Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14757_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 0.0e+00 1244.6 628 100.0
Psat0s3513g0080 Pisum sativum HOM05D002653 ORTHO05D002623 5.1e-231 804.7 627 67.6
Medtr2g007250 Medicago truncatula HOM05D002653 ORTHO05D002623 6.9e-228 794.3 901 50.6
TPR.G8155 Trifolium pratense HOM05D002653 ORTHO05D002623 3.2e-225 785.4 902 51.1
Glyma.13G174600 Glycine max HOM05D002653 ORTHO05D002623 6.6e-194 681.4 630 57.3
Lj4g0020533 Lotus japonicus HOM05D002653 ORTHO05D002623 3.6e-184 649.0 628 55.6
LjContig00141g0016117 Lotus japonicus HOM05D002653 ORTHO05D002623 2.2e-181 639.8 630 54.8
Lalb_Chr01g0009381 Lupinus albus HOM05D002653 ORTHO05D002623 1.4e-180 637.1 657 53.4
arahy.Tifrunner.gnm1.ann1.GW217K Arachis hypogaea HOM05D002653 ORTHO05D002623 1.1e-164 584.3 623 51.7
VMungo0251G0195 Vigna mungo HOM05D002653 ORTHO05D002623 6.0e-163 578.6 689 48.0
Phvul.002G328600 Phaseolus vulgaris HOM05D002653 ORTHO05D002623 2.6e-126 456.8 542 48.7
QL04p064964 Quercus lobata HOM05D002653 ORTHO05D002623 1.7e-109 401.0 619 40.5
CiPaw.06G000600 Carya illinoinensis HOM05D002653 ORTHO05D002623 3.5e-102 376.7 621 39.0
MD17G1156800 Malus domestica HOM05D002653 ORTHO05D002623 4.2e-100 369.8 652 35.6
Prupe.3G028500 Prunus persica HOM05D002653 ORTHO05D002623 1.1e-97 361.7 591 37.4
Cfa016258 Carpinus fangiana HOM05D002653 ORTHO05D002623 1.7e-96 357.8 693 35.2
Haze_24505 Corylus avellana HOM05D002653 ORTHO05D002623 1.7e-96 357.8 693 35.1
RcHm_v2.0_Chr2g0148311 Rosa chinensis HOM05D002653 ORTHO05D002623 2.2e-93 347.4 591 37.6
Dinv38369 Davidia involucrata HOM05D002653 ORTHO05D002623 9.4e-92 342.0 613 35.7
FAN02G0462 Fragaria x ananassa HOM05D002653 ORTHO05D002623 8.0e-91 339.0 658 33.1
Sabra16G0308200 Salix brachista HOM05D002653 ORTHO05D002623 8.0e-91 339.0 694 32.4
FAN09G4442 Fragaria x ananassa HOM05D002653 ORTHO05D002623 7.5e-89 332.4 589 35.0
Potri.001G455600 Populus trichocarpa HOM05D002653 ORTHO05D002623 1.1e-87 328.6 694 32.1
FvH4_6g36300 Fragaria vesca HOM05D002653 ORTHO05D002623 7.0e-87 325.9 589 34.6
FAN14G5588 Fragaria x ananassa HOM05D002653 ORTHO05D002623 1.2e-86 325.1 589 34.6
CANSAT01G2419 Cannabis sativa HOM05D002653 ORTHO05D002623 2.7e-86 323.9 628 32.0
Manes.09G076300 Manihot esculenta HOM05D002653 ORTHO05D002623 2.7e-86 323.9 692 31.4
Manes.11G165700 Manihot esculenta HOM05D002653 ORTHO05D002623 1.3e-85 321.6 628 33.3
FAN14G0870 Fragaria x ananassa HOM05D002653 ORTHO05D002623 1.7e-85 321.2 589 34.6
CSS0041142 Camellia sinensis var. sinensis HOM05D002653 ORTHO05D002623 5.0e-85 319.7 629 32.6
Cpa.g.sc119.1 Carica papaya HOM05D002653 ORTHO05D002623 8.0e-83 312.4 607 34.4
Sed0003631 Sechium edule HOM05D002653 ORTHO05D002623 5.2e-82 309.7 622 32.2
Thecc.01G150000 Theobroma cacao HOM05D002653 ORTHO05D002623 1.2e-81 308.5 627 34.6
