Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 4.2e-195 684.5 342 100.0
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 6.0e-141 504.6 342 79.2
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 2.4e-134 482.6 342 75.7
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 9.2e-134 480.7 341 75.1
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 1.0e-132 477.2 341 75.1
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 3.1e-129 465.7 340 72.6
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 2.6e-128 462.6 340 71.8
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 2.1e-125 453.0 342 70.8
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 1.3e-122 443.7 342 70.2
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 7.6e-120 434.5 342 68.1
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 9.9e-120 434.1 341 68.9
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 2.9e-119 432.6 342 67.5
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 9.9e-112 407.5 342 65.8
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 2.9e-111 406.0 342 62.9
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 3.8e-111 405.6 342 62.9
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 6.4e-111 404.8 342 65.5
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 2.1e-109 399.8 342 62.0
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 2.7e-109 399.4 342 64.3
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.8e-108 396.7 342 62.0
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 2.3e-108 396.4 342 62.9
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 2.5e-107 392.9 342 60.5
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 7.4e-107 391.3 342 61.1
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 3.7e-106 389.0 342 61.7
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 4.8e-106 388.7 342 60.2
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 6.2e-106 388.3 342 60.2
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 1.4e-105 387.1 342 60.8
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 1.4e-105 387.1 342 60.5
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.8e-105 386.7 342 60.2
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 3.1e-105 386.0 342 61.1
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 3.1e-105 386.0 344 61.6
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 4.0e-105 385.6 344 61.3
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 9.0e-105 384.4 342 60.2
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 3.4e-104 382.5 344 59.9
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 4.5e-104 382.1 342 60.2
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 7.6e-104 381.3 343 60.6
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 7.6e-104 381.3 341 60.1
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 1.7e-103 380.2 340 60.6
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 1.7e-103 380.2 341 59.2
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 2.2e-103 379.8 346 60.4
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 2.2e-103 379.8 346 60.4
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 2.9e-103 379.4 342 60.2
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 4.9e-103 378.6 342 59.6
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 6.5e-103 378.3 342 59.1
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 8.4e-103 377.9 342 59.9
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 1.9e-102 376.7 343 60.1
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 2.5e-102 376.3 343 58.6
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 3.2e-102 375.9 342 59.6
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 3.2e-102 375.9 342 59.6
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 5.5e-102 375.2 341 58.9
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 9.3e-102 374.4 343 59.8
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 1.2e-101 374.0 341 59.8
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 1.2e-101 374.0 342 59.4
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 1.6e-101 373.6 341 58.7
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 2.7e-101 372.9 342 59.1
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 7.9e-101 371.3 341 58.4
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 7.9e-101 371.3 342 57.9
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 1.3e-100 370.5 340 58.2
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 3.0e-100 369.4 342 58.8
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 3.9e-100 369.0 341 58.4
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 3.9e-100 369.0 341 58.7
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 3.9e-100 369.0 341 57.5
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 5.1e-100 368.6 340 58.2
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 5.1e-100 368.6 355 56.9
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 6.7e-100 368.2 354 57.6
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 8.7e-100 367.9 342 58.2
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 8.7e-100 367.9 344 59.3
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 1.1e-99 367.5 342 56.4
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 1.9e-99 366.7 341 58.1
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 2.5e-99 366.3 341 58.1
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 5.7e-99 365.2 341 58.1
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 7.4e-99 364.8 341 57.5
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.4e-97 360.5 342 57.3
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.4e-97 360.5 342 57.3
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 1.8e-97 360.1 344 58.4
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 1.8e-97 360.1 344 58.4
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 9.0e-97 357.8 342 57.9
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 1.5e-96 357.1 401 51.1
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 2.0e-96 356.7 341 56.3
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 2.6e-96 356.3 343 55.7
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 2.6e-96 356.3 342 56.7
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 7.6e-96 354.8 342 57.3
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 1.7e-95 353.6 326 59.5
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.7e-95 353.6 342 57.3
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.7e-95 353.6 342 56.1
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 6.5e-95 351.7 342 55.8
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 6.5e-95 351.7 342 55.8
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 1.4e-94 350.5 343 56.0
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 1.9e-94 350.1 342 56.1
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 1.9e-94 350.1 344 57.3
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 3.2e-94 349.4 342 56.4
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 4.2e-94 349.0 312 62.8
