Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12143_v3 Cicer arietinum L. HOM05D006602 ORTHO05D007927 5.6e-220 767.3 385 100.0
Medtr1g041735 Medicago truncatula HOM05D006602 ORTHO05D007927 1.9e-135 486.5 404 68.1
Psat6g105120 Pisum sativum HOM05D006602 ORTHO05D007927 9.1e-130 467.6 404 67.1
TPR.G25155 Trifolium pratense HOM05D006602 ORTHO05D007927 1.9e-127 459.9 407 66.1
Glyma.10G005000 Glycine max HOM05D006602 ORTHO05D007927 1.1e-111 407.5 402 58.2
Lj6g0020892 Lotus japonicus HOM05D006602 ORTHO05D007927 5.6e-111 405.2 407 60.7
VMungo0720G1075 Vigna mungo HOM05D006602 ORTHO05D007927 2.0e-105 386.7 408 58.1
Lalb_Chr01g0021011 Lupinus albus HOM05D006602 ORTHO05D007927 1.6e-97 360.5 403 55.1
Glyma.02G003600 Glycine max HOM05D006602 ORTHO05D007927 2.0e-76 290.4 296 58.1
Atru.chr4.1980 Acer truncatum HOM05D006602 ORTHO05D007927 1.1e-58 231.5 406 40.1
GSVIVG01027871001 Vitis vinifera HOM05D006602 ORTHO05D007927 3.5e-57 226.5 395 40.3
Dinv27089 Davidia involucrata HOM05D006602 ORTHO05D007927 1.0e-56 224.9 416 37.7
CiPaw.01G180800 Carya illinoinensis HOM05D006602 ORTHO05D007927 1.8e-56 224.2 411 40.4
QL06p020003 Quercus lobata HOM05D006602 ORTHO05D007927 5.1e-56 222.6 416 39.2
Cfa014754 Carpinus fangiana HOM05D006602 ORTHO05D007927 1.9e-55 220.7 419 37.5
TWI09G0121 Tripterygium wilfordii HOM05D006602 ORTHO05D007927 8.2e-54 215.3 405 37.5
TWI09G1114 Tripterygium wilfordii HOM05D006602 ORTHO05D007927 8.2e-54 215.3 405 37.5
TAR636G1896 Trochodendron aralioides HOM05D006602 ORTHO05D007927 8.2e-54 215.3 400 40.0
Manes.03G161700 Manihot esculenta HOM05D006602 ORTHO05D007927 2.6e-52 210.3 402 38.3
MBI10_g19236_MAGBIO Magnolia biondii HOM05D006602 ORTHO05D007927 3.4e-52 209.9 393 38.2
Sabra08G0129700 Salix brachista HOM05D006602 ORTHO05D007927 1.0e-51 208.4 397 38.5
Ciclev10004248m.g Citrus clementina HOM05D006602 ORTHO05D007927 2.2e-51 207.2 411 37.0
CANSAT78G1730 Cannabis sativa HOM05D006602 ORTHO05D007927 6.5e-51 205.7 413 37.8
ECA248G0430 Erigeron canadensis HOM05D006602 ORTHO05D007927 2.5e-50 203.8 394 39.3
Cc03_g05910 Coffea canephora HOM05D006602 ORTHO05D007927 4.2e-50 203.0 427 38.6
Nitab4.5_0001425g0110 Nicotiana tabacum HOM05D006602 ORTHO05D007927 4.2e-50 203.0 443 35.2
HanXRQChr04g0115381 Helianthus annuus HOM05D006602 ORTHO05D007927 5.5e-50 202.6 390 37.9
MD13G1218500 Malus domestica HOM05D006602 ORTHO05D007927 5.5e-50 202.6 411 36.7
Peaxi162Scf00602g00056 Petunia axillaris HOM05D006602 ORTHO05D007927 7.1e-50 202.2 443 34.3
RcHm_v2.0_Chr4g0394621 Rosa chinensis HOM05D006602 ORTHO05D007927 7.1e-50 202.2 397 36.8
Lj6A624G54 Lonicera japonica HOM05D006602 ORTHO05D007927 2.1e-49 200.7 471 35.5
Nn2g12538 Nelumbo nucifera HOM05D006602 ORTHO05D007927 6.0e-49 199.1 421 38.2
Aqoxy5G00174 Aquilegia oxysepala HOM05D006602 ORTHO05D007927 3.9e-48 196.4 397 35.8
