-97 358.6 273 66.3
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 5.9e-97 358.2 263 65.8
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 3.8e-96 355.5 270 65.9
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 7.2e-95 351.3 284 62.7
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 1.6e-94 350.1 281 62.6
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 2.3e-93 346.3 280 62.9
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 3.1e-90 335.9 223 72.2
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 4.1e-90 335.5 278 60.8
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 6.5e-88 328.2 265 63.4
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 8.5e-88 327.8 281 63.0
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 1.9e-87 326.6 252 65.5
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.1e-86 323.2 269 64.3
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.1e-86 323.2 269 64.3
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 7.9e-86 321.2 256 60.9
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.1e-82 310.8 294 55.1
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 2.5e-79 299.7 236 66.9
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 1.0e-72 277.7 263 57.0
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 1.3e-72 277.3 266 55.3
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 1.7e-67 260.4 156 79.5
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 7.0e-66 255.0 156 78.2
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 5.9e-65 251.9 155 78.1
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 5.5e-63 245.4 155 74.8
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 8.0e-54 214.9 211 52.6
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 3.5e-49 199.5 229 47.2
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 3.7e-43 179.5 244 44.3
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 4.0e-37 159.5 146 58.9
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 2.0e-36 157.1 124 62.1
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 5.8e-36 155.6 126 61.9
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 8.6e-32 141.7 205 41.0
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 4.6e-25 119.4 60 86.7
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 1.0e-24 118.2 237 34.6


User provided reference genes

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