Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13626_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008374 5.3e-139 497.7 248 100.0
Psat5g198440 Pisum sativum HOM05D001674 ORTHO05D008374 2.7e-82 309.3 224 73.7
TPR.G12256 Trifolium pratense HOM05D001674 ORTHO05D008374 4.0e-70 268.9 224 67.4
Lj1g0003467 Lotus japonicus HOM05D001674 ORTHO05D008374 3.3e-64 249.2 219 62.1
Glyma.06G199800 Glycine max HOM05D001674 ORTHO05D008374 6.4e-60 235.0 234 56.4
Phvul.009G190731 Phaseolus vulgaris HOM05D001674 ORTHO05D008374 2.2e-52 209.9 234 51.7
VMungo1309G0587 Vigna mungo HOM05D000002 ORTHO05D000001 1.6e-50 203.8 234 53.0
Lalb_Chr22g0355251 Lupinus albus HOM05D001674 ORTHO05D008374 2.3e-49 199.9 230 48.7
arahy.Tifrunner.gnm1.ann1.1X400K Arachis hypogaea HOM05D001674 ORTHO05D008374 3.4e-37 159.5 224 43.3
arahy.Tifrunner.gnm1.ann1.D3EHI2 Arachis hypogaea HOM05D001674 ORTHO05D008374 4.5e-37 159.1 224 43.3
Manes.06G087800 Manihot esculenta HOM05D001674 ORTHO05D008374 1.0e-25 121.3 217 41.5
Atru.chr9.282 Acer truncatum HOM05D001674 ORTHO05D008374 2.3e-25 120.2 236 37.3
Dinv38776 Davidia involucrata HOM05D001674 ORTHO05D008374 2.8e-23 113.2 241 37.3
MD14G1208200 Malus domestica HOM05D001674 ORTHO05D008374 4.8e-23 112.5 149 43.0
RcHm_v2.0_Chr7g0182391 Rosa chinensis HOM05D001674 ORTHO05D008374 1.8e-22 110.5 98 57.1
Thecc.03G096600 Theobroma cacao HOM05D001674 ORTHO05D008374 1.8e-22 110.5 102 55.9
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 2.4e-22 110.2 104 51.9
FvH4_5g14341 Fragaria vesca HOM05D001674 ORTHO05D008374 4.1e-22 109.4 104 51.9
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 4.1e-22 109.4 104 51.9
Cfa019293 Carpinus fangiana HOM05D001674 ORTHO05D008374 4.5e-21 105.9 255 34.1
PGR083G1883 Punica granatum HOM05D001674 ORTHO05D008374 4.5e-21 105.9 130 47.7
Cpa.g.sc94.1 Carica papaya HOM05D001674 ORTHO05D008374 1.3e-20 104.4 228 34.2
TAR371G0783 Trochodendron aralioides HOM05D001674 ORTHO05D008374 1.7e-20 104.0 237 34.6
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 2.2e-20 103.6 133 42.9
Lj9A469T59 Lonicera japonica HOM05D001674 ORTHO05D008374 2.2e-20 103.6 224 34.4
Prupe.5G200300 Prunus persica HOM05D001674 ORTHO05D008374 2.2e-20 103.6 130 43.1
TWI15G0866 Tripterygium wilfordii HOM05D001674 ORTHO05D008374 4.2e-19 99.4 97 49.5
Haze_07675 Corylus avellana HOM05D001674 ORTHO05D008374 9.4e-19 98.2 166 39.2
CANSAT80G0757 Cannabis sativa HOM05D001674 ORTHO05D008374 2.7e-18 96.7 222 33.8
Eucgr.B00565 Eucalyptus grandis HOM05D001674 ORTHO05D008374 3.6e-18 96.3 168 36.9
COL.COLO4_36884 Corchorus olitorius HOM05D001674 ORTHO05D008374 4.6e-18 95.9 232 33.6
Aqoxy3G00457 Aquilegia oxysepala HOM05D001674 ORTHO05D008374 6.1e-18 95.5 208 32.2
Sed0002195 Sechium edule HOM05D001674 ORTHO05D008374 2.3e-17 93.6 178 37.1
HanXRQChr14g0426861 Helianthus annuus HOM05D001674 ORTHO05D008374 3.0e-17 93.2 97 50.5
ClCG06G015870 Citrullus lanatus HOM05D001674 ORTHO05D008374 3.9e-17 92.8 200 36.0
Gohir.A03G069032 Gossypium hirsutum HOM05D001674 ORTHO05D008374 6.7e-17 92.0 130 42.3
Potri.012G067000 Populus trichocarpa HOM05D001674 ORTHO05D008374 6.7e-17 92.0 224 34.8
GSVIVG01007916001 Vitis vinifera HOM05D001674 ORTHO05D008374 6.7e-17 92.0 74 56.8
Sabra12G0048100 Salix brachista HOM05D001674 ORTHO05D008374 1.5e-16 90.9 162 38.3
MELO3C017204.2 Cucumis melo HOM05D001674 ORTHO05D008374 3.3e-16 89.7 238 33.2
DCAR_026018 Daucus carota HOM05D001674 ORTHO05D008374 4.3e-16 89.4 225 31.1
Migut.D01671 Erythranthe guttata HOM05D001674 ORTHO05D008374 5.7e-16 89.0 163 41.1
Rhsim08G0149800 Rhododendron simsii HOM05D000001 ORTHO05D008374 5.7e-16 89.0 73 60.3
SalBow7G3861 Salvia bowleyana HOM05D001674 ORTHO05D008374 7.4e-16 88.6 122 45.1