DCAR_002305 Daucus carota HOM05D006602 ORTHO05D007927 3.9e-48 196.4 436 34.9
Thhalv10016911m.g Eutrema salsugineum HOM05D006602 ORTHO05D007927 3.9e-48 196.4 384 37.2
SGA_v2.0_scaffold67G22733 Striga asiatica HOM05D006602 ORTHO05D007927 5.1e-48 196.1 450 36.4
Nitab4.5_0006936g0050 Nicotiana tabacum HOM05D006602 ORTHO05D007927 3.3e-47 193.4 478 32.8
Oeu002939.1 Olea europaea HOM05D006602 ORTHO05D007927 3.3e-47 193.4 386 37.8
vmacro15464 Vaccinium macrocarpon HOM05D006602 ORTHO05D007927 4.3e-47 193.0 413 37.5
ATR0736G103 Amborella trichopoda HOM05D006602 ORTHO05D007927 9.7e-47 191.8 432 35.0
MSTRG.9876 Avicennia marina HOM05D006602 ORTHO05D007927 9.7e-47 191.8 431 35.3
Rhsim02G0042400 Rhododendron simsii HOM05D006602 ORTHO05D007927 1.6e-46 191.0 416 36.3
AL4G29110 Arabidopsis lyrata HOM05D006602 ORTHO05D007927 2.2e-46 190.7 383 34.5
FvH4_4g04160 Fragaria vesca HOM05D006602 ORTHO05D007927 2.8e-46 190.3 411 34.1
CSS0038498 Camellia sinensis var. sinensis HOM05D006602 ORTHO05D007927 1.1e-45 188.3 419 35.1
PSO423G0061 Papaver somniferum HOM05D006602 ORTHO05D007927 1.1e-45 188.3 411 37.2
CDE02G3785 Ceratophyllum demersum HOM05D006602 ORTHO05D007927 4.1e-45 186.4 412 34.5
AUR62002172 Chenopodium quinoa HOM05D006602 ORTHO05D007927 6.9e-45 185.7 435 34.5
Migut.G00495 Erythranthe guttata HOM05D006602 ORTHO05D007927 9.0e-45 185.3 391 35.3
FAN22G1758 Fragaria x ananassa HOM05D006602 ORTHO05D007927 9.0e-45 185.3 405 34.3
Sopen09g033330 Solanum pennellii HOM05D006602 ORTHO05D007927 9.0e-45 185.3 468 31.6
Aa31LG5G3850 Aethionema arabicum HOM05D006602 ORTHO05D007927 1.5e-44 184.5 384 35.2
Sc13g0005920 Simmondsia chinensis HOM05D006602 ORTHO05D007927 1.5e-44 184.5 411 34.3
Cpa.g.sc44.24 Carica papaya HOM05D006602 ORTHO05D007927 2.6e-44 183.7 393 35.6
BraA03t11135Z Brassica rapa HOM05D006602 ORTHO05D007927 3.4e-44 183.3 392 33.4
Prupe.1G045200 Prunus persica HOM05D006602 ORTHO05D007927 3.4e-44 183.3 407 35.4
AUR62015537 Chenopodium quinoa HOM05D006602 ORTHO05D007927 4.5e-44 183.0 437 34.8
THA.LOC104801076 Tarenaya hassleriana HOM05D006602 ORTHO05D007927 5.9e-44 182.6 384 35.9
Potri.010G068400 Populus trichocarpa HOM05D006602 ORTHO05D007927 7.6e-44 182.2 406 36.2
Eucgr.H02994 Eucalyptus grandis HOM05D006602 ORTHO05D007927 1.0e-43 181.8 410 35.4
C03p21910 Brassica napus HOM05D006602 ORTHO05D007927 1.3e-43 181.4 392 33.9
AT2G33435 Arabidopsis thaliana HOM05D006602 ORTHO05D007927 1.7e-43 181.0 384 34.6
CARHR127450 Cardamine hirsuta HOM05D006602 ORTHO05D007927 2.2e-43 180.6 388 35.8
A03p18750 Brassica napus HOM05D006602 ORTHO05D007927 2.9e-43 180.3 392 33.4
Carub.0004s1507 Capsella rubella HOM05D006602 ORTHO05D007927 5.0e-43 179.5 387 34.9
Sabra10G0038600 Salix brachista HOM05D006602 ORTHO05D007927 6.5e-43 179.1 411 36.3
COL.COLO4_15932 Corchorus olitorius HOM05D006602 ORTHO05D007927 1.1e-42 178.3 499 32.5
