Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13529_v3 Cicer arietinum L. HOM05D005817 ORTHO05D007140 5.3e-162 574.3 294 100.0
Psat4g000960 Pisum sativum HOM05D005817 ORTHO05D007140 5.3e-146 521.2 294 89.8
TPR.G6004 Trifolium pratense HOM05D005817 ORTHO05D007140 4.3e-140 501.5 297 87.5
Lj4g0018327 Lotus japonicus HOM05D005817 ORTHO05D007140 1.3e-139 500.0 299 85.6
Lalb_Chr07g0176811 Lupinus albus HOM05D005817 ORTHO05D007140 1.4e-138 496.5 298 84.9
Phvul.003G075900 Phaseolus vulgaris HOM05D005817 ORTHO05D007140 5.3e-138 494.6 300 86.0
arahy.Tifrunner.gnm1.ann1.86KQ48 Arachis hypogaea HOM05D005817 ORTHO05D007140 1.4e-135 486.5 318 79.2
Glyma.07G272500 Glycine max HOM05D005817 ORTHO05D007140 2.5e-135 485.7 297 84.8
arahy.Tifrunner.gnm1.ann1.NEQE4P Arachis hypogaea HOM05D005817 ORTHO05D007140 5.5e-135 484.6 318 78.9
Medtr4g134630 Medicago truncatula HOM05D005817 ORTHO05D007140 3.0e-133 478.8 289 85.1
Prupe.1G585700 Prunus persica HOM05D005817 ORTHO05D007140 1.5e-127 459.9 298 79.5
QL02p103359 Quercus lobata HOM05D005817 ORTHO05D007140 1.6e-126 456.4 296 79.7
CANSAT01G0715 Cannabis sativa HOM05D005817 ORTHO05D007140 1.8e-125 453.0 293 81.6
CsaV3_5G027420 Cucumis sativus L. HOM05D005817 ORTHO05D007140 3.0e-125 452.2 301 79.1
CiPaw.06G176700 Carya illinoinensis HOM05D005817 ORTHO05D007140 5.2e-125 451.4 298 78.2
MD08G1248300 Malus domestica HOM05D005817 ORTHO05D007140 6.7e-125 451.1 298 77.9
Gohir.A06G115800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 1.8e-122 443.0 293 77.5
Gohir.D06G122800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 1.8e-122 443.0 293 77.5
Gorai.010G142900 Gossypium raimondii HOM05D005817 ORTHO05D007140 5.3e-122 441.4 293 77.1
Thecc.06G019900 Theobroma cacao HOM05D005817 ORTHO05D007140 5.3e-122 441.4 293 77.8
MD15G1443200 Malus domestica HOM05D005817 ORTHO05D007140 1.6e-121 439.9 306 75.8
Sed0006174 Sechium edule HOM05D005817 ORTHO05D007140 5.0e-120 434.9 302 76.2
Duzib160G0844 Durio zibethinus HOM05D005817 ORTHO05D007140 8.5e-120 434.1 293 76.5
PGR142G3472 Punica granatum HOM05D005817 ORTHO05D007140 8.5e-120 434.1 298 74.8
RcHm_v2.0_Chr7g0219661 Rosa chinensis HOM05D005817 ORTHO05D007140 1.5e-119 433.3 298 74.8
Hma1.2p1_0052F.1_g030020 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 2.5e-119 432.6 305 75.4
Oeu028475.1 Olea europaea HOM05D005817 ORTHO05D007140 5.5e-119 431.4 298 74.8
Eucgr.I02797 Eucalyptus grandis HOM05D005817 ORTHO05D007140 9.4e-119 430.6 301 75.7
TWI14G0757 Tripterygium wilfordii HOM05D005817 ORTHO05D007140 1.2e-118 430.3 296 77.0
TAR628G1209 Trochodendron aralioides HOM05D005817 ORTHO05D007140 1.2e-118 430.3 301 75.7
Ciclev10002025m.g Citrus clementina HOM05D005817 ORTHO05D007140 1.6e-118 429.9 299 76.6
CSS0044256 Camellia sinensis var. sinensis HOM05D005817 ORTHO05D007140 2.1e-118 429.5 304 74.3
Oeu028476.1 Olea europaea HOM05D005817 ORTHO05D007140 2.1e-118 429.5 298 74.5
