Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14721_v3 Cicer arietinum L. HOM05D003931 ORTHO05D004577 2.0e-180 635.6 311 100.0
TPR.G16574 Trifolium pratense HOM05D003931 ORTHO05D004577 9.2e-157 557.0 312 85.3
Medtr3g051220 Medicago truncatula HOM05D003931 ORTHO05D004577 1.6e-148 529.6 311 81.4
Psat5g180680 Pisum sativum HOM05D003931 ORTHO05D004577 4.6e-148 528.1 316 81.0
Phvul.006G040800 Phaseolus vulgaris HOM05D003931 ORTHO05D004577 1.6e-140 503.1 313 76.7
Glyma.18G099500 Glycine max HOM05D003931 ORTHO05D004577 2.4e-133 479.2 313 75.7
Lalb_Chr02g0155621 Lupinus albus HOM05D003931 ORTHO05D004577 3.2e-133 478.8 302 75.5
VMungo0540G1582 Vigna mungo HOM05D003931 ORTHO05D004577 7.1e-133 477.6 307 73.6
Lj6g0018199 Lotus japonicus HOM05D003931 ORTHO05D004577 1.2e-132 476.9 316 73.1
Glyma.08G314700 Glycine max HOM05D003931 ORTHO05D004577 2.7e-132 475.7 314 73.2
Lalb_Chr06g0171911 Lupinus albus HOM05D003931 ORTHO05D004577 3.9e-131 471.9 303 74.3
arahy.Tifrunner.gnm1.ann1.07EMGU Arachis hypogaea HOM05D003931 ORTHO05D004577 5.8e-127 458.0 311 71.7
QL08p011429 Quercus lobata HOM05D003931 ORTHO05D004577 1.9e-122 443.0 309 68.9
QL08p011634 Quercus lobata HOM05D003931 ORTHO05D004577 1.9e-122 443.0 309 68.9
QL08p011649 Quercus lobata HOM05D003931 ORTHO05D004577 1.9e-122 443.0 309 68.9
Prupe.4G210600 Prunus persica HOM05D003931 ORTHO05D004577 9.6e-122 440.7 313 70.3
MD03G1205300 Malus domestica HOM05D003931 ORTHO05D004577 2.8e-121 439.1 325 67.4
FAN16G2486 Fragaria x ananassa HOM05D003931 ORTHO05D004577 6.2e-121 438.0 306 69.0
FvH4_3g22400 Fragaria vesca HOM05D003931 ORTHO05D004577 3.1e-120 435.6 307 68.4
MD11G1221200 Malus domestica HOM05D003931 ORTHO05D004577 4.0e-120 435.3 319 66.1
CiPaw.11G187800 Carya illinoinensis HOM05D003931 ORTHO05D004577 6.9e-120 434.5 311 68.5
FAN21G1679 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.0e-119 433.0 307 69.1
FAN21G3611 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.0e-119 433.0 307 69.1
FAN11G2983 Fragaria x ananassa HOM05D003931 ORTHO05D004577 4.5e-119 431.8 307 68.1
Potri.001G424700 Populus trichocarpa HOM05D003931 ORTHO05D004577 5.8e-119 431.4 286 71.0
RcHm_v2.0_Chr5g0039071 Rosa chinensis HOM05D003931 ORTHO05D004577 5.8e-119 431.4 307 68.4
Manes.15G073200 Manihot esculenta HOM05D003931 ORTHO05D004577 4.9e-118 428.3 312 67.9
Cfa020372 Carpinus fangiana HOM05D003931 ORTHO05D004577 1.2e-116 423.7 302 68.2
Sabra16G0288300 Salix brachista HOM05D003931 ORTHO05D004577 1.6e-116 423.3 299 66.9
Haze_09657 Corylus avellana HOM05D003931 ORTHO05D004577 2.1e-116 422.9 311 65.6
TWI38G0918 Tripterygium wilfordii HOM05D003931 ORTHO05D004577 3.5e-116 422.2 308 68.5
ClCG10G005490 Citrullus lanatus HOM05D003931 ORTHO05D004577 7.9e-116 421.0 321 65.4
Hma1.2p1_1271F.1_g271720 Hydrangea macrophylla HOM05D003931 ORTHO05D004577 1.8e-115 419.9 277 70.4
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 1.1e-114 417.2 242 76.4
Gorai.002G087700 Gossypium raimondii HOM05D003931 ORTHO05D004577 1.1e-114 417.2 312 64.7