CsaV3_2G012590 Cucumis sativus L. HOM05D006602 ORTHO05D007927 1.1e-42 178.3 396 34.3
Hund11918 Selenicereus undatus HOM05D006602 ORTHO05D007927 7.2e-42 175.6 427 33.5
PGR004G1839 Punica granatum HOM05D006602 ORTHO05D007927 9.3e-42 175.3 407 35.9
PSO079G0005 Papaver somniferum HOM05D006602 ORTHO05D007927 1.2e-41 174.9 399 35.3
FAN17G1576 Fragaria x ananassa HOM05D006602 ORTHO05D007927 1.6e-41 174.5 411 33.6
Sed0025551 Sechium edule HOM05D006602 ORTHO05D007927 2.1e-41 174.1 410 33.9
FAN12G1920 Fragaria x ananassa HOM05D006602 ORTHO05D007927 2.7e-41 173.7 411 33.1
HPP92_005119 Vanilla planifolia HOM05D006602 ORTHO05D007927 6.1e-41 172.6 386 33.4
Thecc.04G260100 Theobroma cacao HOM05D006602 ORTHO05D007927 1.8e-40 171.0 509 30.8
BolC3t14573H Brassica oleracea HOM05D006602 ORTHO05D007927 3.0e-40 170.2 404 32.4
Solyc09g090420.4 Solanum lycopersicum HOM05D006602 ORTHO05D007927 8.8e-40 168.7 466 30.3
ClCG06G007140 Citrullus lanatus HOM05D006602 ORTHO05D007927 1.5e-39 167.9 427 34.4
Haze_11429 Corylus avellana HOM05D006602 ORTHO05D007927 1.9e-39 167.5 342 38.3
unitig_32.g10852 Utricularia gibba HOM05D006602 ORTHO05D007927 2.2e-38 164.1 412 31.3
EL10Ac3g04970 Beta vulgaris HOM05D006602 ORTHO05D007927 3.7e-38 163.3 407 34.2
SalBow3G2492 Salvia bowleyana HOM05D006602 ORTHO05D007927 1.4e-37 161.4 417 33.6
Gohir.D10G157900 Gossypium hirsutum HOM05D006602 ORTHO05D007927 4.5e-36 156.4 506 30.8
MELO3C023018.2 Cucumis melo HOM05D006602 ORTHO05D007927 1.0e-35 155.2 395 32.2
Gorai.011G177400 Gossypium raimondii HOM05D006602 ORTHO05D007927 1.0e-35 155.2 501 30.5
Gohir.A10G109300 Gossypium hirsutum HOM05D006602 ORTHO05D007927 2.1e-33 147.5 502 28.7
Lsat_1_v5_gn_1_75121 Lactuca sativa HOM05D006602 ORTHO05D007927 3.9e-32 143.3 175 45.7
SEGI_08720 Sequoiadendron giganteum HOM05D006602 ORTHO05D007927 6.7e-32 142.5 340 33.2
Mapoly0007s0229 Marchantia polymorpha HOM05D006602 ORTHO05D007927 3.3e-31 140.2 397 30.5
Phvul.007G275200 Phaseolus vulgaris HOM05D006602 ORTHO05D007927 2.0e-28 131.0 123 60.2
Os01g0956600 Oryza sativa ssp. japonica HOM05D006602 ORTHO05D007927 1.9e-26 124.4 163 44.2
RcHm_v2.0_Chr4g0394661 Rosa chinensis HOM05D006602 ORTHO05D007927 2.5e-26 124.0 182 41.2
Hma1.2p1_0385F.1_g141200 Hydrangea macrophylla HOM05D006602 ORTHO05D007927 1.2e-25 121.7 170 46.5
Glyma.02G003650 Glycine max HOM05D006602 ORTHO05D007927 3.3e-23 113.6 86 65.1
Zm00001eb402770 Zea mays HOM05D006602 ORTHO05D007927 2.2e-22 110.9 152 45.4
AagrBONN_evm.TU.Sc2ySwM_344.2542 Anthoceros agrestis HOM05D006602 ORTHO05D007927 1.8e-21 107.8 158 41.1
TAR365G0143 Trochodendron aralioides HOM05D006602 ORTHO05D007927 1.0e-16 92.0 105 50.5
Duzib151G0058 Durio zibethinus HOM05D006602 ORTHO05D007927 1.2e-07 62.0 228 26.8
SEGI_21623 Sequoiadendron giganteum HOM05D001563 ORTHO05D001956 1.5e-07 61.6 139 33.1
Cpa.g.sc27.62 Carica papaya HOM05D001563 ORTHO05D001956 4.4e-07 60.1 127 33.9
