Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11947_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 4.1e-182 641.3 340 100.0
Ca_03866_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.9e-99 366.7 312 70.2
Ca_03865_v3 Cicer arietinum L. HOM05D002644 ORTHO05D010767 1.8e-73 280.4 322 57.8
Ca_02603_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.5e-70 270.0 272 60.7
Ca_12564_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.6e-59 233.4 332 47.9
Ca_14618_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.7e-58 230.7 193 68.9
Psat0s797g0080 Pisum sativum HOM05D002954 ORTHO05D010767 1.6e-53 214.2 506 35.2
Ca_26542_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 3.7e-50 203.0 235 56.6
Ca_08360_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.4e-49 201.1 240 56.7
Ca_14409_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 4.5e-48 196.1 303 50.2
Ca_14703_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 5.0e-47 192.6 151 72.2
Ca_13669_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 3.0e-44 183.3 130 77.7
Ca_25752_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 9.1e-41 171.8 104 89.4
Ca_19080_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.9e-38 164.1 96 88.5
Ca_19703_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 3.0e-36 156.8 110 76.4
Psat0s2164g0040 Pisum sativum HOM05D000107 ORTHO05D010767 2.6e-35 153.7 295 37.6
Psat0s1103g0040 Pisum sativum HOM05D009226 ORTHO05D010767 1.3e-34 151.4 203 47.8
TPR.G33013 Trifolium pratense HOM05D009226 ORTHO05D010767 1.7e-34 151.0 140 61.4
TPR.G15912 Trifolium pratense HOM05D009226 ORTHO05D010767 2.7e-32 143.7 140 57.9
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 1.3e-31 141.4 266 36.5
Ca_02553_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 6.6e-31 139.0 95 83.2
Medtr8g040975 Medicago truncatula HOM05D009226 ORTHO05D010767 1.4e-28 131.3 142 57.0
Ca_23003_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 5.7e-27 125.9 180 46.7
Ca_30084_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 5.7e-27 125.9 180 46.7
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 1.3e-26 124.8 234 33.3
Psat0s4310g0080 Pisum sativum HOM05D016237 ORTHO05D010767 6.4e-26 122.5 171 48.0
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 6.4e-26 122.5 259 32.8
Ca_05048_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 8.3e-26 122.1 68 97.1
Peaxi162Scf00818g00410 Petunia axillaris HOM05D002954 ORTHO05D003353 3.2e-25 120.2 263 33.1
Medtr5g048720 Medicago truncatula HOM05D009226 ORTHO05D010767 5.4e-25 119.4 124 57.3
Ca_20168_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 7.0e-25 119.0 93 67.7
Ca_03135_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.9e-22 110.9 76 80.3
Peaxi162Scf00603g00522 Petunia axillaris HOM05D002954 ORTHO05D003353 1.9e-22 110.9 173 36.4
Medtr8g057120 Medicago truncatula HOM05D000107 ORTHO05D000062 3.3e-22 110.2 125 57.6
Lj2g0001970 Lotus japonicus HOM05D003938 ORTHO05D004759 9.5e-22 108.6 223 35.0
Peaxi162Scf00006g00207 Petunia axillaris HOM05D002954 ORTHO05D003353 1.6e-21 107.8 248 35.5
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 1.6e-21 107.8 209 33.0
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 4.4e-19 99.8 232 32.3
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 3.7e-18 96.7 214 29.9
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 3.7e-18 96.7 214 29.9
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 5.4e-17 92.8 214 29.4
Psat6g163120 Pisum sativum HOM05D009226 ORTHO05D010767 9.2e-17 92.0 131 48.9
Peaxi162Scf00039g00318 Petunia axillaris HOM05D002954 ORTHO05D003353 1.0e-15 88.6 228 29.8
Psat6g153520 Pisum sativum HOM05D009226 ORTHO05D010767 1.3e-15 88.2 137 45.3
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 1.7e-15 87.8 187 31.0
Peaxi162Scf00109g00210 Petunia axillaris HOM05D002954 ORTHO05D003353 1.7e-15 87.8 188 29.3
Medtr4g088560 Medicago truncatula HOM05D009226 ORTHO05D010767 2.3e-15 87.4 105 59.0
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 5.0e-15 86.3 154 31.8
Peaxi162Scf00914g00054 Petunia axillaris HOM05D002954 ORTHO05D003353 6.6e-15 85.9 100 39.0
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 1.1e-14 85.1 198 31.8
arahy.Tifrunner.gnm1.ann1.2IZ9JW Arachis hypogaea HOM05D002954 ORTHO05D003353 2.5e-14 84.0 129 32.6
Ca_27005_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 4.3e-14 83.2 216 35.6
Psat6g163080 Pisum sativum HOM05D002954 ORTHO05D010767 5.6e-14 82.8 87 58.6
arahy.Tifrunner.gnm1.ann1.DXNF3X Arachis hypogaea HOM05D002954 ORTHO05D003353 9.5e-14 82.0 255 25.9
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 1.2e-13 81.6 234 29.1