Gohir.D01G065800 Gossypium hirsutum HOM05D003931 ORTHO05D004577 1.9e-114 416.4 312 64.4
Gohir.A01G078700 Gossypium hirsutum HOM05D003931 ORTHO05D004577 2.5e-114 416.0 312 64.7
Sabra11G0123500 Salix brachista HOM05D003931 ORTHO05D004577 3.3e-114 415.6 308 64.6
Atru.chr2.3378 Acer truncatum HOM05D003931 ORTHO05D004577 5.7e-114 414.8 316 64.6
MELO3C025390.2 Cucumis melo HOM05D003931 ORTHO05D004577 7.4e-114 414.5 316 64.6
CsaV3_3G005230 Cucumis sativus L. HOM05D003931 ORTHO05D004577 1.3e-113 413.7 314 65.3
Lsat_1_v5_gn_5_6120 Lactuca sativa HOM05D003931 ORTHO05D004577 1.1e-112 410.6 306 64.7
Sc03g0008690 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.8e-112 409.8 311 62.1
Carub.0007s1381 Capsella rubella HOM05D003931 ORTHO05D004577 4.1e-112 408.7 293 65.9
Lj1C870G17 Lonicera japonica HOM05D003931 ORTHO05D004577 5.3e-112 408.3 259 71.4
Thhalv10027264m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 6.9e-112 407.9 284 68.0
BolC1t02250H Brassica oleracea HOM05D003931 ORTHO05D004577 9.0e-112 407.5 305 65.2
BcaB03g12524 Brassica carinata HOM05D003931 ORTHO05D004577 2.0e-111 406.4 286 67.8
A01p18190 Brassica napus HOM05D003931 ORTHO05D004577 3.4e-111 405.6 291 67.0
Ciclev10009005m.g Citrus clementina HOM05D003931 ORTHO05D004577 3.4e-111 405.6 301 65.8
A08p20580 Brassica napus HOM05D003931 ORTHO05D004577 5.9e-111 404.8 287 67.9
C01p23150 Brassica napus HOM05D003931 ORTHO05D004577 5.9e-111 404.8 283 67.8
BraA01t01774Z Brassica rapa HOM05D003931 ORTHO05D004577 5.9e-111 404.8 291 66.7
Oeu042929.1 Olea europaea HOM05D003931 ORTHO05D004577 5.9e-111 404.8 279 68.1
BraA08t34014Z Brassica rapa HOM05D003931 ORTHO05D004577 7.7e-111 404.4 287 67.9
CANSAT64G1454 Cannabis sativa HOM05D003931 ORTHO05D004577 1.0e-110 404.1 301 64.5
HanXRQChr05g0159031 Helianthus annuus HOM05D003931 ORTHO05D004577 5.0e-110 401.7 288 66.0
Lsat_1_v5_gn_5_6180 Lactuca sativa HOM05D003931 ORTHO05D004577 5.0e-110 401.7 276 68.1
Actinidia09908 Actinidia chinensis HOM05D003931 ORTHO05D004577 6.5e-110 401.4 293 66.6
Nn1g03571 Nelumbo nucifera HOM05D003931 ORTHO05D004577 6.5e-110 401.4 233 76.4
Sp7g25010 Schrenkiella parvula HOM05D003931 ORTHO05D004577 6.5e-110 401.4 279 68.5
Eucgr.F00963 Eucalyptus grandis HOM05D003931 ORTHO05D004577 8.5e-110 401.0 302 62.9
Migut.M01779 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.4e-109 400.2 280 66.4
Aa31LG5G10360 Aethionema arabicum HOM05D003931 ORTHO05D004577 2.5e-109 399.4 281 68.0
BcaC07g38267 Brassica carinata HOM05D003931 ORTHO05D004577 7.2e-109 397.9 291 67.0
C08p10140 Brassica napus HOM05D003931 ORTHO05D004577 7.2e-109 397.9 291 67.0
BolC8t48692H Brassica oleracea HOM05D003931 ORTHO05D004577 7.2e-109 397.9 291 67.0
vmacro11735 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 2.1e-108 396.4 310 63.2
Ah.04g165790 Amaranthus hybridus HOM05D003931 ORTHO05D004577 1.0e-107 394.0 281 65.8
THA.LOC104809192 Tarenaya hassleriana HOM05D003931 ORTHO05D004577 1.4e-107 393.7 277 68.6
Nitab4.5_0001604g0100 Nicotiana tabacum HOM05D003931 ORTHO05D004577 1.8e-107 393.3 289 64.0