Duzib114G0204 Durio zibethinus HOM05D002653 ORTHO05D002623 2.0e-81 307.8 625 34.9
Ciclev10010886m.g Citrus clementina HOM05D002653 ORTHO05D002623 4.8e-80 303.1 628 34.6
CsaV3_1G044330 Cucumis sativus L. HOM05D002653 ORTHO05D002623 1.1e-79 302.0 612 32.8
TWI34G1636 Tripterygium wilfordii HOM05D002653 ORTHO05D002623 2.4e-79 300.8 630 32.5
ClCG03G010410 Citrullus lanatus HOM05D002653 ORTHO05D002623 7.0e-79 299.3 677 30.9
MELO3C010033.2 Cucumis melo HOM05D002653 ORTHO05D002623 5.9e-78 296.2 612 33.3
vmacro03486 Vaccinium macrocarpon HOM05D002653 ORTHO05D002623 1.1e-76 292.0 633 31.3
Gohir.A05G394600 Gossypium hirsutum HOM05D002653 ORTHO05D002623 1.5e-76 291.6 617 32.3
Gorai.012G024100 Gossypium raimondii HOM05D002653 ORTHO05D002623 1.2e-75 288.5 678 30.5
Eucgr.K01355 Eucalyptus grandis HOM05D002653 ORTHO05D002623 2.3e-74 284.3 702 30.6
Lj4C825G3 Lonicera japonica HOM05D002653 ORTHO05D002623 4.0e-74 283.5 614 32.7
Rhsim13G0127300 Rhododendron simsii HOM05D002653 ORTHO05D002623 6.8e-74 282.7 627 32.4
Atru.chr8.1040 Acer truncatum HOM05D002653 ORTHO05D002623 9.8e-73 278.9 300 48.7
EL10Ac1g01415 Beta vulgaris HOM05D002653 ORTHO05D002623 2.8e-72 277.3 619 30.2
AUR62013467 Chenopodium quinoa HOM05D002653 ORTHO05D002623 2.0e-70 271.2 614 28.8
ECA233G1976 Erigeron canadensis HOM05D002653 ORTHO05D002623 8.6e-69 265.8 635 31.7
Lsat_1_v5_gn_6_56501 Lactuca sativa HOM05D002653 ORTHO05D002623 8.6e-69 265.8 631 29.5
Sc15g0007450 Simmondsia chinensis HOM05D002653 ORTHO05D002623 1.2e-67 261.9 621 30.9
Lsat_1_v5_gn_8_5081 Lactuca sativa HOM05D002653 ORTHO05D002623 1.6e-67 261.5 630 29.4
AUR62026805 Chenopodium quinoa HOM05D002653 ORTHO05D002623 2.3e-66 257.7 616 27.8
HanXRQChr07g0186761 Helianthus annuus HOM05D002653 ORTHO05D002623 5.2e-66 256.5 613 31.0
DCAR_018920 Daucus carota HOM05D002653 ORTHO05D002623 3.7e-64 250.4 651 28.7
Aqoxy2G01525 Aquilegia oxysepala HOM05D002653 ORTHO05D002623 1.1e-63 248.8 631 30.9
MBI12_g09298_MAGBIO Magnolia biondii HOM05D002653 ORTHO05D002623 2.4e-63 247.7 628 28.5
GSVIVG01019366001 Vitis vinifera HOM05D002653 ORTHO05D002623 1.2e-62 245.4 500 32.0
Aa31LG11G3960 Aethionema arabicum HOM05D002653 ORTHO05D002623 3.9e-61 240.4 600 29.7
THA.LOC104814962 Tarenaya hassleriana HOM05D002653 ORTHO05D002623 4.3e-60 236.9 623 29.7
AT5G24740 Arabidopsis thaliana HOM05D002653 ORTHO05D002623 2.8e-59 234.2 626 27.5
PSO063G3289 Papaver somniferum HOM05D002653 ORTHO05D002623 8.0e-59 232.6 629 29.4
AL6G36330 Arabidopsis lyrata HOM05D002653 ORTHO05D002623 2.0e-57 228.0 622 27.3
BcaNung01253 Brassica carinata HOM05D002653 ORTHO05D002623 5.8e-57 226.5 617 27.7
C07p42990 Brassica napus HOM05D002653 ORTHO05D002623 5.8e-57 226.5 617 27.7
BolC7t44828H Brassica oleracea HOM05D002653 ORTHO05D002623 1.7e-56 224.9 623 29.1