Ca_13696_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.1e-13 80.9 44 97.7
Medtr4g014530 Medicago truncatula HOM05D009226 ORTHO05D010767 2.1e-13 80.9 88 58.0
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.6e-13 80.1 188 28.7
TPR.G13772 Trifolium pratense HOM05D000107 ORTHO05D000062 6.2e-13 79.3 71 45.1
Lj2g0004380 Lotus japonicus HOM05D005022 ORTHO05D002200 8.1e-13 79.0 107 38.3
Lj1g0008605 Lotus japonicus HOM05D002954 ORTHO05D003353 1.4e-12 78.2 177 28.2
Lj1g0022399 Lotus japonicus HOM05D000107 ORTHO05D000062 1.4e-12 78.2 130 38.5
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 2.3e-12 77.4 217 27.2
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 3.1e-12 77.0 145 30.3
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 4.0e-12 76.6 213 26.8
Psat5g112160 Pisum sativum HOM05D002954 ORTHO05D010767 5.2e-12 76.3 66 57.6
ClCG06G005780 Citrullus lanatus HOM05D001309 ORTHO05D000385 6.8e-12 75.9 161 32.9
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 8.9e-12 75.5 174 32.2
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 1.2e-11 75.1 222 28.8
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.0e-11 74.3 264 26.1
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 3.4e-11 73.6 231 25.5
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 4.4e-11 73.2 230 29.6
Phvul.001G154901 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 4.4e-11 73.2 116 34.5
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 7.5e-11 72.4 187 26.2
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.3e-10 71.6 269 26.0
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.3e-10 71.6 269 26.0
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.7e-10 71.2 270 26.3
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.7e-10 71.2 269 26.0
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 1.7e-10 71.2 215 26.5
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.2e-10 70.9 271 26.2
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.9e-10 70.5 270 25.9
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 3.7e-10 70.1 198 29.3
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.9e-10 69.7 261 26.4
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-09 68.6 255 27.1
Nitab4.5_0002473g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-09 68.6 153 31.4
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.4e-09 68.2 259 25.5
arahy.Tifrunner.gnm1.ann1.HMQ64L Arachis hypogaea HOM05D002954 ORTHO05D003353 1.9e-09 67.8 165 32.7
Lj6g0018783 Lotus japonicus HOM05D002954 ORTHO05D000385 1.9e-09 67.8 68 47.1
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-09 67.8 191 28.3
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 2.4e-09 67.4 238 25.2
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 2.4e-09 67.4 218 26.1
Nitab4.5_0016483g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-09 67.4 183 27.9
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 2.4e-09 67.4 168 26.8
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.4e-09 67.4 192 28.1
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.4e-09 67.4 192 28.1
A09p47040 Brassica napus HOM05D008309 ORTHO05D010308 5.4e-09 66.2 214 29.4
Psat5g077200 Pisum sativum HOM05D000838 ORTHO05D000656 5.4e-09 66.2 42 85.7
TPR.G28307 Trifolium pratense HOM05D009226 ORTHO05D010767 5.4e-09 66.2 61 63.9
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 7.1e-09 65.9 148 31.8
A04p20790 Brassica napus HOM05D008309 ORTHO05D010308 9.2e-09 65.5 198 28.8
A09p31580 Brassica napus HOM05D008309 ORTHO05D010308 9.2e-09 65.5 173 30.1
BraA09t40169Z Brassica rapa HOM05D008309 ORTHO05D010308 9.2e-09 65.5 231 28.6
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-08 64.7 212 26.9
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.6e-08 64.7 155 28.4
AL1G66070 Arabidopsis lyrata HOM05D000107 ORTHO05D000062 2.1e-08 64.3 192 28.6
Ca_15955_v3 Cicer arietinum L. HOM05D000838 ORTHO05D000656 2.1e-08 64.3 54 68.5
Medtr3g101520 Medicago truncatula HOM05D000838 ORTHO05D000656 2.1e-08 64.3 61 62.3
TPR.G28118 Trifolium pratense HOM05D000838 ORTHO05D000656 2.1e-08 64.3 52 71.2
BolC2t10136H Brassica oleracea HOM05D008309 ORTHO05D010308 2.7e-08 63.9 204 29.9
BraA06t25453Z Brassica rapa HOM05D008309 ORTHO05D010308 2.7e-08 63.9 234 26.5
CSS0036507 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.7e-08 63.9 278 23.7
Ca_28084_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.7e-08 63.9 74 50.0
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 2.7e-08 63.9 174 27.0
BolC2t08113H Brassica oleracea HOM05D008309 ORTHO05D010308 4.6e-08 63.2 199 27.6
Ca_11755_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 4.6e-08 63.2 50 80.0
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 4.6e-08 63.2 195 28.7