Sed0028072 Sechium edule HOM05D003931 ORTHO05D004577 1.8e-107 393.3 313 60.7
TAR626G0527 Trochodendron aralioides HOM05D003931 ORTHO05D004577 1.8e-107 393.3 254 69.7
Aqoxy1G03269 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 2.3e-107 392.9 267 65.9
CARHR234700 Cardamine hirsuta HOM05D003931 ORTHO05D004577 8.8e-107 391.0 305 61.3
CAN.G337.115 Capsicum annuum HOM05D003931 ORTHO05D004577 1.1e-106 390.6 278 64.7
MSTRG.6909 Avicennia marina HOM05D003931 ORTHO05D004577 1.5e-106 390.2 236 72.9
EL10Ac4g07844 Beta vulgaris HOM05D003931 ORTHO05D004577 1.5e-106 390.2 302 60.9
AUR62020469 Chenopodium quinoa HOM05D003931 ORTHO05D004577 4.3e-106 388.7 306 60.8
Thecc.07G042800 Theobroma cacao HOM05D003931 ORTHO05D004577 4.3e-106 388.7 239 71.1
AL7G25800 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 1.7e-105 386.7 294 62.9
AUR62015742 Chenopodium quinoa HOM05D003931 ORTHO05D004577 1.7e-105 386.7 293 62.5
SGA_v2.0_scaffold172G38997 Striga asiatica HOM05D003931 ORTHO05D004577 3.7e-105 385.6 247 70.0
PGR083G2742 Punica granatum HOM05D003931 ORTHO05D004577 1.1e-104 384.0 321 58.9
AT4G27030 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 4.1e-104 382.1 309 60.5
Cc05_g13590 Coffea canephora HOM05D003931 ORTHO05D004577 5.3e-104 381.7 228 73.2
Sc03g0008680 Simmondsia chinensis HOM05D003931 ORTHO05D004577 2.0e-103 379.8 284 62.3
PGSC0003DMG400022225 Solanum tuberosum HOM05D003931 ORTHO05D004577 2.0e-103 379.8 285 62.8
unitig_62.g23279 Utricularia gibba HOM05D003931 ORTHO05D004577 3.4e-103 379.0 233 73.4
Sopen07g032620 Solanum pennellii HOM05D003931 ORTHO05D004577 1.3e-102 377.1 291 60.5
Solyc07g064410.1 Solanum lycopersicum HOM05D003931 ORTHO05D004577 1.2e-100 370.5 307 58.0
PSO675G5012 Papaver somniferum HOM05D003931 ORTHO05D004577 1.6e-100 370.2 277 63.2
DCAR_008677 Daucus carota HOM05D003931 ORTHO05D004577 7.9e-100 367.9 314 59.2
PSO541G1838 Papaver somniferum HOM05D003931 ORTHO05D004577 1.0e-99 367.5 278 62.6
Duzib213G0550 Durio zibethinus HOM05D003931 ORTHO05D004577 2.3e-99 366.3 265 63.0
Sp7g24990 Schrenkiella parvula HOM05D003931 ORTHO05D004577 6.7e-99 364.8 278 60.8
Lj6g0018599 Lotus japonicus HOM05D003931 ORTHO05D004577 2.0e-98 363.2 304 57.9
Aa31LG5G10380 Aethionema arabicum HOM05D003931 ORTHO05D004577 1.3e-97 360.5 254 63.8
Thhalv10026787m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 1.3e-97 360.5 290 59.0
Peaxi162Scf00450g00075 Petunia axillaris HOM05D003931 ORTHO05D004577 2.8e-97 359.4 223 70.9
Thhalv10025879m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 1.1e-96 357.5 280 60.0
CARHR049940 Cardamine hirsuta HOM05D003931 ORTHO05D004577 7.0e-96 354.8 280 59.3
C07p55050 Brassica napus HOM05D003931 ORTHO05D004577 1.5e-95 353.6 280 59.3
Nitab4.5_0004336g0020 Nicotiana tabacum HOM05D003931 ORTHO05D004577 3.5e-95 352.4 253 66.0
Cfa009708 Carpinus fangiana HOM05D003931 ORTHO05D004577 4.5e-95 352.1 228 70.6
BcaC06g32716 Brassica carinata HOM05D003931 ORTHO05D004577 2.2e-94 349.7 279 58.8
Rhsim06G0216100 Rhododendron simsii HOM05D003931 ORTHO05D004577 3.8e-94 349.0 194 79.9