Solyc01g103020.4 Solanum lycopersicum HOM05D005817 ORTHO05D007140 2.1e-118 429.5 298 73.8
TAR376G0556 Trochodendron aralioides HOM05D005817 ORTHO05D007140 2.1e-118 429.5 306 74.5
Nitab4.5_0007689g0010 Nicotiana tabacum HOM05D005817 ORTHO05D007140 2.7e-118 429.1 296 74.3
PGSC0003DMG400020713 Solanum tuberosum HOM05D005817 ORTHO05D007140 4.7e-118 428.3 298 73.8
Sabra01G0174300 Salix brachista HOM05D005817 ORTHO05D007140 1.8e-117 426.4 324 72.2
CAN.G855.54 Capsicum annuum HOM05D005817 ORTHO05D007140 6.8e-117 424.5 296 74.3
Cc02_g23610 Coffea canephora HOM05D005817 ORTHO05D007140 6.8e-117 424.5 297 73.7
Nn5g27184 Nelumbo nucifera HOM05D005817 ORTHO05D007140 8.8e-117 424.1 303 73.9
FvH4_5g27830 Fragaria vesca HOM05D005817 ORTHO05D007140 2.0e-116 422.9 299 72.6
FAN18G1253 Fragaria x ananassa HOM05D005817 ORTHO05D007140 2.0e-116 422.9 299 72.6
Atru.chr6.226 Acer truncatum HOM05D005817 ORTHO05D007140 4.4e-116 421.8 301 74.8
Aqoxy6G00025 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 1.7e-115 419.9 303 71.9
Actinidia01635 Actinidia chinensis HOM05D005817 ORTHO05D007140 4.8e-115 418.3 301 73.8
Glyma.17G001900 Glycine max HOM05D005817 ORTHO05D007140 5.4e-114 414.8 253 85.8
ATR1089G128 Amborella trichopoda HOM05D005817 ORTHO05D007140 7.0e-114 414.5 303 72.3
PSO017G5300 Papaver somniferum HOM05D005817 ORTHO05D007140 7.0e-114 414.5 304 71.7
COL.COLO4_31118 Corchorus olitorius HOM05D005817 ORTHO05D007140 1.2e-113 413.7 330 68.5
PSO170G5162 Papaver somniferum HOM05D005817 ORTHO05D007140 2.0e-113 412.9 304 71.4
THA.LOC104824089 Tarenaya hassleriana HOM05D005817 ORTHO05D007140 7.7e-113 411.0 288 73.6
Haze_09983 Corylus avellana HOM05D005817 ORTHO05D007140 6.5e-112 407.9 363 62.3
Sp2g13800 Schrenkiella parvula HOM05D005817 ORTHO05D007140 1.5e-111 406.8 303 70.3
SGA_v2.0_scaffold8G04460 Striga asiatica HOM05D005817 ORTHO05D007140 1.9e-111 406.4 296 72.0
CDE07G1199 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.2e-110 403.7 294 73.1
Thhalv10004677m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 1.6e-110 403.3 303 70.0
EL10Ac6g13990 Beta vulgaris HOM05D005817 ORTHO05D007140 2.1e-110 402.9 303 69.0
Carub.0005s0157 Capsella rubella HOM05D005817 ORTHO05D007140 6.1e-110 401.4 303 70.3
Rhsim05G0115500 Rhododendron simsii HOM05D005817 ORTHO05D007140 1.4e-109 400.2 351 62.7
Lsat_1_v5_gn_9_83341 Lactuca sativa HOM05D005817 ORTHO05D007140 6.8e-109 397.9 303 70.6
CDE08G0344 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.5e-108 396.7 294 72.4
Lj9C259G5 Lonicera japonica HOM05D001465 ORTHO05D001434 2.0e-108 396.4 285 74.7
ClCG11G000310 Citrullus lanatus HOM05D005817 ORTHO05D007140 4.4e-108 395.2 313 70.3
Ah.03g136770 Amaranthus hybridus HOM05D005817 ORTHO05D007140 7.5e-108 394.4 322 64.3
AT2G02570 Arabidopsis thaliana HOM05D005817 ORTHO05D007140 9.8e-108 394.0 306 67.0
Migut.N00865 Erythranthe guttata HOM05D005817 ORTHO05D007140 1.3e-107 393.7 297 68.7