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 4.6e-08 63.2 195 28.7
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 4.6e-08 63.2 219 24.2
AT1G40087 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 6.0e-08 62.8 242 26.9
Nitab4.5_0010441g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.0e-08 62.8 183 29.0
C04p50470 Brassica napus HOM05D008309 ORTHO05D010308 7.8e-08 62.4 234 27.4
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 7.8e-08 62.4 222 24.3
Phvul.L002237 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.0e-07 62.0 136 27.2
BolC4t26644H Brassica oleracea HOM05D008309 ORTHO05D010308 1.3e-07 61.6 234 26.1
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 1.3e-07 61.6 225 23.6
Psat3g063200 Pisum sativum HOM05D002954 ORTHO05D003353 1.3e-07 61.6 141 27.7
Psat5g043480 Pisum sativum HOM05D000838 ORTHO05D000656 1.3e-07 61.6 40 82.5
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 1.3e-07 61.6 231 23.4
TPR.G40235 Trifolium pratense HOM05D002954 ORTHO05D010767 1.3e-07 61.6 91 46.2
Phvul.001G118100 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 1.7e-07 61.2 163 30.7
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.3e-07 60.8 227 26.9
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.0e-07 60.5 176 29.0
MBI15_g16946_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.0e-07 60.5 191 27.7
Lj2g0015436 Lotus japonicus HOM05D002954 ORTHO05D010308 3.9e-07 60.1 55 47.3
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 3.9e-07 60.1 272 24.6
Psat6g222120 Pisum sativum HOM05D002954 ORTHO05D010767 3.9e-07 60.1 47 57.4
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 3.9e-07 60.1 172 26.2
arahy.Tifrunner.gnm1.ann1.CXU7YK Arachis hypogaea HOM05D010482 ORTHO05D000385 6.6e-07 59.3 236 23.3
Nitab4.5_0003879g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.6e-07 59.3 237 25.3
Phvul.008G147600 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 6.6e-07 59.3 91 34.1
BolC3t19893H Brassica oleracea HOM05D008309 ORTHO05D010308 8.6e-07 58.9 228 25.9
BolC8t50055H Brassica oleracea HOM05D008309 ORTHO05D010308 8.6e-07 58.9 228 25.9
BraA04t17652Z Brassica rapa HOM05D008309 ORTHO05D010308 8.6e-07 58.9 228 25.9
Lalb_Chr21g0312571 Lupinus albus HOM05D009128 ORTHO05D011389 8.6e-07 58.9 232 23.7
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-06 58.5 234 25.6
ECA236G1232 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.1e-06 58.5 147 31.3
Psat5g077240 Pisum sativum HOM05D000838 ORTHO05D000656 1.1e-06 58.5 42 78.6
TAR633G2694 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.1e-06 58.5 259 24.3
AL1G63190 Arabidopsis lyrata HOM05D008309 ORTHO05D010308 1.5e-06 58.2 205 28.8
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.5e-06 58.2 234 25.2
MBI18_g39412_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.5e-06 58.2 121 29.8
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-06 58.2 228 22.8
TPR.G3822 Trifolium pratense HOM05D002954 ORTHO05D003353 1.5e-06 58.2 147 28.6
arahy.Tifrunner.gnm1.ann1.35BP8C Arachis hypogaea HOM05D009662 ORTHO05D003353 1.9e-06 57.8 187 28.9
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 1.9e-06 57.8 207 24.6
Lalb_Chr23g0267011 Lupinus albus HOM05D000838 ORTHO05D000656 1.9e-06 57.8 86 47.7
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-06 57.8 177 27.1
Nitab4.5_0006180g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.9e-06 57.8 131 26.7
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.5e-06 57.4 234 25.2
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.5e-06 57.4 208 24.0
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 3.3e-06 57.0 212 24.1
Peaxi162Scf00024g00071 Petunia axillaris HOM05D002954 ORTHO05D003353 3.3e-06 57.0 140 37.1
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.3e-06 56.6 234 24.8
MBI16_g34941_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.3e-06 56.6 87 32.2
Nitab4.5_0000386g0150 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.3e-06 56.6 98 30.6
Nitab4.5_0000416g0230 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.3e-06 56.6 100 36.0
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 5.6e-06 56.2 228 23.2
A09p53580 Brassica napus HOM05D008309 ORTHO05D010308 7.3e-06 55.8 158 28.5
FvH4_4g08651 Fragaria vesca HOM05D000539 ORTHO05D000233 7.3e-06 55.8 166 26.5
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.5e-06 55.5 155 28.4
Nitab4.5_0006077g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.5e-06 55.5 99 31.3
Nitab4.5_0007501g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.5e-06 55.5 92 35.9


User provided reference genes

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