CsaV3_1G002690 Cucumis sativus L. HOM05D001674 ORTHO05D008374 1.3e-15 87.8 237 33.8
Gohir.D03G095500 Gossypium hirsutum HOM05D001674 ORTHO05D008374 1.3e-15 87.8 129 42.6
ATR0064G032 Amborella trichopoda HOM05D001674 ORTHO05D008374 1.7e-15 87.4 142 40.1
Ciclev10018579m.g Citrus clementina HOM05D001674 ORTHO05D008374 3.7e-15 86.3 185 34.6
Nitab4.5_0002881g0060 Nicotiana tabacum HOM05D001674 ORTHO05D008374 6.3e-15 85.5 91 48.4
Nitab4.5_0004511g0090 Nicotiana tabacum HOM05D001674 ORTHO05D008374 6.3e-15 85.5 91 49.5
Cc00_g02240 Coffea canephora HOM05D001674 ORTHO05D008374 1.1e-14 84.7 119 41.2
Hma1.2p1_0322F.1_g124930 Hydrangea macrophylla HOM05D001674 ORTHO05D008374 1.8e-14 84.0 221 31.2
unitig_0.g12 Utricularia gibba HOM05D001674 ORTHO05D008374 1.8e-14 84.0 83 49.4
Nn4g23350 Nelumbo nucifera HOM05D001674 ORTHO05D008374 4.1e-14 82.8 162 34.6
MSTRG.9601 Avicennia marina HOM05D001674 ORTHO05D008374 5.3e-14 82.4 153 37.3
CAN.G479.34 Capsicum annuum HOM05D001674 ORTHO05D008374 6.9e-14 82.0 92 45.7
Zm00001eb326710 Zea mays HOM05D001674 ORTHO05D008374 1.2e-13 81.3 96 46.9
A03p03470 Brassica napus HOM05D001674 ORTHO05D008374 2.0e-13 80.5 221 30.3
Os07g0598300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008374 2.0e-13 80.5 94 43.6
Carub.0006s0673 Capsella rubella HOM05D001674 ORTHO05D008374 4.5e-13 79.3 218 30.7
Sopen03g034520 Solanum pennellii HOM05D001674 ORTHO05D008374 4.5e-13 79.3 141 37.6
Peaxi162Scf00201g00024 Petunia axillaris HOM05D001674 ORTHO05D008374 5.9e-13 79.0 141 36.2
Gorai.003G100200 Gossypium raimondii HOM05D001674 ORTHO05D008374 7.7e-13 78.6 235 32.3
Oeu032214.1 Olea europaea HOM05D001674 ORTHO05D008374 1.3e-12 77.8 75 46.7
HPP92_013436 Vanilla planifolia HOM05D001674 ORTHO05D008374 2.9e-12 76.6 77 49.4
C03p03890 Brassica napus HOM05D001674 ORTHO05D008374 3.8e-12 76.3 221 29.4
BolC3t12927H Brassica oleracea HOM05D001674 ORTHO05D008374 3.8e-12 76.3 213 31.5
SHI26980 Sapria himalayana HOM05D001674 ORTHO05D008374 3.8e-12 76.3 82 46.3
Aa31LG3G18650 Aethionema arabicum HOM05D001674 ORTHO05D008374 5.0e-12 75.9 204 31.4
PSO017G4168 Papaver somniferum HOM05D001674 ORTHO05D008374 5.0e-12 75.9 128 35.9
THA.LOC104818327 Tarenaya hassleriana HOM05D001674 ORTHO05D008374 6.5e-12 75.5 81 48.1
AT5G07810 Arabidopsis thaliana HOM05D001674 ORTHO05D008374 8.5e-12 75.1 202 29.7
Cc00_g14900 Coffea canephora HOM05D001674 ORTHO05D008374 8.5e-12 75.1 81 48.1
AL6G18150 Arabidopsis lyrata HOM05D001674 ORTHO05D008374 1.1e-11 74.7 222 29.3
BraA03t09697Z Brassica rapa HOM05D001674 ORTHO05D008374 1.1e-11 74.7 213 31.5
Thhalv10012481m.g Eutrema salsugineum HOM05D001674 ORTHO05D008374 1.4e-11 74.3 236 31.8
Lsat_1_v5_gn_5_21720 Lactuca sativa HOM05D001674 ORTHO05D008374 4.2e-11 72.8 190 31.1
SGA_v2.0_scaffold65G22108 Striga asiatica HOM05D001674 ORTHO05D008374 1.2e-10 71.2 212 33.0
vmacro17585 Vaccinium macrocarpon HOM05D001674 ORTHO05D008374 2.7e-10 70.1 81 46.9
EL10Ac5g11090 Beta vulgaris HOM05D001674 ORTHO05D008374 4.7e-10 69.3 161 34.8
Sc12g0006560 Simmondsia chinensis HOM05D001674 ORTHO05D008374 4.7e-10 69.3 99 37.4
Sp6g35120 Schrenkiella parvula HOM05D001674 ORTHO05D008374 7.9e-10 68.6 231 29.0
AUR62021607 Chenopodium quinoa HOM05D001674 ORTHO05D008374 6.7e-09 65.5 120 33.3
Ah.11g048050 Amaranthus hybridus HOM05D001674 ORTHO05D008374 3.3e-08 63.2 157 32.5
AUR62008488 Chenopodium quinoa HOM05D001674 ORTHO05D008374 3.3e-08 63.2 157 28.7
Hund09848 Selenicereus undatus HOM05D001674 ORTHO05D008374 3.7e-07 59.7 163 31.9
CSS0007026 Camellia sinensis var. sinensis HOM05D001674 ORTHO05D008374 7.0e-06 55.5 281 24.6


User provided reference genes

Program Settings