Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12140_v3 Cicer arietinum L. HOM05D006602 ORTHO05D007927 8.7e-249 863.2 448 100.0
Ca_12142_v3 Cicer arietinum L. HOM05D006602 ORTHO05D007927 8.7e-249 863.2 448 100.0
TPR.G25155 Trifolium pratense HOM05D006602 ORTHO05D007927 1.9e-126 456.8 693 45.2
Psat6g105120 Pisum sativum HOM05D006602 ORTHO05D007927 6.2e-122 441.8 633 47.6
Medtr1g041735 Medicago truncatula HOM05D006602 ORTHO05D007927 1.5e-115 420.6 692 43.2
Phvul.007G275200 Phaseolus vulgaris HOM05D006602 ORTHO05D007927 3.4e-112 409.5 560 48.6
VMungo0720G1075 Vigna mungo HOM05D006602 ORTHO05D007927 4.9e-111 405.6 585 47.7
Lj6g0020892 Lotus japonicus HOM05D006602 ORTHO05D007927 5.5e-110 402.1 590 46.6
Glyma.10G005000 Glycine max HOM05D006602 ORTHO05D007927 1.9e-107 393.7 571 46.9
Lalb_Chr01g0021011 Lupinus albus HOM05D006602 ORTHO05D007927 3.3e-99 366.3 574 44.9
arahy.Tifrunner.gnm1.ann1.B5VTGG Arachis hypogaea HOM05D006602 ORTHO05D007927 7.7e-80 302.0 563 41.0
Haze_11431 Corylus avellana HOM05D006602 ORTHO05D003510 1.4e-65 254.6 500 39.4
GSVIVG01027871001 Vitis vinifera HOM05D006602 ORTHO05D007927 1.4e-65 254.6 433 43.2
QL06p020003 Quercus lobata HOM05D006602 ORTHO05D007927 7.0e-65 252.3 530 37.9
Dinv27089 Davidia involucrata HOM05D006602 ORTHO05D007927 8.6e-63 245.4 539 36.5
CiPaw.01G180800 Carya illinoinensis HOM05D006602 ORTHO05D007927 1.6e-61 241.1 497 39.4
Cfa014754 Carpinus fangiana HOM05D006602 ORTHO05D007927 3.6e-61 240.0 501 38.7
Manes.03G161700 Manihot esculenta HOM05D006602 ORTHO05D007927 6.8e-60 235.7 499 36.5
TAR636G1896 Trochodendron aralioides HOM05D006602 ORTHO05D007927 9.8e-59 231.9 530 36.2
CSS0038498 Camellia sinensis var. sinensis HOM05D006602 ORTHO05D007927 1.3e-58 231.5 537 36.7
Prupe.1G045200 Prunus persica HOM05D006602 ORTHO05D007927 4.1e-57 226.5 501 38.3
Eucgr.H02994 Eucalyptus grandis HOM05D006602 ORTHO05D007927 7.0e-57 225.7 529 35.5
Sabra10G0038600 Salix brachista HOM05D006602 ORTHO05D007927 9.2e-57 225.3 499 37.3
MD13G1218500 Malus domestica HOM05D006602 ORTHO05D007927 1.2e-56 224.9 527 34.3
Potri.010G068400 Populus trichocarpa HOM05D006602 ORTHO05D007927 5.9e-56 222.6 499 36.9
FAN17G1576 Fragaria x ananassa HOM05D006602 ORTHO05D007927 6.6e-55 219.2 486 37.2
MBI10_g19236_MAGBIO Magnolia biondii HOM05D006602 ORTHO05D007927 6.6e-55 219.2 504 36.1
Cpa.g.sc44.23 Carica papaya HOM05D006602 ORTHO05D007927 2.5e-54 217.2 498 34.5
Duzib151G0058 Durio zibethinus HOM05D006602 ORTHO05D007927 2.5e-54 217.2 499 36.1
FvH4_4g04160 Fragaria vesca HOM05D006602 ORTHO05D007927 4.3e-54 216.5 526 36.7
FAN22G1758 Fragaria x ananassa HOM05D006602 ORTHO05D007927 4.3e-54 216.5 487 37.2
Gorai.011G177400 Gossypium raimondii HOM05D006602 ORTHO05D007927 4.3e-54 216.5 524 35.7
TWI09G0121 Tripterygium wilfordii HOM05D006602 ORTHO05D007927 7.3e-54 215.7 498 37.8
TWI09G1114 Tripterygium wilfordii HOM05D006602 ORTHO05D007927 7.3e-54 215.7 498 37.8
Gohir.D10G157900 Gossypium hirsutum HOM05D006602 ORTHO05D007927 9.5e-54 215.3 524 35.7
Lj6A624G54 Lonicera japonica HOM05D006602 ORTHO05D007927 9.5e-54 215.3 496 36.1