BolC7t46007H Brassica oleracea HOM05D003931 ORTHO05D004577 3.2e-93 345.9 280 57.9
QL08p011463 Quercus lobata HOM05D003931 ORTHO05D004577 3.2e-93 345.9 236 67.8
Carub.0004s0202 Capsella rubella HOM05D003931 ORTHO05D004577 4.2e-93 345.5 244 65.6
Sp7g25000 Schrenkiella parvula HOM05D003931 ORTHO05D004577 7.2e-93 344.7 283 59.0
AL4G12480 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 9.4e-93 344.4 258 61.6
BraA03t14771Z Brassica rapa HOM05D003931 ORTHO05D004577 1.6e-92 343.6 279 57.3
AT1G62190 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 3.6e-92 342.4 277 57.0
AT2G22890 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 4.7e-92 342.0 260 62.3
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 4.7e-92 342.0 227 65.2
Haze_23062 Corylus avellana HOM05D003931 ORTHO05D004577 4.7e-92 342.0 241 66.0
ATR0752G116 Amborella trichopoda HOM05D003931 ORTHO05D004577 1.0e-91 340.9 239 63.6
Carub.0002s0286 Capsella rubella HOM05D003931 ORTHO05D004577 1.0e-91 340.9 272 56.6
A03p57020 Brassica napus HOM05D003931 ORTHO05D004577 1.4e-91 340.5 279 56.6
Lsat_1_v5_gn_5_5140 Lactuca sativa HOM05D003931 ORTHO05D004577 1.8e-91 340.1 305 54.4
Sc03g0008670 Simmondsia chinensis HOM05D003931 ORTHO05D004577 3.3e-90 335.9 309 52.4
Prupe.4G210500 Prunus persica HOM05D003931 ORTHO05D004577 5.7e-90 335.1 209 73.2
Atru.chr2.3340 Acer truncatum HOM05D003931 ORTHO05D004577 1.7e-89 333.6 220 67.3
BcaB03g12523 Brassica carinata HOM05D003931 ORTHO05D004577 3.1e-88 329.3 272 59.9
vmacro11734 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 1.2e-87 327.4 230 62.2
Atru.chr2.3337 Acer truncatum HOM05D003931 ORTHO05D004577 1.0e-86 324.3 243 61.3
AUR62015741 Chenopodium quinoa HOM05D003931 ORTHO05D004577 1.5e-85 320.5 249 56.2
PGSC0003DMG400004435 Solanum tuberosum HOM05D003931 ORTHO05D004577 2.5e-85 319.7 238 61.3
CSS0050113 Camellia sinensis var. sinensis HOM05D003931 ORTHO05D004577 4.0e-83 312.4 194 73.2
BcaC07g38266 Brassica carinata HOM05D003931 ORTHO05D004577 5.2e-83 312.0 297 55.2
C08p10100 Brassica napus HOM05D003931 ORTHO05D004577 5.2e-83 312.0 297 55.2
BolC8t48689H Brassica oleracea HOM05D003931 ORTHO05D004577 5.2e-83 312.0 297 55.2
BcaC07g38264 Brassica carinata HOM05D003931 ORTHO05D004577 1.5e-82 310.5 297 55.2
A08p20590 Brassica napus HOM05D003931 ORTHO05D004577 1.5e-82 310.5 272 57.7
BraA08t34015Z Brassica rapa HOM05D003931 ORTHO05D004577 4.4e-82 308.9 272 57.7
COL.COLO4_09644 Corchorus olitorius HOM05D003931 ORTHO05D004577 1.8e-80 303.5 308 51.9
Oeu062594.1 Olea europaea HOM05D003931 ORTHO05D004577 1.2e-79 300.8 227 58.6
CANSAT11G0562 Cannabis sativa HOM05D003931 ORTHO05D004577 6.5e-78 295.0 220 61.4
Cpa.g.sc97.27 Carica papaya HOM05D003931 ORTHO05D004577 2.7e-76 289.7 238 61.8
SEGI_34207 Sequoiadendron giganteum HOM05D003931 ORTHO05D004577 2.6e-74 283.1 255 53.7
CANSAT11G1176 Cannabis sativa HOM05D003931 ORTHO05D004577 2.4e-72 276.6 219 56.2
BolC8t48691H Brassica oleracea HOM05D003931 ORTHO05D004577 5.9e-71 271.9 198 64.6