arahy.Tifrunner.gnm1.ann1.272FN3 Arachis hypogaea HOM05D001563 ORTHO05D001956 5.7e-07 59.7 122 35.2
CSS0040961 Camellia sinensis var. sinensis HOM05D001563 ORTHO05D001956 7.5e-07 59.3 124 33.9
CSS0047490 Camellia sinensis var. sinensis HOM05D001563 ORTHO05D001956 7.5e-07 59.3 124 33.9
Lj3g0003616 Lotus japonicus HOM05D001563 ORTHO05D001956 7.5e-07 59.3 124 33.9
Ca_13978_v3 Cicer arietinum L. HOM05D001563 ORTHO05D001956 9.8e-07 58.9 138 31.9
Lalb_Chr01g0000001 Lupinus albus HOM05D001563 ORTHO05D001956 9.8e-07 58.9 148 32.4
Lalb_Chr20g0121971 Lupinus albus HOM05D001563 ORTHO05D001956 9.8e-07 58.9 226 26.5
Medtr3g005670 Medicago truncatula HOM05D001563 ORTHO05D001956 9.8e-07 58.9 138 31.9
Glyma.06G324000 Glycine max HOM05D001563 ORTHO05D001956 1.3e-06 58.5 122 34.4
HanXRQChr09g0262121 Helianthus annuus HOM05D001563 ORTHO05D001956 1.3e-06 58.5 183 26.2
HanXRQChr11g0324861 Helianthus annuus HOM05D001563 ORTHO05D001956 1.3e-06 58.5 184 25.5
Psat1g004880 Pisum sativum HOM05D001563 ORTHO05D001956 1.3e-06 58.5 138 31.9
QL06p045494 Quercus lobata HOM05D001563 ORTHO05D001956 1.3e-06 58.5 123 33.3
MD15G1265800 Malus domestica HOM05D001563 ORTHO05D001956 1.7e-06 58.2 180 29.4
Phvul.005G001300 Phaseolus vulgaris HOM05D001563 ORTHO05D001956 1.7e-06 58.2 124 33.1
PSO782G3279 Papaver somniferum HOM05D001563 ORTHO05D001956 2.2e-06 57.8 116 31.9
VMungo1080G1798 Vigna mungo HOM05D001563 ORTHO05D001956 2.2e-06 57.8 124 33.1
MELO3C011498.2 Cucumis melo HOM05D001563 ORTHO05D001956 2.8e-06 57.4 126 34.1
CsaV3_6G003130 Cucumis sativus L. HOM05D001563 ORTHO05D001956 2.8e-06 57.4 126 34.1
Glyma.04G255700 Glycine max HOM05D001563 ORTHO05D001956 2.8e-06 57.4 147 33.3
Peaxi162Scf00498g00117 Petunia axillaris HOM05D001563 ORTHO05D001956 2.8e-06 57.4 121 29.8
Manes.04G048700 Manihot esculenta HOM05D001563 ORTHO05D001956 4.8e-06 56.6 123 33.3
Medtr2g013130 Medicago truncatula HOM05D001563 ORTHO05D001956 4.8e-06 56.6 171 30.4
Actinidia36546 Actinidia chinensis HOM05D001563 ORTHO05D001956 6.3e-06 56.2 128 32.8
ECA232G2130 Erigeron canadensis HOM05D001563 ORTHO05D001956 6.3e-06 56.2 179 25.7
Lj2C449T7 Lonicera japonica HOM05D001563 ORTHO05D001956 6.3e-06 56.2 121 31.4
Nitab4.5_0005471g0020 Nicotiana tabacum HOM05D001563 ORTHO05D001956 6.3e-06 56.2 178 27.5
arahy.Tifrunner.gnm1.ann1.7FJL8T Arachis hypogaea HOM05D001563 ORTHO05D001956 8.3e-06 55.8 115 35.7
MSTRG.13184 Avicennia marina HOM05D001563 ORTHO05D001956 8.3e-06 55.8 130 30.8
ClCG08G003940 Citrullus lanatus HOM05D001563 ORTHO05D001956 8.3e-06 55.8 126 33.3
Lalb_Chr15g0080491 Lupinus albus HOM05D001563 ORTHO05D001956 8.3e-06 55.8 149 32.2
SGA_v2.0_scaffold159G37663 Striga asiatica HOM05D001563 ORTHO05D001956 8.3e-06 55.8 125 32.0


User provided reference genes

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