RcHm_v2.0_Chr4g0394621 Rosa chinensis HOM05D006602 ORTHO05D007927 9.5e-54 215.3 491 36.5
Gohir.A10G109300 Gossypium hirsutum HOM05D006602 ORTHO05D007927 3.6e-53 213.4 524 35.5
Thecc.04G260100 Theobroma cacao HOM05D006602 ORTHO05D007927 2.3e-52 210.7 501 35.5
Hund11918 Selenicereus undatus HOM05D006602 ORTHO05D007927 3.4e-51 206.8 496 37.1
Oeu002938.1 Olea europaea HOM05D006602 ORTHO05D007927 9.8e-51 205.3 487 35.7
Sed0025551 Sechium edule HOM05D006602 ORTHO05D007927 9.8e-51 205.3 504 36.5
FAN12G1920 Fragaria x ananassa HOM05D006602 ORTHO05D007927 1.7e-50 204.5 488 35.5
Oeu002939.1 Olea europaea HOM05D006602 ORTHO05D007927 2.2e-50 204.1 487 35.7
Nn2g12538 Nelumbo nucifera HOM05D006602 ORTHO05D007927 2.9e-50 203.8 507 33.1
Sabra08G0129700 Salix brachista HOM05D006602 ORTHO05D007927 4.9e-50 203.0 495 36.4
EL10Ac3g04970 Beta vulgaris HOM05D006602 ORTHO05D007927 2.4e-49 200.7 240 51.2
ClCG06G007140 Citrullus lanatus HOM05D006602 ORTHO05D007927 7.0e-49 199.1 497 36.4
Rhsim02G0042400 Rhododendron simsii HOM05D006602 ORTHO05D007927 2.7e-48 197.2 580 32.9
AUR62015537 Chenopodium quinoa HOM05D006602 ORTHO05D007927 6.0e-48 196.1 346 41.3
Ciclev10004248m.g Citrus clementina HOM05D006602 ORTHO05D007927 7.8e-48 195.7 539 31.4
COL.COLO4_15932 Corchorus olitorius HOM05D006602 ORTHO05D007927 2.3e-47 194.1 503 34.6
PGR004G1839 Punica granatum HOM05D006602 ORTHO05D007927 2.3e-47 194.1 182 57.7
Atru.chr4.1980 Acer truncatum HOM05D006602 ORTHO05D007927 1.1e-46 191.8 639 29.0
AUR62002172 Chenopodium quinoa HOM05D006602 ORTHO05D007927 1.6e-45 188.0 320 42.8
vmacro15464 Vaccinium macrocarpon HOM05D006602 ORTHO05D007927 1.6e-45 188.0 593 32.4
HanXRQChr04g0115381 Helianthus annuus HOM05D006602 ORTHO05D007927 2.3e-44 184.1 464 33.4
Sc13g0005920 Simmondsia chinensis HOM05D006602 ORTHO05D007927 2.2e-42 177.6 506 33.0
CANSAT78G1730 Cannabis sativa HOM05D006602 ORTHO05D007927 3.7e-42 176.8 240 48.8
Cc03_g05910 Coffea canephora HOM05D006602 ORTHO05D007927 2.7e-40 170.6 202 51.0
Peaxi162Scf00602g00056 Petunia axillaris HOM05D006602 ORTHO05D007927 1.7e-39 167.9 287 41.8
Sopen09g033330 Solanum pennellii HOM05D006602 ORTHO05D007927 5.1e-39 166.4 245 46.9
ECA248G0430 Erigeron canadensis HOM05D006602 ORTHO05D007927 1.1e-38 165.2 349 39.0
Solyc09g090420.4 Solanum lycopersicum HOM05D006602 ORTHO05D007927 1.1e-38 165.2 245 46.5
Ah.04g155430 Amaranthus hybridus HOM05D006602 ORTHO05D007927 3.3e-38 163.7 380 37.9
Lsat_1_v5_gn_1_75121 Lactuca sativa HOM05D006602 ORTHO05D007927 3.3e-38 163.7 450 33.6
Migut.G00495 Erythranthe guttata HOM05D006602 ORTHO05D007927 7.3e-38 162.5 530 31.5
MSTRG.9876 Avicennia marina HOM05D006602 ORTHO05D007927 9.5e-38 162.2 553 30.9
ATR0736G103 Amborella trichopoda HOM05D006602 ORTHO05D007927 1.2e-37 161.8 482 32.4
MELO3C023018.2 Cucumis melo HOM05D006602 ORTHO05D007927 1.6e-37 161.4 258 43.0
HPP92_005119 Vanilla planifolia HOM05D006602 ORTHO05D007927 1.6e-37 161.4 493 33.3
CsaV3_2G012590 Cucumis sativus L. HOM05D006602 ORTHO05D007927 2.8e-37 160.6 280 40.4