A06p35550 Brassica napus HOM05D002653 ORTHO05D002623 4.9e-56 223.4 617 28.0
BraA06t26480Z Brassica rapa HOM05D002653 ORTHO05D002623 4.9e-56 223.4 617 28.0
Solyc11g045160.3 Solanum lycopersicum HOM05D002653 ORTHO05D002623 4.9e-56 223.4 650 27.7
Sopen11g020620 Solanum pennellii HOM05D002653 ORTHO05D002623 1.9e-55 221.5 649 27.4
PGR044G0026 Punica granatum HOM05D002653 ORTHO05D002623 7.1e-55 219.5 691 26.6
Nn7g37406 Nelumbo nucifera HOM05D002653 ORTHO05D002623 1.6e-54 218.4 618 27.0
Nn7g38446 Nelumbo nucifera HOM05D002653 ORTHO05D002623 1.6e-54 218.4 618 27.0
PSO782G1285 Papaver somniferum HOM05D002653 ORTHO05D002623 6.0e-54 216.5 300 40.3
Oeu013191.1 Olea europaea HOM05D002653 ORTHO05D002623 3.0e-53 214.2 608 29.3
Carub.0006s2259 Capsella rubella HOM05D002653 ORTHO05D002623 3.9e-53 213.8 621 28.7
Nitab4.5_0006025g0010 Nicotiana tabacum HOM05D002653 ORTHO05D002623 5.1e-53 213.4 628 27.2
Thhalv10003500m.g Eutrema salsugineum HOM05D002653 ORTHO05D002623 1.9e-52 211.5 627 28.7
Sp2g22690 Schrenkiella parvula HOM05D002653 ORTHO05D002623 9.5e-52 209.1 604 27.2
Cc11_g00280 Coffea canephora HOM05D002653 ORTHO05D002623 2.3e-50 204.5 543 30.0
Peaxi162Scf00126g00051 Petunia axillaris HOM05D002653 ORTHO05D002623 3.1e-50 204.1 632 27.7
Nitab4.5_0004202g0020 Nicotiana tabacum HOM05D002653 ORTHO05D002623 5.2e-50 203.4 629 27.2
CARHR188760 Cardamine hirsuta HOM05D002653 ORTHO05D002623 1.5e-49 201.8 621 27.7
MSTRG.8096 Avicennia marina HOM05D002653 ORTHO05D002623 1.7e-48 198.4 629 25.0
CAN.G690.1 Capsicum annuum HOM05D002653 ORTHO05D002623 3.7e-48 197.2 633 27.5
TAR624G1146 Trochodendron aralioides HOM05D002653 ORTHO05D002623 1.9e-47 194.9 520 30.4
SalBow1G3632 Salvia bowleyana HOM05D002653 ORTHO05D002623 3.2e-47 194.1 626 26.0
ATR1155G033 Amborella trichopoda HOM05D002653 ORTHO05D002623 4.1e-47 193.7 440 31.6
SalBow1G2769 Salvia bowleyana HOM05D002653 ORTHO05D002623 7.1e-47 193.0 626 25.9
Migut.L00839 Erythranthe guttata HOM05D002653 ORTHO05D002623 3.9e-45 187.2 607 26.0
SGA_v2.0_scaffold131G34416 Striga asiatica HOM05D002653 ORTHO05D002623 1.3e-40 172.2 618 25.1
Zm00001eb260890 Zea mays HOM05D002653 ORTHO05D002623 2.1e-35 154.8 611 23.2
SEGI_29400 Sequoiadendron giganteum HOM05D002653 ORTHO05D002623 5.3e-26 123.6 301 28.6
HPP92_001360 Vanilla planifolia HOM05D002653 ORTHO05D002623 4.5e-17 94.0 146 38.4
Phvul.002G234304 Phaseolus vulgaris HOM05D002653 ORTHO05D002623 4.8e-11 73.9 69 55.1
TAR624G0800 Trochodendron aralioides HOM05D002653 ORTHO05D002623 8.2e-11 73.2 61 50.8
unitig_8.g3108 Utricularia gibba HOM05D002653 ORTHO05D002623 5.8e-09 67.0 194 26.3
Actinidia10128 Actinidia chinensis HOM05D002653 ORTHO05D002623 7.2e-07 60.1 114 36.8


User provided reference genes

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