HanXRQChr15g0469671 Helianthus annuus HOM05D005817 ORTHO05D007140 2.2e-107 392.9 303 69.3
FAN04G1604 Fragaria x ananassa HOM05D005817 ORTHO05D007140 6.3e-107 391.3 367 58.9
C07p33290 Brassica napus HOM05D005817 ORTHO05D007140 8.3e-107 391.0 299 69.2
BolC7t43840H Brassica oleracea HOM05D005817 ORTHO05D007140 8.3e-107 391.0 299 69.2
BcaC06g31224 Brassica carinata HOM05D005817 ORTHO05D007140 1.4e-106 390.2 296 70.3
A06p43560 Brassica napus HOM05D005817 ORTHO05D007140 1.6e-105 386.7 299 68.9
BcaC03g17157 Brassica carinata HOM05D005817 ORTHO05D007140 3.8e-104 382.1 300 68.3
vmacro19830 Vaccinium macrocarpon HOM05D005817 ORTHO05D007140 5.0e-104 381.7 280 71.4
Manes.10G106400 Manihot esculenta HOM05D005817 ORTHO05D007140 1.1e-103 380.6 253 78.3
Potri.004G229200 Populus trichocarpa HOM05D005817 ORTHO05D007140 5.6e-103 378.3 253 77.9
BraA06t27241Z Brassica rapa HOM05D005817 ORTHO05D007140 9.5e-103 377.5 325 64.0
VMungo1215G1434 Vigna mungo HOM05D005817 ORTHO05D007140 2.8e-102 375.9 206 90.8
MBI06_g16620_MAGBIO Magnolia biondii HOM05D005817 ORTHO05D007140 3.6e-102 375.6 263 75.7
Peaxi162Scf00011g01920 Petunia axillaris HOM05D005817 ORTHO05D007140 1.4e-101 373.6 338 60.7
Manes.07G030600 Manihot esculenta HOM05D005817 ORTHO05D007140 1.8e-101 373.2 253 77.5
Hund15375 Selenicereus undatus HOM05D005817 ORTHO05D007140 5.2e-101 371.7 275 71.6
GSVIVG01023145001 Vitis vinifera HOM05D005817 ORTHO05D007140 1.3e-99 367.1 256 76.6
AUR62043876 Chenopodium quinoa HOM05D005817 ORTHO05D007140 8.3e-99 364.4 280 68.9
ECA236G3641 Erigeron canadensis HOM05D000284 ORTHO05D000805 2.4e-98 362.8 275 70.2
Aa31LG2G7570 Aethionema arabicum HOM05D005817 ORTHO05D007140 2.0e-97 359.8 323 61.6
Dinv29679 Davidia involucrata HOM05D005817 ORTHO05D007140 7.8e-97 357.8 256 73.8
unitig_22.g6849 Utricularia gibba HOM05D005817 ORTHO05D007140 6.6e-96 354.8 332 60.8
C02p50820 Brassica napus HOM05D005817 ORTHO05D007140 9.5e-95 350.9 289 65.4
Sc03g0006230 Simmondsia chinensis HOM05D005817 ORTHO05D007140 1.2e-94 350.5 207 83.6
FAN08G2336 Fragaria x ananassa HOM05D005817 ORTHO05D007140 1.6e-94 350.1 368 55.2
BolC2t11164H Brassica oleracea HOM05D005817 ORTHO05D007140 1.0e-93 347.4 292 64.4
SHI04993 Sapria himalayana HOM05D005817 ORTHO05D007140 4.0e-93 345.5 322 59.3
AL5G11840 Arabidopsis lyrata HOM05D005817 ORTHO05D007140 6.8e-93 344.7 259 70.7
Nitab4.5_0003247g0070 Nicotiana tabacum HOM05D005817 ORTHO05D007140 1.5e-92 343.6 243 75.3
Mapoly0107s0026 Marchantia polymorpha HOM05D005817 ORTHO05D007140 4.4e-92 342.0 296 61.1
Os08g0109900 Oryza sativa ssp. japonica HOM05D005817 ORTHO05D007140 4.9e-91 338.6 250 71.6
Sopen01g045430 Solanum pennellii HOM05D005817 ORTHO05D007140 1.4e-90 337.0 228 73.2
Lj5C284T7 Lonicera japonica HOM05D005817 ORTHO05D007140 1.2e-89 334.0 207 81.2
Duzib235G1547 Durio zibethinus HOM05D005817 ORTHO05D007140 2.7e-89 332.8 241 74.3
AUR62032450 Chenopodium quinoa HOM05D005817 ORTHO05D007140 8.6e-88 327.8 285 62.5