Nitab4.5_0001425g0110 Nicotiana tabacum HOM05D006602 ORTHO05D007927 8.9e-36 155.6 534 30.9
Nitab4.5_0006936g0050 Nicotiana tabacum HOM05D006602 ORTHO05D007927 3.4e-35 153.7 532 30.8
THA.LOC104801076 Tarenaya hassleriana HOM05D006602 ORTHO05D007927 6.4e-34 149.4 500 31.0
PSO423G0061 Papaver somniferum HOM05D006602 ORTHO05D007927 9.2e-33 145.6 215 43.7
SalBow3G2492 Salvia bowleyana HOM05D006602 ORTHO05D007927 1.0e-31 142.1 362 33.7
CDE02G3785 Ceratophyllum demersum HOM05D006602 ORTHO05D007927 1.7e-31 141.4 307 39.1
unitig_32.g10852 Utricularia gibba HOM05D006602 ORTHO05D007927 2.3e-31 141.0 363 35.5
Aqoxy5G00174 Aquilegia oxysepala HOM05D006602 ORTHO05D007927 3.3e-30 137.1 273 38.8
SGA_v2.0_scaffold67G22733 Striga asiatica HOM05D006602 ORTHO05D007927 9.6e-30 135.6 562 27.9
TAR365G0143 Trochodendron aralioides HOM05D006602 ORTHO05D007927 1.6e-29 134.8 164 48.2
Zm00001eb402770 Zea mays HOM05D006602 ORTHO05D007927 6.2e-29 132.9 234 40.2
DCAR_002305 Daucus carota HOM05D006602 ORTHO05D007927 3.1e-28 130.6 585 27.4
Os03g0138100 Oryza sativa ssp. japonica HOM05D006602 ORTHO05D007927 6.8e-28 129.4 207 42.5
Carub.0004s1507 Capsella rubella HOM05D006602 ORTHO05D007927 8.9e-28 129.0 274 38.0
CARHR127450 Cardamine hirsuta HOM05D006602 ORTHO05D007927 8.9e-28 129.0 268 38.1
SEGI_13358 Sequoiadendron giganteum HOM05D006602 ORTHO05D007927 3.4e-27 127.1 245 38.8
Sp4g15780 Schrenkiella parvula HOM05D006602 ORTHO05D007927 2.9e-26 124.0 403 30.0
Aa31LG5G3850 Aethionema arabicum HOM05D006602 ORTHO05D007927 4.9e-26 123.2 331 34.4
Thhalv10016212m.g Eutrema salsugineum HOM05D006602 ORTHO05D007927 6.4e-26 122.9 331 32.3
AL4G29110 Arabidopsis lyrata HOM05D006602 ORTHO05D007927 2.4e-25 120.9 433 31.6
C03p21910 Brassica napus HOM05D006602 ORTHO05D007927 2.4e-25 120.9 348 33.0
AL7G46590 Arabidopsis lyrata HOM05D004545 ORTHO05D005420 7.1e-25 119.4 370 31.6
AT2G33435 Arabidopsis thaliana HOM05D006602 ORTHO05D007927 1.2e-24 118.6 274 35.0
BraA03t11135Z Brassica rapa HOM05D006602 ORTHO05D007927 1.2e-24 118.6 379 31.1
A03p18750 Brassica napus HOM05D006602 ORTHO05D007927 2.1e-24 117.9 348 32.5
BolC3t14573H Brassica oleracea HOM05D006602 ORTHO05D007927 4.6e-24 116.7 348 32.8
AagrBONN_evm.TU.Sc2ySwM_344.2542 Anthoceros agrestis HOM05D006602 ORTHO05D007927 2.3e-23 114.4 193 38.3
SHI00706 Sapria himalayana HOM05D006602 ORTHO05D007927 9.6e-22 109.0 466 27.7
Hma1.2p1_0385F.1_g141200 Hydrangea macrophylla HOM05D006602 ORTHO05D007927 4.0e-20 103.6 77 66.2
Mapoly0007s0229 Marchantia polymorpha HOM05D006602 ORTHO05D007927 1.3e-15 88.6 132 39.4
PSO079G0005 Papaver somniferum HOM05D006602 ORTHO05D007927 3.9e-15 87.0 251 32.7
Pp3c14_4860 Physcomitrium patens HOM05D006602 ORTHO05D007927 2.4e-12 77.8 352 25.3
TAR365G0802 Trochodendron aralioides HOM05D006602 ORTHO05D007927 3.1e-12 77.4 113 44.2
CBR_g39255 Chara braunii HOM05D001563 ORTHO05D007927 7.9e-08 62.8 105 34.3
Actinidia27205 Actinidia chinensis HOM05D006602 ORTHO05D007927 2.3e-07 61.2 41 68.3


User provided reference genes

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