QL09p032903 Quercus lobata HOM05D003931 ORTHO05D004577 1.1e-69 267.7 159 76.1
Aqoxy1G03270 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 1.5e-69 267.3 217 58.5
Mapoly0034s0071 Marchantia polymorpha HOM05D003931 ORTHO05D004577 2.5e-69 266.5 228 51.8
Zm00001eb413170 Zea mays HOM05D003931 ORTHO05D004577 1.6e-68 263.8 275 49.1
FAN11G0561 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.8e-67 260.4 265 52.5
Os08g0187900 Oryza sativa ssp. japonica HOM05D003931 ORTHO05D004577 2.0e-66 256.9 237 51.5
Eucgr.L01106 Eucalyptus grandis HOM05D003931 ORTHO05D004577 2.6e-66 256.5 302 46.4
SGA_v2.0_scaffold9G05067 Striga asiatica HOM05D003931 ORTHO05D004577 1.1e-64 251.1 237 49.8
AagrBONN_evm.TU.Sc2ySwM_368.1941 Anthoceros agrestis HOM05D003931 ORTHO05D004577 7.0e-64 248.4 247 48.6
SMO364G0503 Selaginella moellendorffii HOM05D003931 ORTHO05D004577 7.8e-63 245.0 229 51.5
Migut.H01834 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.7e-62 243.8 233 50.2
Migut.H01835 Erythranthe guttata HOM05D003931 ORTHO05D004577 2.1e-60 236.9 235 47.2
Pp3c13_12570 Physcomitrium patens HOM05D003931 ORTHO05D004577 1.8e-59 233.8 268 42.2
unitig_749.g13966 Utricularia gibba HOM05D003931 ORTHO05D004577 2.3e-59 233.4 234 45.7
CDE05G0281 Ceratophyllum demersum HOM05D003931 ORTHO05D004577 2.2e-57 226.9 194 57.2
SGA_v2.0_scaffold9G05070 Striga asiatica HOM05D003931 ORTHO05D004577 8.3e-57 224.9 249 42.6
Cfa009711 Carpinus fangiana HOM05D003931 ORTHO05D004577 1.2e-55 221.1 177 62.1
Migut.H01836 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.2e-55 221.1 222 47.7
COL.COLO4_07219 Corchorus olitorius HOM05D003931 ORTHO05D004577 6.0e-55 218.8 130 73.8
MCO05G373 Micromonas commoda HOM05D003931 ORTHO05D004577 7.8e-55 218.4 216 49.5
Cre16.g673001 Chlamydomonas reinhardtii HOM05D003931 ORTHO05D004577 2.3e-54 216.9 234 44.9
FvH4_3g22391 Fragaria vesca HOM05D003931 ORTHO05D004577 3.0e-54 216.5 193 54.9
Zm00001eb413200 Zea mays HOM05D003931 ORTHO05D004577 4.4e-50 202.6 234 45.3
CBR_g30523 Chara braunii HOM05D003931 ORTHO05D004577 9.8e-50 201.4 315 35.9
ECA246G1165 Erigeron canadensis HOM05D003931 ORTHO05D004577 6.4e-49 198.7 153 60.1
Haze_23061 Corylus avellana HOM05D003931 ORTHO05D004577 2.4e-48 196.8 154 62.3
PRCOL_00003954 Prasinoderma coloniale HOM05D003931 ORTHO05D004577 2.7e-47 193.4 231 41.1
COL.COLO4_07218 Corchorus olitorius HOM05D003931 ORTHO05D004577 2.8e-44 183.3 109 73.4
AL3G48190 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 4.3e-37 159.5 97 70.1
C01p23190 Brassica napus HOM05D003931 ORTHO05D004577 7.3e-37 158.7 87 79.3
C08p10120 Brassica napus HOM05D003931 ORTHO05D004577 2.0e-26 124.0 92 62.0
BcaC06g32715 Brassica carinata HOM05D003931 ORTHO05D004577 5.5e-16 89.4 49 77.6
unitig_26.g9960 Utricularia gibba HOM05D003931 ORTHO05D004577 4.3e-13 79.7 86 40.7
BcaC09g50623 Brassica carinata HOM05D003931 ORTHO05D004577 1.3e-12 78.2 96 44.8
unitig_26.g9959 Utricularia gibba HOM05D001404 ORTHO05D026306 3.2e-08 63.5 43 65.1


User provided reference genes

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