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 4.2e-94 349.0 342 55.6
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 5.5e-94 348.6 342 55.6
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 1.2e-93 347.4 345 55.7
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 2.7e-93 346.3 343 57.1
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 2.7e-93 346.3 342 55.3
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 4.6e-93 345.5 342 54.4
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 1.0e-92 344.4 342 56.1
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 3.9e-92 342.4 337 56.7
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 1.5e-91 340.5 344 54.1
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 2.5e-91 339.7 344 55.5
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 2.5e-91 339.7 343 55.7
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 4.3e-91 339.0 263 66.9
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 7.4e-91 338.2 340 55.6
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 9.7e-91 337.8 358 53.4
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 1.3e-90 337.4 325 56.6
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 1.4e-89 334.0 340 54.1
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 2.4e-89 333.2 342 53.2
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 3.1e-89 332.8 344 54.9
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 1.5e-88 330.5 333 55.0
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 3.4e-88 329.3 344 54.4
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 1.1e-86 324.3 264 62.9
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 5.5e-86 322.0 373 49.9
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 7.2e-86 321.6 344 54.7
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 4.7e-85 318.9 331 53.8
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 6.1e-85 318.5 345 52.8
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 1.0e-84 317.8 287 59.2
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 3.9e-84 315.8 262 62.6
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 5.1e-84 315.5 345 52.5
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 2.4e-81 306.6 344 52.0
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 3.1e-81 306.2 306 54.6
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 6.9e-81 305.1 273 59.0
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 9.1e-81 304.7 263 61.6
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 2.0e-80 303.5 403 46.4
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 5.9e-80 302.0 399 47.9
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 1.7e-79 300.4 301 54.8
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 9.4e-78 294.7 340 50.0
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 4.7e-77 292.4 339 49.3
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 6.1e-77 292.0 263 59.7
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 1.5e-75 287.3 331 51.1
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 2.0e-75 287.0 380 46.1
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 1.3e-74 284.3 216 70.4
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 2.2e-74 283.5 350 50.3
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 3.5e-72 276.2 265 57.7
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 2.9e-71 273.1 356 47.2
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 8.0e-69 265.0 342 47.4
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 3.1e-65 253.1 339 44.5
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 3.5e-64 249.6 213 60.6
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 5.9e-64 248.8 216 62.5
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 4.7e-61 239.2 263 51.3
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 1.3e-58 231.1 339 43.1
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 1.7e-58 230.7 233 55.4
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 4.8e-58 229.2 301 45.2
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 1.1e-57 228.0 346 40.8
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 7.0e-57 225.3 213 57.7
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 1.6e-56 224.2 295 45.1
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 3.3e-54 216.5 334 42.2
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 4.2e-54 216.1 201 57.7
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.5e-51 207.6 214 52.8
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 2.6e-51 206.8 130 74.6
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 9.8e-51 204.9 194 57.2
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 1.3e-50 204.5 332 39.2
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 9.2e-49 198.4 332 38.0
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 3.5e-48 196.4 194 56.7
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 2.3e-47 193.7 200 53.0
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 6.1e-45 185.7 316 39.6
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 1.5e-43 181.0 191 52.4
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 2.2e-42 177.2 285 41.1
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 3.0e-39 166.8 266 41.4
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 9.5e-38 161.8 191 49.7
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 9.5e-38 161.8 229 43.7
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 6.2e-37 159.1 138 60.9
Gohir.D07G231366 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.3e-36 157.1 165 52.1
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 7.5e-35 152.1 265 37.0
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 6.4e-34 149.1 205 44.9
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.1e-28 131.7 214 38.8
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.5e-27 127.9 195 41.5
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 2.2e-26 124.0 214 36.9
Oeu033726.1 Olea europaea HOM05D001715 ORTHO05D004824 1.9e-25 120.9 126 54.0
CiPaw.15G158300 Carya illinoinensis HOM05D001715 ORTHO05D004824 2.4e-25 120.6 69 78.3
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 8.6e-23 112.1 180 42.8
CiPaw.15G157800 Carya illinoinensis HOM05D001715 ORTHO05D004824 8.6e-23 112.1 69 73.9
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 1.5e-22 111.3 74 71.6
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 1.9e-17 94.4 74 63.5
vmacro18297 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 2.1e-16 90.9 67 64.2
Mapoly0009s0091 Marchantia polymorpha HOM05D001715 ORTHO05D004824 3.9e-15 86.7 191 33.5
SEGI_06119 Sequoiadendron giganteum HOM05D001715 ORTHO05D000497 1.6e-08 64.7 41 73.2
CSS0027227 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 6.0e-08 62.8 40 80.0
CSS0016932 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 7.8e-08 62.4 42 73.8
Medtr3g063430 Medicago truncatula HOM05D001715 ORTHO05D259122 7.8e-08 62.4 38 76.3
CSS0014250 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 2.3e-07 60.8 34 88.2


User provided reference genes

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