CDE04G1950 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.6e-86 323.6 248 70.6
Actinidia26194 Actinidia chinensis HOM05D005817 ORTHO05D007140 3.6e-86 322.4 310 61.6
A02p33050 Brassica napus HOM05D005817 ORTHO05D007140 3.6e-86 322.4 253 67.6
Pp3c10_3580 Physcomitrium patens HOM05D005817 ORTHO05D007140 2.6e-84 316.2 326 53.7
Aqoxy385s001 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 9.8e-84 314.3 303 59.7
HPP92_002041 Vanilla planifolia HOM05D005817 ORTHO05D007140 1.7e-83 313.5 256 66.0
CDE02G1227 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.2e-81 307.4 294 59.5
AagrBONN_evm.TU.Sc2ySwM_117.207 Anthoceros agrestis HOM05D005817 ORTHO05D007140 4.6e-81 305.4 286 57.0
Hma1.2p1_0052F.1_g030010 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 1.9e-79 300.1 185 82.2
BraA02t08326Z Brassica rapa HOM05D005817 ORTHO05D007140 2.1e-78 296.6 270 60.7
Cpa.g.sc173.14 Carica papaya HOM05D005817 ORTHO05D007140 2.8e-78 296.2 237 67.5
Lalb_Chr12g0195861 Lupinus albus HOM05D005817 ORTHO05D007140 2.0e-76 290.0 165 87.9
SMO117G0163 Selaginella moellendorffii HOM05D005817 ORTHO05D007140 6.0e-73 278.5 197 70.1
MSTRG.27880 Avicennia marina HOM05D005817 ORTHO05D007140 5.1e-72 275.4 228 64.9
Pp3c10_3582 Physcomitrium patens HOM05D005817 ORTHO05D007140 6.6e-72 275.0 247 57.9
Pp3c14_9240 Physcomitrium patens HOM05D005817 ORTHO05D007140 4.7e-70 268.9 291 51.9
CBR_g40810 Chara braunii HOM05D005817 ORTHO05D007140 1.8e-69 266.9 351 47.0
RcHm_v2.0_Chr5g0068831 Rosa chinensis HOM05D005817 ORTHO05D007140 2.2e-67 260.0 155 86.5
Pp3c1_22040 Physcomitrium patens HOM05D005817 ORTHO05D007140 1.6e-65 253.8 281 52.3
MSTRG.601 Avicennia marina HOM05D005817 ORTHO05D007140 9.6e-63 244.6 202 64.9
Dinv29634 Davidia involucrata HOM05D005817 ORTHO05D007140 5.8e-52 208.8 155 69.0
Zm00001eb174130 Zea mays HOM05D005817 ORTHO05D007140 1.6e-49 200.7 129 80.6
VMungo0766G0001 Vigna mungo HOM05D005817 ORTHO05D007140 1.5e-39 167.5 122 75.4
Cre02.g106550 Chlamydomonas reinhardtii HOM05D005817 ORTHO05D007140 3.4e-28 129.8 329 33.7
VMungo1148G0001 Vigna mungo HOM05D005817 ORTHO05D007140 3.2e-26 123.2 86 80.2
MCO12G229 Micromonas commoda HOM05D005817 ORTHO05D007140 7.2e-26 122.1 294 30.6
PRCOL_00002712 Prasinoderma coloniale HOM05D005817 ORTHO05D007140 1.8e-16 90.9 324 28.7
SEGI_07435 Sequoiadendron giganteum HOM05D005817 ORTHO05D007140 1.3e-14 84.7 90 50.0
FvH4_3g40414 Fragaria vesca HOM05D005817 ORTHO05D007140 2.2e-11 73.9 68 63.2
Lalb_Chr12g0195851 Lupinus albus HOM05D005817 ORTHO05D007140 2.9e-11 73.6 52 69.2
Thhalv10005196m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 5.0e-11 72.8 52 73.1
CARHR145100 Cardamine hirsuta HOM05D005817 ORTHO05D007140 9.4e-10 68.6 68 60.3
COL.COLO4_38165 Corchorus olitorius HOM05D011921 ORTHO05D160408 8.8e-08 62.0 181 33.1
CDE04G0373 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 2.6e-07 60.5 46 73.9


User provided reference genes

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